Two-million-year-old microbial communities from the Kap København Formation in North Greenland Article Swipe
Antonio Fernàndez-Guerra
,
Guillaume Borrel
,
Tom O. Delmont
,
Bo Elberling
,
A. Murat Eren
,
Simonetta Gribaldo
,
Annika Jochheim
,
Rasmus Amund Henriksen
,
Kai‐Uwe Hinrichs
,
Thorfinn Sand Korneliussen
,
Mart Krupovìč
,
Nicolaj K. Larsen
,
Rafael Laso-Pérez
,
Mikkel Winther Pedersen
,
Vivi Kathrine Pedersen
,
Karina K. Sand
,
Martin Sikora
,
Martin Steinegger
,
Iva Veseli
,
Lars Wörmer
,
Lei Zhao
,
Marina Žure
,
Kurt H. Kjær
,
Eske Willerslev
·
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.06.10.544454
YOU?
·
· 2023
· Open Access
·
· DOI: https://doi.org/10.1101/2023.06.10.544454
Summary Environmental DNA (eDNA) from the 2-million-year-old Kap København Formation of northern Greenland has revealed an ecosystem of plants and animals with no contemporary analogue 1 . Here, we reconstruct the microbial (bacterial, archaeal, and viral) communities that thrived at the site during this time. By leveraging a novel analytical framework that integrates taxonomic profiling, DNA damage estimates, and functional reconstructions, we identify and distinguish pioneer microbial communities from later permafrost microbial assemblages. We show that at the time of sediment deposition, the terrestrial input at the Kap København site originated from a palustrine wetland, suggesting warmer, non-permafrost conditions. During this period, the detection of methanogenic archaea and signals of their carbon metabolism is consistent with Kap København and similar northern ecosystems contributing moderate methane emissions. Intriguingly, we discover a remarkable nucleotide sequence similarity—exceeding 98%—between pioneer methanogens and present-day analogues in thawing permafrost. This aligns with the concept of “time-traveling” microbes 2 surviving across geological time and waiting for conditions to turn favourable rather than evolving to adapt to changing conditions. Importantly, in contrast to the plant and animal communities of the Kap København, a striking similarity in microbial composition to that of a contemporary thawing Arctic suggests that microbial communities may serve as the first indication of broader climate-driven ecosystem disruptions.
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Metadata
- Type
- preprint
- Language
- en
- Landing Page
- https://doi.org/10.1101/2023.06.10.544454
- https://www.biorxiv.org/content/biorxiv/early/2023/06/12/2023.06.10.544454.full.pdf
- OA Status
- green
- Cited By
- 16
- References
- 114
- Related Works
- 10
- OpenAlex ID
- https://openalex.org/W4380268622
All OpenAlex metadata
Raw OpenAlex JSON
- OpenAlex ID
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https://openalex.org/W4380268622Canonical identifier for this work in OpenAlex
- DOI
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https://doi.org/10.1101/2023.06.10.544454Digital Object Identifier
- Title
-
Two-million-year-old microbial communities from the Kap København Formation in North GreenlandWork title
- Type
-
preprintOpenAlex work type
- Language
-
enPrimary language
- Publication year
-
2023Year of publication
- Publication date
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2023-06-10Full publication date if available
- Authors
-
Antonio Fernàndez-Guerra, Guillaume Borrel, Tom O. Delmont, Bo Elberling, A. Murat Eren, Simonetta Gribaldo, Annika Jochheim, Rasmus Amund Henriksen, Kai‐Uwe Hinrichs, Thorfinn Sand Korneliussen, Mart Krupovìč, Nicolaj K. Larsen, Rafael Laso-Pérez, Mikkel Winther Pedersen, Vivi Kathrine Pedersen, Karina K. Sand, Martin Sikora, Martin Steinegger, Iva Veseli, Lars Wörmer, Lei Zhao, Marina Žure, Kurt H. Kjær, Eske WillerslevList of authors in order
- Landing page
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https://doi.org/10.1101/2023.06.10.544454Publisher landing page
- PDF URL
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https://www.biorxiv.org/content/biorxiv/early/2023/06/12/2023.06.10.544454.full.pdfDirect link to full text PDF
- Open access
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YesWhether a free full text is available
- OA status
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greenOpen access status per OpenAlex
- OA URL
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https://www.biorxiv.org/content/biorxiv/early/2023/06/12/2023.06.10.544454.full.pdfDirect OA link when available
- Concepts
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Permafrost, Wetland, Metagenomics, Ecology, Archaea, Climate change, Ecological succession, Adaptability, Microbial ecology, Geography, Biology, Paleontology, Bacteria, Gene, BiochemistryTop concepts (fields/topics) attached by OpenAlex
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16Total citation count in OpenAlex
- Citations by year (recent)
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2025: 9, 2024: 5, 2023: 2Per-year citation counts (last 5 years)
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114Number of works referenced by this work
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10Other works algorithmically related by OpenAlex
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| abstract_inverted_index.detection | 103 |
| abstract_inverted_index.ecosystem | 16, 210 |
| abstract_inverted_index.framework | 50 |
| abstract_inverted_index.microbial | 31, 66, 71, 188, 199 |
| abstract_inverted_index.surviving | 152 |
| abstract_inverted_index.taxonomic | 53 |
| abstract_inverted_index.København | 8, 88, 117 |
| abstract_inverted_index.analytical | 49 |
| abstract_inverted_index.conditions | 159 |
| abstract_inverted_index.consistent | 114 |
| abstract_inverted_index.ecosystems | 121 |
| abstract_inverted_index.emissions. | 125 |
| abstract_inverted_index.estimates, | 57 |
| abstract_inverted_index.favourable | 162 |
| abstract_inverted_index.functional | 59 |
| abstract_inverted_index.geological | 154 |
| abstract_inverted_index.indication | 206 |
| abstract_inverted_index.integrates | 52 |
| abstract_inverted_index.leveraging | 46 |
| abstract_inverted_index.metabolism | 112 |
| abstract_inverted_index.nucleotide | 131 |
| abstract_inverted_index.originated | 90 |
| abstract_inverted_index.palustrine | 93 |
| abstract_inverted_index.permafrost | 70 |
| abstract_inverted_index.profiling, | 54 |
| abstract_inverted_index.remarkable | 130 |
| abstract_inverted_index.similarity | 186 |
| abstract_inverted_index.suggesting | 95 |
| abstract_inverted_index.(bacterial, | 32 |
| abstract_inverted_index.København, | 183 |
| abstract_inverted_index.communities | 36, 67, 179, 200 |
| abstract_inverted_index.composition | 189 |
| abstract_inverted_index.conditions. | 98, 170 |
| abstract_inverted_index.deposition, | 81 |
| abstract_inverted_index.distinguish | 64 |
| abstract_inverted_index.methanogens | 136 |
| abstract_inverted_index.permafrost. | 142 |
| abstract_inverted_index.present-day | 138 |
| abstract_inverted_index.reconstruct | 29 |
| abstract_inverted_index.terrestrial | 83 |
| abstract_inverted_index.Importantly, | 171 |
| abstract_inverted_index.assemblages. | 72 |
| abstract_inverted_index.contemporary | 23, 194 |
| abstract_inverted_index.contributing | 122 |
| abstract_inverted_index.disruptions. | 211 |
| abstract_inverted_index.methanogenic | 105 |
| abstract_inverted_index.98%—between | 134 |
| abstract_inverted_index.Environmental | 1 |
| abstract_inverted_index.Intriguingly, | 126 |
| abstract_inverted_index.climate-driven | 209 |
| abstract_inverted_index.non-permafrost | 97 |
| abstract_inverted_index.reconstructions, | 60 |
| abstract_inverted_index.2-million-year-old | 6 |
| abstract_inverted_index.“time-traveling” | 149 |
| abstract_inverted_index.similarity—exceeding | 133 |
| cited_by_percentile_year.max | 99 |
| cited_by_percentile_year.min | 94 |
| corresponding_author_ids | https://openalex.org/A5029068173, https://openalex.org/A5028667558 |
| countries_distinct_count | 7 |
| institutions_distinct_count | 24 |
| corresponding_institution_ids | https://openalex.org/I124055696, https://openalex.org/I180437899, https://openalex.org/I241749, https://openalex.org/I2802476451, https://openalex.org/I4210127817 |
| citation_normalized_percentile.value | 0.94619921 |
| citation_normalized_percentile.is_in_top_1_percent | False |
| citation_normalized_percentile.is_in_top_10_percent | True |