The diversification and potential function of microbiome in sediment-water interface of methane seeps in South China Sea Article Swipe
Lulu Fu
,
Yanjun Liu
,
Minxiao Wang
,
Chao Lian
,
Lei Cao
,
Wei‐Cheng Wang
,
Yan Sun
,
Nan Wang
,
Chaolun Li
·
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3389/fmicb.2024.1287147
YOU?
·
· 2024
· Open Access
·
· DOI: https://doi.org/10.3389/fmicb.2024.1287147
The sediment-water interfaces of cold seeps play important roles in nutrient transportation between seafloor and deep-water column. Microorganisms are the key actors of biogeochemical processes in this interface. However, the knowledge of the microbiome in this interface are limited. Here we studied the microbial diversity and potential metabolic functions by 16S rRNA gene amplicon sequencing at sediment-water interface of two active cold seeps in the northern slope of South China Sea, Lingshui and Site F cold seeps. The microbial diversity and potential functions in the two cold seeps are obviously different. The microbial diversity of Lingshui interface areas, is found to be relatively low. Microbes associated with methane consumption are enriched, possibly due to the large and continuous eruptions of methane fluids. Methane consumption is mainly mediated by aerobic oxidation and denitrifying anaerobic methane oxidation (DAMO). The microbial diversity in Site F is higher than Lingshui. Fluids from seepage of Site F are mitigated by methanotrophic bacteria at the cyclical oxic-hypoxic fluctuating interface where intense redox cycling of carbon, sulfur, and nitrogen compounds occurs. The primary modes of microbial methane consumption are aerobic methane oxidation, along with DAMO, sulfate-dependent anaerobic methane oxidation (SAMO). To sum up, anaerobic oxidation of methane (AOM) may be underestimated in cold seep interface microenvironments. Our findings highlight the significance of AOM and interdependence between microorganisms and their environments in the interface microenvironments, providing insights into the biogeochemical processes that govern these unique ecological systems.
Related Topics
Concepts
Anaerobic oxidation of methane
Biogeochemical cycle
Environmental chemistry
Methane
Cold seep
Water column
Archaea
Sediment
Methanogenesis
Biogeochemistry
Microbial mat
Denitrifying bacteria
Environmental science
Microbiome
Ecology
Biology
Chemistry
Denitrification
Bacteria
Nitrogen
Organic chemistry
Bioinformatics
Paleontology
Genetics
Cyanobacteria
Metadata
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.3389/fmicb.2024.1287147
- https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1287147/pdf
- OA Status
- gold
- Cited By
- 5
- References
- 69
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4391565189
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4391565189Canonical identifier for this work in OpenAlex
- DOI
-
https://doi.org/10.3389/fmicb.2024.1287147Digital Object Identifier
- Title
-
The diversification and potential function of microbiome in sediment-water interface of methane seeps in South China SeaWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2024Year of publication
- Publication date
-
2024-02-06Full publication date if available
- Authors
-
Lulu Fu, Yanjun Liu, Minxiao Wang, Chao Lian, Lei Cao, Wei‐Cheng Wang, Yan Sun, Nan Wang, Chaolun LiList of authors in order
- Landing page
-
https://doi.org/10.3389/fmicb.2024.1287147Publisher landing page
- PDF URL
-
https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1287147/pdfDirect link to full text PDF
- Open access
-
YesWhether a free full text is available
- OA status
-
goldOpen access status per OpenAlex
- OA URL
-
https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2024.1287147/pdfDirect OA link when available
- Concepts
-
Anaerobic oxidation of methane, Biogeochemical cycle, Environmental chemistry, Methane, Cold seep, Water column, Archaea, Sediment, Methanogenesis, Biogeochemistry, Microbial mat, Denitrifying bacteria, Environmental science, Microbiome, Ecology, Biology, Chemistry, Denitrification, Bacteria, Nitrogen, Organic chemistry, Bioinformatics, Paleontology, Genetics, CyanobacteriaTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
5Total citation count in OpenAlex
- Citations by year (recent)
-
2025: 3, 2024: 2Per-year citation counts (last 5 years)
- References (count)
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69Number of works referenced by this work
- Related works (count)
-
10Other works algorithmically related by OpenAlex
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