Arindam Banerjee
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View article: Geospatial Machine Learning Libraries
Geospatial Machine Learning Libraries Open
Recent advances in machine learning have been supported by the emergence of domain-specific software libraries, enabling streamlined workflows and increased reproducibility. For geospatial machine learning (GeoML), the availability of Eart…
View article: TorchGeo: Deep Learning With Geospatial Data
TorchGeo: Deep Learning With Geospatial Data Open
Remotely sensed geospatial data are critical for applications including precision agriculture, urban planning, disaster monitoring and response, and climate change research, among others. Deep learning methods are particularly promising fo…
View article: Sketched Adaptive Federated Deep Learning: A Sharp Convergence Analysis
Sketched Adaptive Federated Deep Learning: A Sharp Convergence Analysis Open
Combining gradient compression methods (e.g., CountSketch, quantization) and adaptive optimizers (e.g., Adam, AMSGrad) is a desirable goal in federated learning (FL), with potential benefits on both fewer communication rounds and less per-…
View article: Mitochondrial metabolism is a key determinant of chemotherapy sensitivity in Colorectal Cancer
Mitochondrial metabolism is a key determinant of chemotherapy sensitivity in Colorectal Cancer Open
Therapy resistance is attributed to over 80% of cancer deaths per year emphasizing the urgent need to overcome this challenge for improved patient outcomes. Despite its widespread use in colorectal cancer (CRC) treatment, resistance to 5-f…
View article: Supplementary Tables 1-8 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Supplementary Tables 1-8 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
PDF file - 226K, TABLE S1: List of miRNAs on human chromosome 3p and the changes of their genome copies determined by genomic real-time PCR; TABLE S2: Clinical significance of the expression of miR-128 in breast cancer patients; TABLE S3: …
View article: Supplementary Figures 1-6 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Supplementary Figures 1-6 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
PDF file - 1291K, FIGURE S1: Representative data of genomic real-time PCR screening for DNA copy numbers of aberrant microRNAs on human chromosome 3p in breast carcinoma and the correlation between expression levels of miR-128 and ARPP21; …
View article: Supplementary Figures 1-6 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Supplementary Figures 1-6 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
PDF file - 1291K, FIGURE S1: Representative data of genomic real-time PCR screening for DNA copy numbers of aberrant microRNAs on human chromosome 3p in breast carcinoma and the correlation between expression levels of miR-128 and ARPP21; …
View article: Supplementary Tables 1-8 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Supplementary Tables 1-8 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
PDF file - 226K, TABLE S1: List of miRNAs on human chromosome 3p and the changes of their genome copies determined by genomic real-time PCR; TABLE S2: Clinical significance of the expression of miR-128 in breast cancer patients; TABLE S3: …
View article: Supplementary Figure Legends 1-6 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Supplementary Figure Legends 1-6 from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
PDF file - 205K
View article: Supplementary Materials and Methods from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Supplementary Materials and Methods from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
PDF file - 190K, Includes patient and specimen data, reagent information, miRNA and siRNA transfection, and statistical analysis. Also includes supplementary references
View article: Data from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Data from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
A discontinuous pattern of LOH at chromosome 3p has been reported in 87% of primary breast cancers. Despite the identification of several tumor suppressor genes in this region, there has yet to be a detailed analysis of noncoding RNAs incl…
View article: Data from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells
Data from Loss of SNAIL Regulated miR-128-2 on Chromosome 3p22.3 Targets Multiple Stem Cell Factors to Promote Transformation of Mammary Epithelial Cells Open
A discontinuous pattern of LOH at chromosome 3p has been reported in 87% of primary breast cancers. Despite the identification of several tumor suppressor genes in this region, there has yet to be a detailed analysis of noncoding RNAs incl…
View article: Promises and challenges for targeting the immunological players in the tumor micro-environment – Critical determinants for NP-based therapy
Promises and challenges for targeting the immunological players in the tumor micro-environment – Critical determinants for NP-based therapy Open
Immunotherapy holds great promises to address an effective and durable therapeutic response in a wider range of cancer types. However, the understanding of the complex immune biology interactions within the Tumour Immune Microenvironment (…
View article: Organic Mixed Ion-Electron Conductivity in Polymer Hybrid Systems
Organic Mixed Ion-Electron Conductivity in Polymer Hybrid Systems Open
Recently, organic materials with mixed ion/electron conductivity (OMIEC) have gained significant interest among research communities all over the world. The unique ability to conduct ions and electrons in the same organic material adds to …
View article: TorchGeo: Deep Learning With Geospatial Data
TorchGeo: Deep Learning With Geospatial Data Open
Remotely sensed geospatial data are critical for applications including precision agriculture, urban planning, disaster monitoring and response, and climate change research, among others. Deep learning methods are particularly promising fo…
View article: 874 Development of BCA101, a bifunctional antibody capable of simultaneously disabling EGFR and TGFβ signaling, as novel single-agent immunotherapy
874 Development of BCA101, a bifunctional antibody capable of simultaneously disabling EGFR and TGFβ signaling, as novel single-agent immunotherapy Open
Background Given the pleiotropic functions of transforming growth factor-beta (TGFβ), current approaches to targeting systemic TGFβ will likely lead to suboptimal clinical activity and/or undesirable effects. Epidermal growth factor recept…
View article: Stimuli responsive multicolour fluorescence emission in carbon nanodots and application in metal free hydrogen evolution from water
Stimuli responsive multicolour fluorescence emission in carbon nanodots and application in metal free hydrogen evolution from water Open
Visible light sensitive stimuli responsive fluorescent carbon dots have been fabricated and utilized for metal free hydrogen evolution from water.
View article: Peptide-Based Gel in Environmental Remediation: Removal of Toxic Organic Dyes and Hazardous Pb<sup>2+</sup> and Cd<sup>2+</sup> Ions from Wastewater and Oil Spill Recovery
Peptide-Based Gel in Environmental Remediation: Removal of Toxic Organic Dyes and Hazardous Pb<sup>2+</sup> and Cd<sup>2+</sup> Ions from Wastewater and Oil Spill Recovery Open
A dipeptide-based synthetic amphiphile bearing a myristyl chain has been found to form hydrogels in the pH range 6.9-8.5 and organogels in various organic solvents including petroleum ether, diesel, kerosene, and petrol. These organogels a…
View article: Luminescent Naphthalene Diimide-Based Peptide in Aqueous Medium and in Solid State: Rewritable Fluorescent Color Code
Luminescent Naphthalene Diimide-Based Peptide in Aqueous Medium and in Solid State: Rewritable Fluorescent Color Code Open
This study convincingly demonstrates a unique example of the self-assembly of a naphthalene diimide (NDI)-appended peptide into a fluorescent J-aggregate in aqueous media. Moreover, this aggregated species shows a remarkable yellow fluores…
View article: Peptide-based ambidextrous bifunctional gelator: applications in oil spill recovery and removal of toxic organic dyes for waste water management
Peptide-based ambidextrous bifunctional gelator: applications in oil spill recovery and removal of toxic organic dyes for waste water management Open
A low molecular weight peptide-based ambidextrous gelator molecule has been discovered for efficient control of water pollution. The gelator molecules can gel various organic solvents with diverse polarity, e.g. n -hexane, n -octane, petro…
View article: Amino acid-based amphiphilic hydrogels: metal ion induced tuning of mechanical and thermal stability
Amino acid-based amphiphilic hydrogels: metal ion induced tuning of mechanical and thermal stability Open
A phenylalanine based gelator was found to form a hydrogel in phosphate buffer solution. Its mechanical properties are influenced by a range of metal ions.
View article: Supplementary material from "Peptide-based ambidextrous bifunctional gelator: applications in oil spill recovery and removal of toxic organic dyes for waste water management"
Supplementary material from "Peptide-based ambidextrous bifunctional gelator: applications in oil spill recovery and removal of toxic organic dyes for waste water management" Open
A low molecular weight peptide-based ambidextrous gelator molecule has been discovered for efficient control of water pollution. The gelator molecules can gel various organic solvents with diverse polarity, e.g. n-hexane, n-octane, petrole…