Vision-dependent specification of cell types and function in the developing cortex Article Swipe

View

Sarah Cheng , Salwan Butrus , Liming Tan , Vincent Xu , Srikant Sagireddy , Joshua T. Trachtenberg , Karthik Shekhar , S Lawrence Zipursky ·

YOU? · · 2021 · Open Access · · DOI: https://doi.org/10.6084/m9.figshare.16992544.v1

Data include kernels, SNR values and proportions of functional classes for neurons in Cheng et al., "Vision-dependent specification of cell types and function in the developing cortex", Cell, 2021. For all kern and snr data, each row is a neuron, the first column represents response to the contra eye, the second column represents response to the ipsi eye. Proportions of functional classes per field of view is organized in the prop data, row 1-4 represents unresponsive, mono contra, mono ipsi and bino neurons, each column represents an imaging plane. For wt and ko, 3 planes were imaged per mouse, thus, column 1, 4, 7... represents the top plane; 2, 5, 8... represent the middle, and the rest represent the bottom.

Related Topics

Concepts

Function (biology) Visual cortex Computer science Neuroscience Psychology Biology Cell biology

Metadata

Type: dataset
Language: en
Landing Page: https://doi.org/10.6084/m9.figshare.16992544.v1
OA Status: gold
Related Works: 10
OpenAlex ID: https://openalex.org/W4394470333

All OpenAlex metadata

Raw OpenAlex JSON

OpenAlex ID: https://openalex.org/W4394470333

Canonical identifier for this work in OpenAlex
DOI: https://doi.org/10.6084/m9.figshare.16992544.v1

Digital Object Identifier
Title: Vision-dependent specification of cell types and function in the developing cortex

Work title
Type: dataset

OpenAlex work type
Language: en

Primary language
Publication year: 2021

Year of publication
Publication date: 2021-01-01

Full publication date if available
Authors: Sarah Cheng, Salwan Butrus, Liming Tan, Vincent Xu, Srikant Sagireddy, Joshua T. Trachtenberg, Karthik Shekhar, S Lawrence Zipursky

List of authors in order
Landing page: https://doi.org/10.6084/m9.figshare.16992544.v1

Publisher landing page
Open access: Yes

Whether a free full text is available
OA status: gold

Open access status per OpenAlex
OA URL: https://doi.org/10.6084/m9.figshare.16992544.v1

Direct OA link when available
Concepts: Function (biology), Visual cortex, Computer science, Neuroscience, Psychology, Biology, Cell biology

Top concepts (fields/topics) attached by OpenAlex
Cited by: 0

Total citation count in OpenAlex
Related works (count): 10

Other works algorithmically related by OpenAlex

Full payload

id	https://openalex.org/W4394470333
doi	https://doi.org/10.6084/m9.figshare.16992544.v1
ids.doi	https://doi.org/10.6084/m9.figshare.16992544.v1
ids.openalex	https://openalex.org/W4394470333
fwci
type	dataset
title	Vision-dependent specification of cell types and function in the developing cortex
biblio.issue
biblio.volume
biblio.last_page
biblio.first_page
topics[0].id	https://openalex.org/T10423
topics[0].field.id	https://openalex.org/fields/28
topics[0].field.display_name	Neuroscience
topics[0].score	0.25949999690055847
topics[0].domain.id	https://openalex.org/domains/1
topics[0].domain.display_name	Life Sciences
topics[0].subfield.id	https://openalex.org/subfields/2804
topics[0].subfield.display_name	Cellular and Molecular Neuroscience
topics[0].display_name	Neurobiology and Insect Physiology Research
is_xpac	False
apc_list
apc_paid
concepts[0].id	https://openalex.org/C14036430
concepts[0].level	2
concepts[0].score	0.6108996868133545
concepts[0].wikidata	https://www.wikidata.org/wiki/Q3736076
concepts[0].display_name	Function (biology)
concepts[1].id	https://openalex.org/C2779345533
concepts[1].level	2
concepts[1].score	0.5222509503364563
concepts[1].wikidata	https://www.wikidata.org/wiki/Q75785
concepts[1].display_name	Visual cortex
concepts[2].id	https://openalex.org/C41008148
concepts[2].level	0
concepts[2].score	0.4980025291442871
concepts[2].wikidata	https://www.wikidata.org/wiki/Q21198
concepts[2].display_name	Computer science
concepts[3].id	https://openalex.org/C169760540
concepts[3].level	1
concepts[3].score	0.4186333417892456
concepts[3].wikidata	https://www.wikidata.org/wiki/Q207011
concepts[3].display_name	Neuroscience
concepts[4].id	https://openalex.org/C15744967
concepts[4].level	0
concepts[4].score	0.2739149332046509
concepts[4].wikidata	https://www.wikidata.org/wiki/Q9418
concepts[4].display_name	Psychology
concepts[5].id	https://openalex.org/C86803240
concepts[5].level	0
concepts[5].score	0.22506529092788696
concepts[5].wikidata	https://www.wikidata.org/wiki/Q420
concepts[5].display_name	Biology
concepts[6].id	https://openalex.org/C95444343
concepts[6].level	1
concepts[6].score	0.13343438506126404
concepts[6].wikidata	https://www.wikidata.org/wiki/Q7141
concepts[6].display_name	Cell biology
keywords[0].id	https://openalex.org/keywords/function
keywords[0].score	0.6108996868133545
keywords[0].display_name	Function (biology)
keywords[1].id	https://openalex.org/keywords/visual-cortex
keywords[1].score	0.5222509503364563
keywords[1].display_name	Visual cortex
keywords[2].id	https://openalex.org/keywords/computer-science
keywords[2].score	0.4980025291442871
keywords[2].display_name	Computer science
keywords[3].id	https://openalex.org/keywords/neuroscience
keywords[3].score	0.4186333417892456
keywords[3].display_name	Neuroscience
keywords[4].id	https://openalex.org/keywords/psychology
keywords[4].score	0.2739149332046509
keywords[4].display_name	Psychology
keywords[5].id	https://openalex.org/keywords/biology
keywords[5].score	0.22506529092788696
keywords[5].display_name	Biology
keywords[6].id	https://openalex.org/keywords/cell-biology
keywords[6].score	0.13343438506126404
keywords[6].display_name	Cell biology
language	en
locations[0].id	doi:10.6084/m9.figshare.16992544.v1
locations[0].is_oa	True
locations[0].source
locations[0].license	cc-by
locations[0].pdf_url
locations[0].version
locations[0].raw_type	dataset
locations[0].license_id	https://openalex.org/licenses/cc-by
locations[0].is_accepted	False
locations[0].is_published
locations[0].raw_source_name
locations[0].landing_page_url	https://doi.org/10.6084/m9.figshare.16992544.v1
indexed_in	datacite
authorships[0].author.id	https://openalex.org/A5052709196
authorships[0].author.orcid	https://orcid.org/0000-0001-5733-4827
authorships[0].author.display_name	Sarah Cheng
authorships[0].author_position	first
authorships[0].raw_author_name	Sarah Cheng
authorships[0].is_corresponding	False
authorships[1].author.id	https://openalex.org/A5036693743
authorships[1].author.orcid	https://orcid.org/0000-0001-8679-3715
authorships[1].author.display_name	Salwan Butrus
authorships[1].author_position	middle
authorships[1].raw_author_name	Salwan Butrus
authorships[1].is_corresponding	False
authorships[2].author.id	https://openalex.org/A5086958508
authorships[2].author.orcid	https://orcid.org/0000-0002-7034-0321
authorships[2].author.display_name	Liming Tan
authorships[2].author_position	middle
authorships[2].raw_author_name	Liming Tan
authorships[2].is_corresponding	False
authorships[3].author.id	https://openalex.org/A5052588532
authorships[3].author.orcid
authorships[3].author.display_name	Vincent Xu
authorships[3].author_position	middle
authorships[3].raw_author_name	Vincent Xu
authorships[3].is_corresponding	False
authorships[4].author.id	https://openalex.org/A5069085343
authorships[4].author.orcid	https://orcid.org/0000-0002-0057-961X
authorships[4].author.display_name	Srikant Sagireddy
authorships[4].author_position	middle
authorships[4].raw_author_name	Srikant Sagireddy
authorships[4].is_corresponding	False
authorships[5].author.id	https://openalex.org/A5027807679
authorships[5].author.orcid	https://orcid.org/0000-0002-5041-774X
authorships[5].author.display_name	Joshua T. Trachtenberg
authorships[5].author_position	middle
authorships[5].raw_author_name	Joshua T. Trachtenberg
authorships[5].is_corresponding	False
authorships[6].author.id	https://openalex.org/A5051555132
authorships[6].author.orcid	https://orcid.org/0000-0003-4349-6600
authorships[6].author.display_name	Karthik Shekhar
authorships[6].author_position	middle
authorships[6].raw_author_name	Karthik Shekhar
authorships[6].is_corresponding	False
authorships[7].author.id	https://openalex.org/A5044761400
authorships[7].author.orcid	https://orcid.org/0000-0001-5630-7181
authorships[7].author.display_name	S Lawrence Zipursky
authorships[7].author_position	last
authorships[7].raw_author_name	S. Lawrence Zipursky
authorships[7].is_corresponding	False
has_content.pdf	False
has_content.grobid_xml	False
is_paratext	False
open_access.is_oa	True
open_access.oa_url	https://doi.org/10.6084/m9.figshare.16992544.v1
open_access.oa_status	gold
open_access.any_repository_has_fulltext	False
created_date	2025-10-10T00:00:00
display_name	Vision-dependent specification of cell types and function in the developing cortex
has_fulltext	False
is_retracted	False
updated_date	2025-11-06T06:51:31.235846
primary_topic.id	https://openalex.org/T10423
primary_topic.field.id	https://openalex.org/fields/28
primary_topic.field.display_name	Neuroscience
primary_topic.score	0.25949999690055847
primary_topic.domain.id	https://openalex.org/domains/1
primary_topic.domain.display_name	Life Sciences
primary_topic.subfield.id	https://openalex.org/subfields/2804
primary_topic.subfield.display_name	Cellular and Molecular Neuroscience
primary_topic.display_name	Neurobiology and Insect Physiology Research
related_works	https://openalex.org/W4391375266, https://openalex.org/W2748952813, https://openalex.org/W2390279801, https://openalex.org/W2358668433, https://openalex.org/W2376932109, https://openalex.org/W2001405890, https://openalex.org/W2382290278, https://openalex.org/W2478288626, https://openalex.org/W4391913857, https://openalex.org/W2350741829
cited_by_count	0
locations_count	1
best_oa_location.id	doi:10.6084/m9.figshare.16992544.v1
best_oa_location.is_oa	True
best_oa_location.source
best_oa_location.license	cc-by
best_oa_location.pdf_url
best_oa_location.version
best_oa_location.raw_type	dataset
best_oa_location.license_id	https://openalex.org/licenses/cc-by
best_oa_location.is_accepted	False
best_oa_location.is_published	False
best_oa_location.raw_source_name
best_oa_location.landing_page_url	https://doi.org/10.6084/m9.figshare.16992544.v1
primary_location.id	doi:10.6084/m9.figshare.16992544.v1
primary_location.is_oa	True
primary_location.source
primary_location.license	cc-by
primary_location.pdf_url
primary_location.version
primary_location.raw_type	dataset
primary_location.license_id	https://openalex.org/licenses/cc-by
primary_location.is_accepted	False
primary_location.is_published	False
primary_location.raw_source_name
primary_location.landing_page_url	https://doi.org/10.6084/m9.figshare.16992544.v1
publication_date	2021-01-01
publication_year	2021
referenced_works_count	0
abstract_inverted_index.3	93
abstract_inverted_index.a	38
abstract_inverted_index.1,	101
abstract_inverted_index.2,	108
abstract_inverted_index.4,	102
abstract_inverted_index.5,	109
abstract_inverted_index.an	86
abstract_inverted_index.et	14
abstract_inverted_index.in	12, 23, 68
abstract_inverted_index.is	37, 66
abstract_inverted_index.of	7, 18, 59, 64
abstract_inverted_index.to	45, 54
abstract_inverted_index.wt	90
abstract_inverted_index.1-4	73
abstract_inverted_index.For	29, 89
abstract_inverted_index.SNR	3
abstract_inverted_index.all	30
abstract_inverted_index.and	5, 21, 32, 80, 91, 114
abstract_inverted_index.for	10
abstract_inverted_index.ko,	92
abstract_inverted_index.per	62, 97
abstract_inverted_index.row	36, 72
abstract_inverted_index.snr	33
abstract_inverted_index.the	24, 40, 46, 49, 55, 69, 105, 112, 115, 118
abstract_inverted_index.top	106
abstract_inverted_index.7...	103
abstract_inverted_index.8...	110
abstract_inverted_index.Data	0
abstract_inverted_index.al.,	15
abstract_inverted_index.bino	81
abstract_inverted_index.cell	19
abstract_inverted_index.each	35, 83
abstract_inverted_index.eye,	48
abstract_inverted_index.eye.	57
abstract_inverted_index.ipsi	56, 79
abstract_inverted_index.kern	31
abstract_inverted_index.mono	76, 78
abstract_inverted_index.prop	70
abstract_inverted_index.rest	116
abstract_inverted_index.view	65
abstract_inverted_index.were	95
abstract_inverted_index.2021.	28
abstract_inverted_index.Cell,	27
abstract_inverted_index.Cheng	13
abstract_inverted_index.data,	34, 71
abstract_inverted_index.field	63
abstract_inverted_index.first	41
abstract_inverted_index.thus,	99
abstract_inverted_index.types	20
abstract_inverted_index.column	42, 51, 84, 100
abstract_inverted_index.contra	47
abstract_inverted_index.imaged	96
abstract_inverted_index.mouse,	98
abstract_inverted_index.plane.	88
abstract_inverted_index.plane;	107
abstract_inverted_index.planes	94
abstract_inverted_index.second	50
abstract_inverted_index.values	4
abstract_inverted_index.bottom.	119
abstract_inverted_index.classes	9, 61
abstract_inverted_index.contra,	77
abstract_inverted_index.imaging	87
abstract_inverted_index.include	1
abstract_inverted_index.middle,	113
abstract_inverted_index.neuron,	39
abstract_inverted_index.neurons	11
abstract_inverted_index.cortex",	26
abstract_inverted_index.function	22
abstract_inverted_index.kernels,	2
abstract_inverted_index.neurons,	82
abstract_inverted_index.response	44, 53
abstract_inverted_index.organized	67
abstract_inverted_index.represent	111, 117
abstract_inverted_index.developing	25
abstract_inverted_index.functional	8, 60
abstract_inverted_index.represents	43, 52, 74, 85, 104
abstract_inverted_index.Proportions	58
abstract_inverted_index.proportions	6
abstract_inverted_index.specification	17
abstract_inverted_index.unresponsive,	75
abstract_inverted_index."Vision-dependent	16
cited_by_percentile_year
countries_distinct_count	0
institutions_distinct_count	8
citation_normalized_percentile