The FoodBAll online resources to support discovery of novel dietary biomarkers with metabolomics Article Swipe
Jarlei Fiamoncini
,
Christoph H. Weinert
,
Lars Ove Dragsted
,
Franck Giacomoni
,
Craig Knox
,
Sabine E. Kulling
,
Rafaël Llorach
,
Vanessa Neveu
,
Giulia Praticò
,
Estelle Pujos‐Guillot
,
Albert Remus R. Rosana
,
Joseph A. Rothwell
,
Tehzeeb Sayed
,
Marynka Ulaszewska
,
Mireia Urpí-Sardá
,
Edith J. M. Feskens
,
Augustin Scalbert
,
David S. Wishart
,
Claudine Manach
·
YOU?
·
· 2016
· Open Access
·
YOU?
·
· 2016
· Open Access
·
One of the aims of the FoodBAll (Food Biomarkers Alliance) project (http://foodmetabolome.org) is to develop the missing tools and resources to facilitate the identification of food intake biomarkers \nusing metabolomics. A compound database with extensive coverage of the food metabolome and \na food intake biomarkers database were identified as the priority needs. The most comprehensive \ndatabase on food constituents and their chemical and biological data, FooDB (www.foodb.ca), as well \nas the expert-curated database PhytoHub (www.phytohub.eu) focused on dietary phytochemicals \nare being enriched to include new contents on food non-nutrients and their human metabolites, \nincluding the known metabolites described in the literature and in silico predicted metabolites. \nIn parallel, a new database, Exposome-Explorer, is being developed to include all known dietary \nbiomarkers (currently n=142) and rich information on their measurement in various populations. \nBeyond databases, the lack of commercial standards for food-derived metabolites is another \nmajor limitation in nutritional metabolomics. FoodComEx (Food Compound Exchange, http:// \nfoodcomex.org) is a new chemical library initiated to facilitate the sharing of not easily accessible \nstandards for diet-related compounds. FoodComEx is an online catalog of pure compounds made \navailable by academic laboratories. Compounds are stored in the laboratory where they have \nbeen isolated or synthetized. Anyone interested in one compound can contact the provider and a \nbilateral negotiation will define the terms of collaboration, within the rules defined in a charter of \ngood practices. FoodComEx is a collaborative initiative widely open to new contributors and users. \nAnother resource developed in the FoodBAll project is a web portal (http://foodmetabolome.org/ \nwpkg4) which presents and links to the most useful tools, databases, libraries of spectra, softwares \nfor nutritional metabolomics and dietary biomarker discovery, and will propose tutorials, webinars, \nand news related to the Food metabolome. Funding: JPI HDHL FoodBAll project (2014-2017)
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- http://hdl.handle.net/10449/51489
- http://hdl.handle.net/10449/51489
- OA Status
- green
- Cited By
- 1
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W2903888379
All OpenAlex metadata
Raw OpenAlex JSON
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https://openalex.org/W2903888379Canonical identifier for this work in OpenAlex
- Title
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The FoodBAll online resources to support discovery of novel dietary biomarkers with metabolomicsWork title
- Type
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preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
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2016Year of publication
- Publication date
-
2016-01-01Full publication date if available
- Authors
-
Jarlei Fiamoncini, Christoph H. Weinert, Lars Ove Dragsted, Franck Giacomoni, Craig Knox, Sabine E. Kulling, Rafaël Llorach, Vanessa Neveu, Giulia Praticò, Estelle Pujos‐Guillot, Albert Remus R. Rosana, Joseph A. Rothwell, Tehzeeb Sayed, Marynka Ulaszewska, Mireia Urpí-Sardá, Edith J. M. Feskens, Augustin Scalbert, David S. Wishart, Claudine ManachList of authors in order
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https://hdl.handle.net/10449/51489Publisher landing page
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https://hdl.handle.net/10449/51489Direct link to full text PDF
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-
YesWhether a free full text is available
- OA status
-
greenOpen access status per OpenAlex
- OA URL
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https://hdl.handle.net/10449/51489Direct OA link when available
- Concepts
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Metabolomics, Computer science, Computational biology, Bioinformatics, BiologyTop concepts (fields/topics) attached by OpenAlex
- Cited by
-
1Total citation count in OpenAlex
- Citations by year (recent)
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2021: 1Per-year citation counts (last 5 years)
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.spectra, | 247 |
| abstract_inverted_index.Alliance) | 9 |
| abstract_inverted_index.Compounds | 173 |
| abstract_inverted_index.Exchange, | 142 |
| abstract_inverted_index.FoodComEx | 139, 161, 212 |
| abstract_inverted_index.biomarker | 253 |
| abstract_inverted_index.compounds | 168 |
| abstract_inverted_index.database, | 103 |
| abstract_inverted_index.described | 91 |
| abstract_inverted_index.developed | 107, 225 |
| abstract_inverted_index.extensive | 33 |
| abstract_inverted_index.initiated | 149 |
| abstract_inverted_index.libraries | 245 |
| abstract_inverted_index.parallel, | 100 |
| abstract_inverted_index.predicted | 98 |
| abstract_inverted_index.resources | 19 |
| abstract_inverted_index.standards | 129 |
| abstract_inverted_index.(currently | 113 |
| abstract_inverted_index.Biomarkers | 8 |
| abstract_inverted_index.biological | 60 |
| abstract_inverted_index.biomarkers | 42 |
| abstract_inverted_index.commercial | 128 |
| abstract_inverted_index.compounds. | 160 |
| abstract_inverted_index.databases, | 124, 244 |
| abstract_inverted_index.discovery, | 254 |
| abstract_inverted_index.facilitate | 21, 151 |
| abstract_inverted_index.identified | 45 |
| abstract_inverted_index.initiative | 216 |
| abstract_inverted_index.interested | 186 |
| abstract_inverted_index.laboratory | 178 |
| abstract_inverted_index.limitation | 135 |
| abstract_inverted_index.literature | 94 |
| abstract_inverted_index.metabolome | 38 |
| abstract_inverted_index.practices. | 211 |
| abstract_inverted_index.tutorials, | 258 |
| abstract_inverted_index.(2014-2017) | 271 |
| abstract_inverted_index.and \na | 39 |
| abstract_inverted_index.information | 117 |
| abstract_inverted_index.measurement | 120 |
| abstract_inverted_index.metabolites | 90, 132 |
| abstract_inverted_index.metabolome. | 265 |
| abstract_inverted_index.negotiation | 196 |
| abstract_inverted_index.nutritional | 137, 249 |
| abstract_inverted_index.constituents | 55 |
| abstract_inverted_index.contributors | 221 |
| abstract_inverted_index.diet-related | 159 |
| abstract_inverted_index.food-derived | 131 |
| abstract_inverted_index.metabolomics | 250 |
| abstract_inverted_index.synthetized. | 184 |
| abstract_inverted_index.collaborative | 215 |
| abstract_inverted_index.laboratories. | 172 |
| abstract_inverted_index.metabolomics. | 28, 138 |
| abstract_inverted_index.non-nutrients | 83 |
| abstract_inverted_index.of \ngood | 210 |
| abstract_inverted_index.well \nas | 65 |
| abstract_inverted_index.collaboration, | 202 |
| abstract_inverted_index.expert-curated | 67 |
| abstract_inverted_index.identification | 23 |
| abstract_inverted_index.(www.foodb.ca), | 63 |
| abstract_inverted_index.have \nbeen | 181 |
| abstract_inverted_index.(www.phytohub.eu) | 70 |
| abstract_inverted_index.a \nbilateral | 195 |
| abstract_inverted_index.Exposome-Explorer, | 104 |
| abstract_inverted_index.another \nmajor | 134 |
| abstract_inverted_index.softwares \nfor | 248 |
| abstract_inverted_index.webinars, \nand | 259 |
| abstract_inverted_index.made \navailable | 169 |
| abstract_inverted_index.users. \nAnother | 223 |
| abstract_inverted_index.metabolites. \nIn | 99 |
| abstract_inverted_index.biomarkers \nusing | 27 |
| abstract_inverted_index.dietary \nbiomarkers | 112 |
| abstract_inverted_index.phytochemicals \nare | 74 |
| abstract_inverted_index.populations. \nBeyond | 123 |
| abstract_inverted_index.accessible \nstandards | 157 |
| abstract_inverted_index.(http://foodmetabolome.org) | 11 |
| abstract_inverted_index.comprehensive \ndatabase | 52 |
| abstract_inverted_index.http:// \nfoodcomex.org) | 143 |
| abstract_inverted_index.metabolites, \nincluding | 87 |
| abstract_inverted_index.(http://foodmetabolome.org/ \nwpkg4) | 234 |
| cited_by_percentile_year.max | 93 |
| cited_by_percentile_year.min | 89 |
| countries_distinct_count | 7 |
| institutions_distinct_count | 19 |
| sustainable_development_goals[0].id | https://metadata.un.org/sdg/2 |
| sustainable_development_goals[0].score | 0.8299999833106995 |
| sustainable_development_goals[0].display_name | Zero hunger |
| citation_normalized_percentile.value | 0.18495865 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |