Adriana Alberti
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View article: Towards a comprehensive barcoding and phylogenomic reference for the European arctic-alpine flora
Towards a comprehensive barcoding and phylogenomic reference for the European arctic-alpine flora Open
We present a decade-long research initiative of biodiversity genomics, which aimed at sequencing all vascular plant species occurring in the biodiversity hotspot of the European Alps, along with related lineages occurring in other mountain…
View article: Italian interim analysis of the multinational, post-authorisation safety study (NISSO) to assess the long-term safety of sonidegib in patients with locally advanced basal cell carcinoma: focus on time to onset of adverse events
Italian interim analysis of the multinational, post-authorisation safety study (NISSO) to assess the long-term safety of sonidegib in patients with locally advanced basal cell carcinoma: focus on time to onset of adverse events Open
View article: The NEREA Augmented Observatory: an integrative approach to marine coastal ecology
The NEREA Augmented Observatory: an integrative approach to marine coastal ecology Open
The NEREA (Naples Ecological REsearch for Augmented observatories) initiative aims to establish an augmented observatory in the Gulf of Naples (GoN), designed to advance the understanding of marine ecosystems through a holistic approach. I…
View article: Mediator complex in transcription regulation and DNA repair: Relevance for human diseases
Mediator complex in transcription regulation and DNA repair: Relevance for human diseases Open
The Mediator complex is an essential coregulator of RNA polymerase II transcription. More recent developments suggest Mediator functions as a link between transcription regulation, genome organisation and DNA repair mechanisms including nu…
View article: Changes in body composition in early breast cancer patients treated with aromatase inhibitors
Changes in body composition in early breast cancer patients treated with aromatase inhibitors Open
Purpose The aim of the study was to analyze the modification of total and regional body composition in early breast cancer patients treated with aromatase inhibitors (AIs). Methods This is a prospective, single-center, observational, longi…
View article: A genome-wide comprehensive analysis of nucleosome positioning in yeast
A genome-wide comprehensive analysis of nucleosome positioning in yeast Open
In eukaryotic cells, the one-dimensional DNA molecules need to be tightly packaged into the spatially constraining nucleus. Folding is achieved on its lowest level by wrapping the DNA around nucleosomes. Their arrangement regulates other n…
View article: Multiple genomic solutions for local adaptation in two closely related species (sheep and goats) facing the same climatic constraints
Multiple genomic solutions for local adaptation in two closely related species (sheep and goats) facing the same climatic constraints Open
The question of how local adaptation takes place remains a fundamental question in evolutionary biology. The variation of allele frequencies in genes under selection over environmental gradients remains mainly theoretical and its empirical…
View article: A Genome-Wide Comprehensive Analysis of Nucleosome Positioning in Yeast
A Genome-Wide Comprehensive Analysis of Nucleosome Positioning in Yeast Open
In eukaryotic cells, the one-dimensional DNA molecules need to be tightly packaged into the spatially constraining nucleus. Folding is achieved on its lowest level by wrapping the DNA around nucleosomes. Their positioning regulates other n…
View article: Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition
Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition Open
Coral reef science is a fast-growing field propelled by the need to better understand coral health and resilience to devise strategies to slow reef loss resulting from environmental stresses. Key to coral resilience are the symbiotic inter…
View article: Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters
Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters Open
Chromatin organization is crucial for transcriptional regulation in eukaryotes. Mediator is an essential and conserved co-activator thought to act in concert with chromatin regulators. However, it remains largely unknown how their function…
View article: The complete plastome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the <i>Glandora</i> genus
The complete plastome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the <i>Glandora</i> genus Open
Glandora prostrata (Loisel.) D.C.Thomas (Thomas et al., 2008), besides being a common plant of western and south-western Europe and north-western Africa, is a species with a wealth of reported uses in traditional and folk medicine. …
View article: The complete plastome of <i>Centaurium erythraea</i> subsp. <i>majus</i> (Hoffmanns. & Link) M.Laínz (Gentianaceae), the first chloroplast genome belonging to the <i>Centaurium</i> genus
The complete plastome of <i>Centaurium erythraea</i> subsp. <i>majus</i> (Hoffmanns. & Link) M.Laínz (Gentianaceae), the first chloroplast genome belonging to the <i>Centaurium</i> genus Open
Despite having many historically reported ethnomedicinal uses, Centaurium erythraea Rafn (Rafn and Buchs, 1800; common centaury) also produces cytotoxic secondary metabolites, and its presence should be carefully monitored. In this …
View article: The complete plastome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the <i>Glandora</i> genus
The complete plastome of <i>Glandora prostrata</i> subsp. <i>lusitanica</i> (Samp.) D.C.Thomas (Boraginaceae), the first chloroplast genome belonging to the <i>Glandora</i> genus Open
Glandora prostrata (Loisel.) D.C.Thomas (Thomas et al., 2008), besides being a common plant of western and south-western Europe and north-western Africa, is a species with a wealth of reported uses in traditional and folk medicine. …
View article: Reply to: When did mammoths go extinct?
Reply to: When did mammoths go extinct? Open
View article: High resolution ancient sedimentary DNA shows that alpine plant diversity is associated with human land use and climate change
High resolution ancient sedimentary DNA shows that alpine plant diversity is associated with human land use and climate change Open
View article: Postglacial species arrival and diversity buildup of northern ecosystems took millennia
Postglacial species arrival and diversity buildup of northern ecosystems took millennia Open
What drives ecosystem buildup, diversity, and stability? We assess species arrival and ecosystem changes across 16 millennia by combining regional-scale plant sedimentary ancient DNA from Fennoscandia with near-complete DNA and trait datab…
View article: Author Correction: Late Quaternary dynamics of Arctic biota from ancient environmental genomics
Author Correction: Late Quaternary dynamics of Arctic biota from ancient environmental genomics Open
View article: Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence
Genomic adaptation of the picoeukaryote Pelagomonas calceolata to iron-poor oceans revealed by a chromosome-scale genome sequence Open
The smallest phytoplankton species are key actors in oceans biogeochemical cycling and their abundance and distribution are affected with global environmental changes. Among them, algae of the Pelagophyceae class encompass coastal species …
View article: Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition
Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition Open
Coral reef science is a fast-growing field propelled by the need to better understand coral health and resilience to devise strategies to slow reef loss resulting from environmental stresses. Key to coral resilience are the symbiotic inter…
View article: Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans
Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans Open
The diversity of microbes and their transmission between ocean and atmosphere are poorly understood despite the implications for microbial global dispersion and biogeochemical processes. Here, we survey the genetic diversity of airborne an…
View article: Tempo and drivers of plant diversification in the European mountain system
Tempo and drivers of plant diversification in the European mountain system Open
View article: Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome
Cryptic and abundant marine viruses at the evolutionary origins of Earth’s RNA virome Open
Whereas DNA viruses are known to be abundant, diverse, and commonly key ecosystem players, RNA viruses are insufficiently studied outside disease settings. In this study, we analyzed ≈28 terabases of Global Ocean RNA sequences to expand Ea…
View article: Male differentiation in the marine copepod Oithona nana reveals the development of a new nervous ganglion linked to Lin12-Notch-Repeat protein-associated proteolysis
Male differentiation in the marine copepod Oithona nana reveals the development of a new nervous ganglion linked to Lin12-Notch-Repeat protein-associated proteolysis Open
Copepods are the most numerous animals and play an essential role in the marine trophic web and biogeochemical cycles. The genus Oithona is described as having the highest numerical density, as the most cosmopolite copepod. The Oithona mal…
View article: Author Correction: Late Quaternary dynamics of Arctic biota from ancient environmental genomics
Author Correction: Late Quaternary dynamics of Arctic biota from ancient environmental genomics Open
View article: Male Differentiation in the Marine Copepod Oithona Nana Reveals the Development of a New Nervous Ganglion Linked to Lin12-Notch-Repeat Protein-Associated Proteolysis
Male Differentiation in the Marine Copepod Oithona Nana Reveals the Development of a New Nervous Ganglion Linked to Lin12-Notch-Repeat Protein-Associated Proteolysis Open
Background Copepods are among the most numerous animals, and play an essential role in the marine trophic web and biogeochemical cycles. The genus Oithona is described as having the highest density of copepods, and as being the most cosmop…
View article: Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans
Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans Open
Environmental Ontology linking the Tara-Pacific (Table S13) and Atlantic (Table S14) Air samples' ENVO terms with ASV sequences. Each ASV is assigned to several ENVO terms, giving a relative constitution for each of the terms. Table S13 de…
View article: Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans
Terrestrial and marine influence on atmospheric bacterial diversity over the north Atlantic and Pacific Oceans Open
Environmental Ontology linking the Tara-Pacific (Table S13) and Atlantic (Table S14) Air samples' ENVO terms with ASV sequences. Each ASV is assigned to several ENVO terms, giving a relative constitution for each of the terms. Table S13 de…
View article: Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding Open
Background The sequencing of the wheat (Triticum aestivum) genome has been a methodological challenge for many years owing to its large size (15.5 Gb), repeat content, and hexaploidy. Many initiatives aiming at obtaining a reference genome…
View article: Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation
Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation Open
The extent to which genomic convergence shapes locally adapted phenotypes in different species remains a fundamental question in evolutionary biology. To bring new insights to this debate we set up a framework which aimed to compare the ad…
View article: VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity
VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity Open