Supplementary Tables from DNA Methylation Epitypes of Burkitt Lymphoma with Distinct Molecular and Clinical Features Article Swipe

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Nicole Thomas , Carlos A. García‐Prieto , Kostiantyn Dreval , Laura K. Hilton , Jeremy S. Abramson , Nancy L. Bartlett , Jeffrey Bethony , Jay Bowen , Anthony C. Bryan , Corey Casper , Maureen A. Dyer , Julie M. Gastier‐Foster , Alina S. Gerrie , Timothy C. Greiner , Nicholas B. Griner , Thomas G. Gross , Nancy L. Harris , John D. Irvin , Elaine S. Jaffe , Fábio E. Leal , Sam M. Mbulaiteye , Charles G. Mullighan , Andrew J. Mungall , Karen Mungall , Constance Namirembe , Ariela Noy , Martin Ogwang , Jackson Orem , German Ott , Hilary Petrello , Steven J. Reynolds , Steven H. Swerdlow , Alexandra Traverse‐Glehen , Wyndham H. Wilson , Marco A. Marra , Louis M. Staudt , David W. Scott , Manel Esteller , Ryan D. Morin ·

YOU? · · 2025 · Open Access · · DOI: https://doi.org/10.1158/2643-3230.29444332

S1. DMRs EBVpos vs CB S2. DMRs EBVneg vs CB S3. Shared DMRs EBV S4. DMRs EBV status S5. Methylation gene corrs EB S6. GO pathways enrichment S7. LPS selected probes S8. Epitype assignment S9. DMRs eptiype S10. DMR gene corrs epitype S11. JASPAR TF results epitype S12. JASPAR TF results EBV S13. aSHM epitype S14. DEG epitpye S15. SignatureDB pathways enrichment

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Lymphoma

Dna

Computational Biology

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DNA methylation Lymphoma DNA Computational biology Methylation Cancer research Biology Computer science Genetics Gene Immunology Gene expression

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Type: supplementary-materials
Language: en
Landing Page: https://doi.org/10.1158/2643-3230.29444332
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Title: Supplementary Tables from DNA Methylation Epitypes of Burkitt Lymphoma with Distinct Molecular and Clinical Features

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Publication year: 2025

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Authors: Nicole Thomas, Carlos A. García‐Prieto, Kostiantyn Dreval, Laura K. Hilton, Jeremy S. Abramson, Nancy L. Bartlett, Jeffrey Bethony, Jay Bowen, Anthony C. Bryan, Corey Casper, Maureen A. Dyer, Julie M. Gastier‐Foster, Alina S. Gerrie, Timothy C. Greiner, Nicholas B. Griner, Thomas G. Gross, Nancy L. Harris, John D. Irvin, Elaine S. Jaffe, Fábio E. Leal, Sam M. Mbulaiteye, Charles G. Mullighan, Andrew J. Mungall, Karen Mungall, Constance Namirembe, Ariela Noy, Martin Ogwang, Jackson Orem, German Ott, Hilary Petrello, Steven J. Reynolds, Steven H. Swerdlow, Alexandra Traverse‐Glehen, Wyndham H. Wilson, Marco A. Marra, Louis M. Staudt, David W. Scott, Manel Esteller, Ryan D. Morin

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Concepts: DNA methylation, Lymphoma, DNA, Computational biology, Methylation, Cancer research, Biology, Computer science, Genetics, Gene, Immunology, Gene expression

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best_oa_location.license	cc-by
best_oa_location.pdf_url
best_oa_location.version	acceptedVersion
best_oa_location.raw_type	posted-content
best_oa_location.license_id	https://openalex.org/licenses/cc-by
best_oa_location.is_accepted	True
best_oa_location.is_published	False
best_oa_location.raw_source_name
best_oa_location.landing_page_url	https://doi.org/10.1158/2643-3230.29444332
primary_location.id	doi:10.1158/2643-3230.29444332
primary_location.is_oa	True
primary_location.source
primary_location.license	cc-by
primary_location.pdf_url
primary_location.version	acceptedVersion
primary_location.raw_type	posted-content
primary_location.license_id	https://openalex.org/licenses/cc-by
primary_location.is_accepted	True
primary_location.is_published	False
primary_location.raw_source_name
primary_location.landing_page_url	https://doi.org/10.1158/2643-3230.29444332
publication_date	2025-07-01
publication_year	2025
referenced_works_count	0
abstract_inverted_index.CB	4, 9
abstract_inverted_index.EB	22
abstract_inverted_index.GO	24
abstract_inverted_index.TF	44, 49
abstract_inverted_index.vs	3, 8
abstract_inverted_index.DEG	56
abstract_inverted_index.DMR	38
abstract_inverted_index.EBV	13, 16, 51
abstract_inverted_index.LPS	28
abstract_inverted_index.S2.	5
abstract_inverted_index.S3.	10
abstract_inverted_index.S4.	14
abstract_inverted_index.S5.	18
abstract_inverted_index.S6.	23
abstract_inverted_index.S7.	27
abstract_inverted_index.S8.	31
abstract_inverted_index.S9.	34
abstract_inverted_index.DMRs	1, 6, 12, 15, 35
abstract_inverted_index.S10.	37
abstract_inverted_index.S11.	42
abstract_inverted_index.S12.	47
abstract_inverted_index.S13.	52
abstract_inverted_index.S14.	55
abstract_inverted_index.S15.	58
abstract_inverted_index.aSHM	53
abstract_inverted_index.gene	20, 39
abstract_inverted_index.corrs	21, 40
abstract_inverted_index.EBVneg	7
abstract_inverted_index.EBVpos	2
abstract_inverted_index.JASPAR	43, 48
abstract_inverted_index.Shared	11
abstract_inverted_index.probes	30
abstract_inverted_index.status	17
abstract_inverted_index.Epitype	32
abstract_inverted_index.epitpye	57
abstract_inverted_index.epitype	41, 46, 54
abstract_inverted_index.eptiype	36
abstract_inverted_index.results	45, 50
abstract_inverted_index.pathways	25, 60
abstract_inverted_index.selected	29
abstract_inverted_index.assignment	33
abstract_inverted_index.enrichment	26
abstract_inverted_index.Methylation	19
abstract_inverted_index.SignatureDB	59
abstract_inverted_index.<p>S1.	0
abstract_inverted_index.enrichment</p>	61
cited_by_percentile_year
countries_distinct_count	0
institutions_distinct_count	39
citation_normalized_percentile.value	0.39260156
citation_normalized_percentile.is_in_top_1_percent	False
citation_normalized_percentile.is_in_top_10_percent	False