The Serine Variant of the Redox Glycine CO2 Assimilation Pathway in an Anaerobic Thermophile Parvivirga hydrogeniphila Article Swipe
YOU?
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· 2025
· Open Access
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· DOI: https://doi.org/10.1134/s0026261725602623
Parvivirga hydrogeniphila , strain Es71-Z0120 is a thermophilic bacterium capable of anaerobic growth within the ranges of 25–70°C (optimum at 47–60°C) and pH 6.0–8.5 (optimum at 6.8–7.2) and using H 2 or formate as electron donors and Fe(III) as an acceptor. Genomic analysis revealed the genes of the serine branch of the reductive glycine pathway, while glycine reductase genes were not found. Proteomic studies showed enhanced expression of other key enzymes of this pathway: formate dehydrogenase, methyltetrahydrofolate cyclohydrolase, the glycine cleavage system, and serine hydroxymethyl transferase. The rate of autotrophic carbon assimilation was 0.357 fmol C/(cell day), which was comparable to the values for the known autotrophic microorganisms. These results indicate autotrophic CO 2 assimilation in P. hydrogeniphila , with the serine variant of the reductive glycine pathway being the most probable one. They contribute to our understanding of the metabolic diversity of anaerobic microorganisms and broaden our knowledge of the distribution of various carbon assimilation mechanisms in the microorganisms belonging to the newly desrcibed phylogenetic groups.
Related Topics
- Type
- article
- Language
- en
- Landing Page
- https://doi.org/10.1134/s0026261725602623
- https://link.springer.com/content/pdf/10.1134/S0026261725602623.pdf
- OA Status
- hybrid
- References
- 12
- OpenAlex ID
- https://openalex.org/W7105855693
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W7105855693Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1134/s0026261725602623Digital Object Identifier
- Title
-
The Serine Variant of the Redox Glycine CO2 Assimilation Pathway in an Anaerobic Thermophile Parvivirga hydrogeniphilaWork title
- Type
-
articleOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2025Year of publication
- Publication date
-
2025-11-17Full publication date if available
- Authors
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N. A. Chernyh, I. I. Rusanov, V. A. PikhterevaList of authors in order
- Landing page
-
https://doi.org/10.1134/s0026261725602623Publisher landing page
- PDF URL
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https://link.springer.com/content/pdf/10.1134/S0026261725602623.pdfDirect link to full text PDF
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YesWhether a free full text is available
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hybridOpen access status per OpenAlex
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https://link.springer.com/content/pdf/10.1134/S0026261725602623.pdfDirect OA link when available
- Concepts
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Serine, Biochemistry, Formate, Assimilation (phonology), Glycine, Thermophile, Autotroph, Biology, Anaerobic exercise, Formate dehydrogenase, Serine hydroxymethyltransferase, Amino acid, Chemistry, Microorganism, Enzyme, Metabolic pathway, Amino acid synthesis, Nitrogen assimilation, Bacteria, Metabolism, Oxygenase, Biosynthesis, Anaerobic bacteria, Phylogenetic diversity, Glycine cleavage system, Electron transport chainTop concepts (fields/topics) attached by OpenAlex
- Cited by
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0Total citation count in OpenAlex
- References (count)
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12Number of works referenced by this work
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| abstract_inverted_index.at | 20, 26 |
| abstract_inverted_index.in | 116, 158 |
| abstract_inverted_index.is | 6 |
| abstract_inverted_index.of | 11, 17, 47, 51, 68, 72, 89, 124, 139, 143, 150, 153 |
| abstract_inverted_index.or | 32 |
| abstract_inverted_index.pH | 23 |
| abstract_inverted_index.to | 101, 136, 162 |
| abstract_inverted_index.The | 87 |
| abstract_inverted_index.and | 22, 28, 37, 83, 146 |
| abstract_inverted_index.for | 104 |
| abstract_inverted_index.key | 70 |
| abstract_inverted_index.not | 61 |
| abstract_inverted_index.our | 137, 148 |
| abstract_inverted_index.the | 15, 45, 48, 52, 79, 102, 105, 121, 125, 130, 140, 151, 159, 163 |
| abstract_inverted_index.was | 93, 99 |
| abstract_inverted_index.They | 134 |
| abstract_inverted_index.fmol | 95 |
| abstract_inverted_index.most | 131 |
| abstract_inverted_index.one. | 133 |
| abstract_inverted_index.rate | 88 |
| abstract_inverted_index.this | 73 |
| abstract_inverted_index.were | 60 |
| abstract_inverted_index.with | 120 |
| abstract_inverted_index.0.357 | 94 |
| abstract_inverted_index.These | 109 |
| abstract_inverted_index.being | 129 |
| abstract_inverted_index.day), | 97 |
| abstract_inverted_index.genes | 46, 59 |
| abstract_inverted_index.known | 106 |
| abstract_inverted_index.newly | 164 |
| abstract_inverted_index.other | 69 |
| abstract_inverted_index.using | 29 |
| abstract_inverted_index.which | 98 |
| abstract_inverted_index.while | 56 |
| abstract_inverted_index.branch | 50 |
| abstract_inverted_index.carbon | 91, 155 |
| abstract_inverted_index.donors | 36 |
| abstract_inverted_index.found. | 62 |
| abstract_inverted_index.growth | 13 |
| abstract_inverted_index.ranges | 16 |
| abstract_inverted_index.serine | 49, 84, 122 |
| abstract_inverted_index.showed | 65 |
| abstract_inverted_index.strain | 4 |
| abstract_inverted_index.values | 103 |
| abstract_inverted_index.within | 14 |
| abstract_inverted_index.C/(cell | 96 |
| abstract_inverted_index.Fe(III) | 38 |
| abstract_inverted_index.Genomic | 42 |
| abstract_inverted_index.broaden | 147 |
| abstract_inverted_index.capable | 10 |
| abstract_inverted_index.enzymes | 71 |
| abstract_inverted_index.formate | 33, 75 |
| abstract_inverted_index.glycine | 54, 57, 80, 127 |
| abstract_inverted_index.groups. | 167 |
| abstract_inverted_index.pathway | 128 |
| abstract_inverted_index.results | 110 |
| abstract_inverted_index.studies | 64 |
| abstract_inverted_index.system, | 82 |
| abstract_inverted_index.variant | 123 |
| abstract_inverted_index.various | 154 |
| abstract_inverted_index.(optimum | 19, 25 |
| abstract_inverted_index.Abstract | 0 |
| abstract_inverted_index.analysis | 43 |
| abstract_inverted_index.cleavage | 81 |
| abstract_inverted_index.electron | 35 |
| abstract_inverted_index.enhanced | 66 |
| abstract_inverted_index.indicate | 111 |
| abstract_inverted_index.pathway, | 55 |
| abstract_inverted_index.pathway: | 74 |
| abstract_inverted_index.probable | 132 |
| abstract_inverted_index.revealed | 44 |
| abstract_inverted_index.6.0–8.5 | 24 |
| abstract_inverted_index.Proteomic | 63 |
| abstract_inverted_index.acceptor. | 41 |
| abstract_inverted_index.anaerobic | 12, 144 |
| abstract_inverted_index.bacterium | 9 |
| abstract_inverted_index.belonging | 161 |
| abstract_inverted_index.desrcibed | 165 |
| abstract_inverted_index.diversity | 142 |
| abstract_inverted_index.knowledge | 149 |
| abstract_inverted_index.metabolic | 141 |
| abstract_inverted_index.reductase | 58 |
| abstract_inverted_index.reductive | 53, 126 |
| abstract_inverted_index.25–70°C | 18 |
| abstract_inverted_index.6.8–7.2) | 27 |
| abstract_inverted_index.Es71-Z0120 | 5 |
| abstract_inverted_index.Parvivirga | 1 |
| abstract_inverted_index.comparable | 100 |
| abstract_inverted_index.contribute | 135 |
| abstract_inverted_index.expression | 67 |
| abstract_inverted_index.mechanisms | 157 |
| abstract_inverted_index.47–60°C) | 21 |
| abstract_inverted_index.autotrophic | 90, 107, 112 |
| abstract_inverted_index.assimilation | 92, 115, 156 |
| abstract_inverted_index.distribution | 152 |
| abstract_inverted_index.phylogenetic | 166 |
| abstract_inverted_index.thermophilic | 8 |
| abstract_inverted_index.transferase. | 86 |
| abstract_inverted_index.hydroxymethyl | 85 |
| abstract_inverted_index.understanding | 138 |
| abstract_inverted_index.dehydrogenase, | 76 |
| abstract_inverted_index.hydrogeniphila | 2, 118 |
| abstract_inverted_index.microorganisms | 145, 160 |
| abstract_inverted_index.cyclohydrolase, | 78 |
| abstract_inverted_index.microorganisms. | 108 |
| abstract_inverted_index.methyltetrahydrofolate | 77 |
| cited_by_percentile_year | |
| countries_distinct_count | 1 |
| institutions_distinct_count | 3 |
| citation_normalized_percentile.value | 0.73782183 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | False |