Strain diversity in Mycobacterium avium subsp. paratuberculosis-positive bovine fecal samples collected in Switzerland Article Swipe
Melina Rasper-Hössinger
,
Michael Biggel
,
Roger Stephan
,
Frauke Seehusen
,
Simone Scherrer
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.3389/fvets.2023.1154516
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.3389/fvets.2023.1154516
Paratuberculosis or Johne’s disease is a chronic intestinal disease in domestic and wild ruminants. It affects global dairy economy and is caused by Mycobacterium avium subsp. paratuberculosis (MAP). The objective of this study was to analyze strain diversity in MAP-positive fecal samples by using a particular single nucleotide polymorphism (SNP) distinguishing between cattle (C-) and sheep (S-) type MAP and analysis of SNPs within gyrA and gyrB genes differentiating between Types I, II, and III. Moreover, mycobacterial interspersed repetitive unit and variable-number tandem repeat (MIRU-VNTR) analysis using eight established loci was performed. A total of 90 fecal samples from diseased animals presenting diarrhea and/or weight loss, originating from 59 bovine herds across 16 cantons of Switzerland were screened by PCR for the MAP-specific F57 and IS 900 genes and were further subtyped. 96.7% and 3.3% of the samples contained C- and S-type MAP, respectively. Ten INRA Nouzilly MIRU-VNTR (INMV) profiles, with a discriminatory index of 0.802, calculated based on 65 epidemiological independent genotypes, were detected: INMV 1 (33.8%), INMV 2 (23.1%), INMV 6 (16.9%), INMV 9 (9.2%), INMV 116 (4.6%), INMV 3 (3.1%), INMV 5 (3.1%) and INMV 72 (1.5%), including two novel INMV profiles, namely INMV 253 (3.1%; S-type III) and INMV 252 (1.5%; C-type). INMV 1, INMV 2, and INMV 6 comprised almost 75% of the F57- and IS 900- positive samples. Typing data from 11 herds suggest that there are some herds with intra-herd diversity of genotypes. The results of this study indicate a heterogeneity of MAP in Switzerland.
Related Topics
Concepts
Paratuberculosis
Biology
Feces
Herd
Typing
Genotype
Veterinary medicine
Single-nucleotide polymorphism
Microbiology
Mycobacterium
Virology
Genetics
Gene
Bacteria
Animal science
Medicine
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3389/fvets.2023.1154516
- https://www.frontiersin.org/articles/10.3389/fvets.2023.1154516/pdf
- OA Status
- gold
- Cited By
- 8
- References
- 34
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4367053408
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4367053408Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.3389/fvets.2023.1154516Digital Object Identifier
- Title
-
Strain diversity in Mycobacterium avium subsp. paratuberculosis-positive bovine fecal samples collected in SwitzerlandWork title
- Type
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articleOpenAlex work type
- Language
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enPrimary language
- Publication year
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2023Year of publication
- Publication date
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2023-04-26Full publication date if available
- Authors
-
Melina Rasper-Hössinger, Michael Biggel, Roger Stephan, Frauke Seehusen, Simone ScherrerList of authors in order
- Landing page
-
https://doi.org/10.3389/fvets.2023.1154516Publisher landing page
- PDF URL
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https://www.frontiersin.org/articles/10.3389/fvets.2023.1154516/pdfDirect link to full text PDF
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YesWhether a free full text is available
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goldOpen access status per OpenAlex
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https://www.frontiersin.org/articles/10.3389/fvets.2023.1154516/pdfDirect OA link when available
- Concepts
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Paratuberculosis, Biology, Feces, Herd, Typing, Genotype, Veterinary medicine, Single-nucleotide polymorphism, Microbiology, Mycobacterium, Virology, Genetics, Gene, Bacteria, Animal science, MedicineTop concepts (fields/topics) attached by OpenAlex
- Cited by
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8Total citation count in OpenAlex
- Citations by year (recent)
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2025: 4, 2024: 3, 2023: 1Per-year citation counts (last 5 years)
- References (count)
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34Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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