Whole-Genome Sequence of Pseudomonas sp. Strain MM211, Isolated from Soil in Langenfeld, Germany Article Swipe

View

Donat Wulf , Jonas Arndt , Isabell E. Bleile , Charlotte Bramers , Pia L. Gülpen , Bart Verwaaijen ·

YOU? · · 2022 · Open Access · · DOI: https://doi.org/10.1128/mra.01048-21

Here, we present the genome sequence of Pseudomonas sp. strain MM211, which was isolated from garden soil. The complete circular genome consists of a 5,281,862-bp chromosome, with a GC content of 61.5%.

Related Topics

Whole Genome Sequencing

Grey's Anatomy Season 18

Concepts

Whole genome sequencing Genome Strain (injury) Circular bacterial chromosome Pseudomonas GC-content Chromosome Biology Genetics Sequence (biology) Gene Bacteria Anatomy

Metadata

Type: article
Language: en
Landing Page: https://doi.org/10.1128/mra.01048-21
OA Status: diamond
References: 24
Related Works: 10
OpenAlex ID: https://openalex.org/W4210320843

All OpenAlex metadata

Raw OpenAlex JSON

OpenAlex ID: https://openalex.org/W4210320843

Canonical identifier for this work in OpenAlex
DOI: https://doi.org/10.1128/mra.01048-21

Digital Object Identifier
Title: Whole-Genome Sequence of Pseudomonas sp. Strain MM211, Isolated from Soil in Langenfeld, Germany

Work title
Type: article

OpenAlex work type
Language: en

Primary language
Publication year: 2022

Year of publication
Publication date: 2022-02-03

Full publication date if available
Authors: Donat Wulf, Jonas Arndt, Isabell E. Bleile, Charlotte Bramers, Pia L. Gülpen, Bart Verwaaijen

List of authors in order
Landing page: https://doi.org/10.1128/mra.01048-21

Publisher landing page
Open access: Yes

Whether a free full text is available
OA status: diamond

Open access status per OpenAlex
OA URL: https://doi.org/10.1128/mra.01048-21

Direct OA link when available
Concepts: Whole genome sequencing, Genome, Strain (injury), Circular bacterial chromosome, Pseudomonas, GC-content, Chromosome, Biology, Genetics, Sequence (biology), Gene, Bacteria, Anatomy

Top concepts (fields/topics) attached by OpenAlex
Cited by: 0

Total citation count in OpenAlex
References (count): 24

Number of works referenced by this work
Related works (count): 10

Other works algorithmically related by OpenAlex

Full payload

id	https://openalex.org/W4210320843
doi	https://doi.org/10.1128/mra.01048-21
ids.doi	https://doi.org/10.1128/mra.01048-21
ids.pmid	https://pubmed.ncbi.nlm.nih.gov/35112898
ids.openalex	https://openalex.org/W4210320843
fwci	0.0
type	article
title	Whole-Genome Sequence of Pseudomonas sp. Strain MM211, Isolated from Soil in Langenfeld, Germany
biblio.issue	2
biblio.volume	11
biblio.last_page	e0104821
biblio.first_page	e0104821
topics[0].id	https://openalex.org/T10015
topics[0].field.id	https://openalex.org/fields/13
topics[0].field.display_name	Biochemistry, Genetics and Molecular Biology
topics[0].score	0.9998999834060669
topics[0].domain.id	https://openalex.org/domains/1
topics[0].domain.display_name	Life Sciences
topics[0].subfield.id	https://openalex.org/subfields/1312
topics[0].subfield.display_name	Molecular Biology
topics[0].display_name	Genomics and Phylogenetic Studies
topics[1].id	https://openalex.org/T11048
topics[1].field.id	https://openalex.org/fields/23
topics[1].field.display_name	Environmental Science
topics[1].score	0.9965000152587891
topics[1].domain.id	https://openalex.org/domains/3
topics[1].domain.display_name	Physical Sciences
topics[1].subfield.id	https://openalex.org/subfields/2303
topics[1].subfield.display_name	Ecology
topics[1].display_name	Bacteriophages and microbial interactions
topics[2].id	https://openalex.org/T10076
topics[2].field.id	https://openalex.org/fields/11
topics[2].field.display_name	Agricultural and Biological Sciences
topics[2].score	0.996399998664856
topics[2].domain.id	https://openalex.org/domains/1
topics[2].domain.display_name	Life Sciences
topics[2].subfield.id	https://openalex.org/subfields/1110
topics[2].subfield.display_name	Plant Science
topics[2].display_name	Plant-Microbe Interactions and Immunity
is_xpac	False
apc_list
apc_paid
concepts[0].id	https://openalex.org/C24432333
concepts[0].level	4
concepts[0].score	0.8256065845489502
concepts[0].wikidata	https://www.wikidata.org/wiki/Q2068526
concepts[0].display_name	Whole genome sequencing
concepts[1].id	https://openalex.org/C141231307
concepts[1].level	3
concepts[1].score	0.7671326994895935
concepts[1].wikidata	https://www.wikidata.org/wiki/Q7020
concepts[1].display_name	Genome
concepts[2].id	https://openalex.org/C2778022156
concepts[2].level	2
concepts[2].score	0.7626317739486694
concepts[2].wikidata	https://www.wikidata.org/wiki/Q576145
concepts[2].display_name	Strain (injury)
concepts[3].id	https://openalex.org/C58167604
concepts[3].level	4
concepts[3].score	0.7113758325576782
concepts[3].wikidata	https://www.wikidata.org/wiki/Q5121654
concepts[3].display_name	Circular bacterial chromosome
concepts[4].id	https://openalex.org/C2781463711
concepts[4].level	3
concepts[4].score	0.6036507487297058
concepts[4].wikidata	https://www.wikidata.org/wiki/Q131143
concepts[4].display_name	Pseudomonas
concepts[5].id	https://openalex.org/C42251679
concepts[5].level	4
concepts[5].score	0.5931391716003418
concepts[5].wikidata	https://www.wikidata.org/wiki/Q933491
concepts[5].display_name	GC-content
concepts[6].id	https://openalex.org/C30481170
concepts[6].level	3
concepts[6].score	0.5596416592597961
concepts[6].wikidata	https://www.wikidata.org/wiki/Q37748
concepts[6].display_name	Chromosome
concepts[7].id	https://openalex.org/C86803240
concepts[7].level	0
concepts[7].score	0.5569879412651062
concepts[7].wikidata	https://www.wikidata.org/wiki/Q420
concepts[7].display_name	Biology
concepts[8].id	https://openalex.org/C54355233
concepts[8].level	1
concepts[8].score	0.4793042242527008
concepts[8].wikidata	https://www.wikidata.org/wiki/Q7162
concepts[8].display_name	Genetics
concepts[9].id	https://openalex.org/C2778112365
concepts[9].level	2
concepts[9].score	0.478891521692276
concepts[9].wikidata	https://www.wikidata.org/wiki/Q3511065
concepts[9].display_name	Sequence (biology)
concepts[10].id	https://openalex.org/C104317684
concepts[10].level	2
concepts[10].score	0.36857348680496216
concepts[10].wikidata	https://www.wikidata.org/wiki/Q7187
concepts[10].display_name	Gene
concepts[11].id	https://openalex.org/C523546767
concepts[11].level	2
concepts[11].score	0.1519162952899933
concepts[11].wikidata	https://www.wikidata.org/wiki/Q10876
concepts[11].display_name	Bacteria
concepts[12].id	https://openalex.org/C105702510
concepts[12].level	1
concepts[12].score	0.054692476987838745
concepts[12].wikidata	https://www.wikidata.org/wiki/Q514
concepts[12].display_name	Anatomy
keywords[0].id	https://openalex.org/keywords/whole-genome-sequencing
keywords[0].score	0.8256065845489502
keywords[0].display_name	Whole genome sequencing
keywords[1].id	https://openalex.org/keywords/genome
keywords[1].score	0.7671326994895935
keywords[1].display_name	Genome
keywords[2].id	https://openalex.org/keywords/strain
keywords[2].score	0.7626317739486694
keywords[2].display_name	Strain (injury)
keywords[3].id	https://openalex.org/keywords/circular-bacterial-chromosome
keywords[3].score	0.7113758325576782
keywords[3].display_name	Circular bacterial chromosome
keywords[4].id	https://openalex.org/keywords/pseudomonas
keywords[4].score	0.6036507487297058
keywords[4].display_name	Pseudomonas
keywords[5].id	https://openalex.org/keywords/gc-content
keywords[5].score	0.5931391716003418
keywords[5].display_name	GC-content
keywords[6].id	https://openalex.org/keywords/chromosome
keywords[6].score	0.5596416592597961
keywords[6].display_name	Chromosome
keywords[7].id	https://openalex.org/keywords/biology
keywords[7].score	0.5569879412651062
keywords[7].display_name	Biology
keywords[8].id	https://openalex.org/keywords/genetics
keywords[8].score	0.4793042242527008
keywords[8].display_name	Genetics
keywords[9].id	https://openalex.org/keywords/sequence
keywords[9].score	0.478891521692276
keywords[9].display_name	Sequence (biology)
keywords[10].id	https://openalex.org/keywords/gene
keywords[10].score	0.36857348680496216
keywords[10].display_name	Gene
keywords[11].id	https://openalex.org/keywords/bacteria
keywords[11].score	0.1519162952899933
keywords[11].display_name	Bacteria
keywords[12].id	https://openalex.org/keywords/anatomy
keywords[12].score	0.054692476987838745
keywords[12].display_name	Anatomy
language	en
locations[0].id	doi:10.1128/mra.01048-21
locations[0].is_oa	True
locations[0].source.id	https://openalex.org/S4210232526
locations[0].source.issn	2576-098X
locations[0].source.type	journal
locations[0].source.is_oa	True
locations[0].source.issn_l	2576-098X
locations[0].source.is_core	True
locations[0].source.is_in_doaj	False
locations[0].source.display_name	Microbiology Resource Announcements
locations[0].source.host_organization	https://openalex.org/P4310320263
locations[0].source.host_organization_name	American Society for Microbiology
locations[0].source.host_organization_lineage	https://openalex.org/P4310320263
locations[0].license	cc-by
locations[0].pdf_url
locations[0].version	publishedVersion
locations[0].raw_type	journal-article
locations[0].license_id	https://openalex.org/licenses/cc-by
locations[0].is_accepted	True
locations[0].is_published	True
locations[0].raw_source_name	Microbiology Resource Announcements
locations[0].landing_page_url	https://doi.org/10.1128/mra.01048-21
locations[1].id	pmid:35112898
locations[1].is_oa	False
locations[1].source.id	https://openalex.org/S4306525036
locations[1].source.issn
locations[1].source.type	repository
locations[1].source.is_oa	False
locations[1].source.issn_l
locations[1].source.is_core	False
locations[1].source.is_in_doaj	False
locations[1].source.display_name	PubMed
locations[1].source.host_organization	https://openalex.org/I1299303238
locations[1].source.host_organization_name	National Institutes of Health
locations[1].source.host_organization_lineage	https://openalex.org/I1299303238
locations[1].license
locations[1].pdf_url
locations[1].version	publishedVersion
locations[1].raw_type
locations[1].license_id
locations[1].is_accepted	True
locations[1].is_published	True
locations[1].raw_source_name	Microbiology resource announcements
locations[1].landing_page_url	https://pubmed.ncbi.nlm.nih.gov/35112898
locations[2].id	pmh:oai:pubmedcentral.nih.gov:8812321
locations[2].is_oa	True
locations[2].source.id	https://openalex.org/S2764455111
locations[2].source.issn
locations[2].source.type	repository
locations[2].source.is_oa	False
locations[2].source.issn_l
locations[2].source.is_core	False
locations[2].source.is_in_doaj	False
locations[2].source.display_name	PubMed Central
locations[2].source.host_organization	https://openalex.org/I1299303238
locations[2].source.host_organization_name	National Institutes of Health
locations[2].source.host_organization_lineage	https://openalex.org/I1299303238
locations[2].license	other-oa
locations[2].pdf_url
locations[2].version	submittedVersion
locations[2].raw_type	Text
locations[2].license_id	https://openalex.org/licenses/other-oa
locations[2].is_accepted	False
locations[2].is_published	False
locations[2].raw_source_name	Microbiol Resour Announc
locations[2].landing_page_url	https://www.ncbi.nlm.nih.gov/pmc/articles/8812321
indexed_in	crossref, pubmed
authorships[0].author.id	https://openalex.org/A5091820744
authorships[0].author.orcid	https://orcid.org/0000-0002-3032-1628
authorships[0].author.display_name	Donat Wulf
authorships[0].countries	DE
authorships[0].affiliations[0].institution_ids	https://openalex.org/I20121455
authorships[0].affiliations[0].raw_affiliation_string	Computational Biology, Faculty of Biology, Bielefeld University, Bielefeld, Germany
authorships[0].affiliations[1].institution_ids	https://openalex.org/I20121455
authorships[0].affiliations[1].raw_affiliation_string	Graduate School DILS, Bielefeld Institute for Bioinformatics Infrastructure, Bielefeld University, Bielefeld, Germany
authorships[0].institutions[0].id	https://openalex.org/I20121455
authorships[0].institutions[0].ror	https://ror.org/02hpadn98
authorships[0].institutions[0].type	education
authorships[0].institutions[0].lineage	https://openalex.org/I20121455
authorships[0].institutions[0].country_code	DE
authorships[0].institutions[0].display_name	Bielefeld University
authorships[0].author_position	first
authorships[0].raw_author_name	Donat Wulf
authorships[0].is_corresponding	False
authorships[0].raw_affiliation_strings	Computational Biology, Faculty of Biology, Bielefeld University, Bielefeld, Germany, Graduate School DILS, Bielefeld Institute for Bioinformatics Infrastructure, Bielefeld University, Bielefeld, Germany
authorships[1].author.id	https://openalex.org/A5032286694
authorships[1].author.orcid
authorships[1].author.display_name	Jonas Arndt
authorships[1].countries	DE
authorships[1].affiliations[0].institution_ids	https://openalex.org/I20121455
authorships[1].affiliations[0].raw_affiliation_string	Molecular Biotechnology, Bielefeld University, Bielefeld, Germany
authorships[1].institutions[0].id	https://openalex.org/I20121455
authorships[1].institutions[0].ror	https://ror.org/02hpadn98
authorships[1].institutions[0].type	education
authorships[1].institutions[0].lineage	https://openalex.org/I20121455
authorships[1].institutions[0].country_code	DE
authorships[1].institutions[0].display_name	Bielefeld University
authorships[1].author_position	middle
authorships[1].raw_author_name	Jonas Arndt
authorships[1].is_corresponding	False
authorships[1].raw_affiliation_strings	Molecular Biotechnology, Bielefeld University, Bielefeld, Germany
authorships[2].author.id	https://openalex.org/A5041515836
authorships[2].author.orcid	https://orcid.org/0000-0002-4985-044X
authorships[2].author.display_name	Isabell E. Bleile
authorships[2].countries	DE
authorships[2].affiliations[0].institution_ids	https://openalex.org/I20121455
authorships[2].affiliations[0].raw_affiliation_string	Molecular Biotechnology, Bielefeld University, Bielefeld, Germany
authorships[2].institutions[0].id	https://openalex.org/I20121455
authorships[2].institutions[0].ror	https://ror.org/02hpadn98
authorships[2].institutions[0].type	education
authorships[2].institutions[0].lineage	https://openalex.org/I20121455
authorships[2].institutions[0].country_code	DE
authorships[2].institutions[0].display_name	Bielefeld University
authorships[2].author_position	middle
authorships[2].raw_author_name	Isabell E. Bleile
authorships[2].is_corresponding	False
authorships[2].raw_affiliation_strings	Molecular Biotechnology, Bielefeld University, Bielefeld, Germany
authorships[3].author.id	https://openalex.org/A5083582893
authorships[3].author.orcid
authorships[3].author.display_name	Charlotte Bramers
authorships[3].countries	DE
authorships[3].affiliations[0].institution_ids	https://openalex.org/I20121455
authorships[3].affiliations[0].raw_affiliation_string	Biology, Bielefeld University, Bielefeld, Germany
authorships[3].institutions[0].id	https://openalex.org/I20121455
authorships[3].institutions[0].ror	https://ror.org/02hpadn98
authorships[3].institutions[0].type	education
authorships[3].institutions[0].lineage	https://openalex.org/I20121455
authorships[3].institutions[0].country_code	DE
authorships[3].institutions[0].display_name	Bielefeld University
authorships[3].author_position	middle
authorships[3].raw_author_name	Charlotte Bramers
authorships[3].is_corresponding	False
authorships[3].raw_affiliation_strings	Biology, Bielefeld University, Bielefeld, Germany
authorships[4].author.id	https://openalex.org/A5066073461
authorships[4].author.orcid
authorships[4].author.display_name	Pia L. Gülpen
authorships[4].countries	DE
authorships[4].affiliations[0].institution_ids	https://openalex.org/I20121455
authorships[4].affiliations[0].raw_affiliation_string	Molecular Biology, Bielefeld University, Bielefeld, Germany
authorships[4].institutions[0].id	https://openalex.org/I20121455
authorships[4].institutions[0].ror	https://ror.org/02hpadn98
authorships[4].institutions[0].type	education
authorships[4].institutions[0].lineage	https://openalex.org/I20121455
authorships[4].institutions[0].country_code	DE
authorships[4].institutions[0].display_name	Bielefeld University
authorships[4].author_position	middle
authorships[4].raw_author_name	Pia L. Gülpen
authorships[4].is_corresponding	False
authorships[4].raw_affiliation_strings	Molecular Biology, Bielefeld University, Bielefeld, Germany
authorships[5].author.id	https://openalex.org/A5027364412
authorships[5].author.orcid	https://orcid.org/0000-0002-6215-844X
authorships[5].author.display_name	Bart Verwaaijen
authorships[5].countries	DE
authorships[5].affiliations[0].institution_ids	https://openalex.org/I20121455
authorships[5].affiliations[0].raw_affiliation_string	Computational Biology, Faculty of Biology, Bielefeld University, Bielefeld, Germany
authorships[5].institutions[0].id	https://openalex.org/I20121455
authorships[5].institutions[0].ror	https://ror.org/02hpadn98
authorships[5].institutions[0].type	education
authorships[5].institutions[0].lineage	https://openalex.org/I20121455
authorships[5].institutions[0].country_code	DE
authorships[5].institutions[0].display_name	Bielefeld University
authorships[5].author_position	last
authorships[5].raw_author_name	Bart Verwaaijen
authorships[5].is_corresponding	True
authorships[5].raw_affiliation_strings	Computational Biology, Faculty of Biology, Bielefeld University, Bielefeld, Germany
has_content.pdf	False
has_content.grobid_xml	False
is_paratext	False
open_access.is_oa	True
open_access.oa_url	https://doi.org/10.1128/mra.01048-21
open_access.oa_status	diamond
open_access.any_repository_has_fulltext	False
created_date	2025-10-10T00:00:00
display_name	Whole-Genome Sequence of Pseudomonas sp. Strain MM211, Isolated from Soil in Langenfeld, Germany
has_fulltext	False
is_retracted	False
updated_date	2025-11-06T03:46:38.306776
primary_topic.id	https://openalex.org/T10015
primary_topic.field.id	https://openalex.org/fields/13
primary_topic.field.display_name	Biochemistry, Genetics and Molecular Biology
primary_topic.score	0.9998999834060669
primary_topic.domain.id	https://openalex.org/domains/1
primary_topic.domain.display_name	Life Sciences
primary_topic.subfield.id	https://openalex.org/subfields/1312
primary_topic.subfield.display_name	Molecular Biology
primary_topic.display_name	Genomics and Phylogenetic Studies
related_works	https://openalex.org/W1499878816, https://openalex.org/W1952562766, https://openalex.org/W2613469409, https://openalex.org/W4210320843, https://openalex.org/W4387692869, https://openalex.org/W4292202417, https://openalex.org/W2494255009, https://openalex.org/W3017312365, https://openalex.org/W2013689536, https://openalex.org/W4296710215
cited_by_count	0
locations_count	3
best_oa_location.id	doi:10.1128/mra.01048-21
best_oa_location.is_oa	True
best_oa_location.source.id	https://openalex.org/S4210232526
best_oa_location.source.issn	2576-098X
best_oa_location.source.type	journal
best_oa_location.source.is_oa	True
best_oa_location.source.issn_l	2576-098X
best_oa_location.source.is_core	True
best_oa_location.source.is_in_doaj	False
best_oa_location.source.display_name	Microbiology Resource Announcements
best_oa_location.source.host_organization	https://openalex.org/P4310320263
best_oa_location.source.host_organization_name	American Society for Microbiology
best_oa_location.source.host_organization_lineage	https://openalex.org/P4310320263
best_oa_location.license	cc-by
best_oa_location.pdf_url
best_oa_location.version	publishedVersion
best_oa_location.raw_type	journal-article
best_oa_location.license_id	https://openalex.org/licenses/cc-by
best_oa_location.is_accepted	True
best_oa_location.is_published	True
best_oa_location.raw_source_name	Microbiology Resource Announcements
best_oa_location.landing_page_url	https://doi.org/10.1128/mra.01048-21
primary_location.id	doi:10.1128/mra.01048-21
primary_location.is_oa	True
primary_location.source.id	https://openalex.org/S4210232526
primary_location.source.issn	2576-098X
primary_location.source.type	journal
primary_location.source.is_oa	True
primary_location.source.issn_l	2576-098X
primary_location.source.is_core	True
primary_location.source.is_in_doaj	False
primary_location.source.display_name	Microbiology Resource Announcements
primary_location.source.host_organization	https://openalex.org/P4310320263
primary_location.source.host_organization_name	American Society for Microbiology
primary_location.source.host_organization_lineage	https://openalex.org/P4310320263
primary_location.license	cc-by
primary_location.pdf_url
primary_location.version	publishedVersion
primary_location.raw_type	journal-article
primary_location.license_id	https://openalex.org/licenses/cc-by
primary_location.is_accepted	True
primary_location.is_published	True
primary_location.raw_source_name	Microbiology Resource Announcements
primary_location.landing_page_url	https://doi.org/10.1128/mra.01048-21
publication_date	2022-02-03
publication_year	2022
referenced_works	https://openalex.org/W2762188151, https://openalex.org/W2026628842, https://openalex.org/W2013925246, https://openalex.org/W3003341178, https://openalex.org/W2884080534, https://openalex.org/W2061525000, https://openalex.org/W2697386047, https://openalex.org/W3117088501, https://openalex.org/W2165459409, https://openalex.org/W2950891420, https://openalex.org/W2950354111, https://openalex.org/W2575750030, https://openalex.org/W3186309583, https://openalex.org/W2126653364, https://openalex.org/W2089404152, https://openalex.org/W2116206245, https://openalex.org/W3161596995, https://openalex.org/W1985010604, https://openalex.org/W2133579817, https://openalex.org/W2946204549, https://openalex.org/W2161973008, https://openalex.org/W2088481129, https://openalex.org/W2108234281, https://openalex.org/W3109735703
referenced_works_count	24
abstract_inverted_index.a	23, 27
abstract_inverted_index.GC	28
abstract_inverted_index.of	6, 22, 30
abstract_inverted_index.we	1
abstract_inverted_index.The	17
abstract_inverted_index.sp.	8
abstract_inverted_index.the	3
abstract_inverted_index.was	12
abstract_inverted_index.from	14
abstract_inverted_index.with	26
abstract_inverted_index.Here,	0
abstract_inverted_index.soil.	16
abstract_inverted_index.which	11
abstract_inverted_index.61.5%.	31
abstract_inverted_index.MM211,	10
abstract_inverted_index.garden	15
abstract_inverted_index.genome	4, 20
abstract_inverted_index.strain	9
abstract_inverted_index.content	29
abstract_inverted_index.present	2
abstract_inverted_index.circular	19
abstract_inverted_index.complete	18
abstract_inverted_index.consists	21
abstract_inverted_index.isolated	13
abstract_inverted_index.sequence	5
abstract_inverted_index.Pseudomonas	7
abstract_inverted_index.chromosome,	25
abstract_inverted_index.5,281,862-bp	24
cited_by_percentile_year
corresponding_author_ids	https://openalex.org/A5027364412
countries_distinct_count	1
institutions_distinct_count	6
corresponding_institution_ids	https://openalex.org/I20121455
sustainable_development_goals[0].id	https://metadata.un.org/sdg/15
sustainable_development_goals[0].score	0.7099999785423279
sustainable_development_goals[0].display_name	Life in Land
citation_normalized_percentile.value	0.00814559
citation_normalized_percentile.is_in_top_1_percent	False
citation_normalized_percentile.is_in_top_10_percent	False