Alexis Canino
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View article: Phytoplancton des plans d'eau d'Outre-Mer: développement d'outils de monitoring basés sur l'ADN Livrable 3 : « Application de l'approche ADNe pour recenser le phytoplancton des plans d'eau d'Outre-Mer: méthodes et premiers résultats »
Phytoplancton des plans d'eau d'Outre-Mer: développement d'outils de monitoring basés sur l'ADN Livrable 3 : « Application de l'approche ADNe pour recenser le phytoplancton des plans d'eau d'Outre-Mer: méthodes et premiers résultats » Open
View article: Which barcode to decipher freshwater microalgal assemblages? Tests on mock communities
Which barcode to decipher freshwater microalgal assemblages? Tests on mock communities Open
DNA metabarcoding can be a promising alternative to microscopy for analysing phytoplankton, a key ecological indicator for freshwater ecosystems. The aim of this study was to evaluate the performance of different barcodes and associated pr…
View article: Environmental filtering and mass effect are two important processes driving lake benthic diatoms: Results of a <scp>DNA</scp> metabarcoding study in a large lake
Environmental filtering and mass effect are two important processes driving lake benthic diatoms: Results of a <span>DNA</span> metabarcoding study in a large lake Open
Environmental filtering is often found to dominate assembly rules in diatoms. These microalgae are diverse, especially at subspecies level, and tend to exhibit a niche phylogenetic conservatism. Therefore, other rules, such as competition …
View article: Phytool, a ShinyApp to homogenise taxonomy of freshwater microalgae from DNA barcodes and microscopic observations
Phytool, a ShinyApp to homogenise taxonomy of freshwater microalgae from DNA barcodes and microscopic observations Open
Methods for biomonitoring of freshwater phytoplankton are evolving rapidly with eDNA-based methods, offering great complementarity with microscopy. Metabarcoding approaches have been more commonly used over the last years, with a continuou…
View article: Phytoplancton des plans d'eau d'Outre-Mer : développement d'outils de monitoring basés sur l'ADN - Livrable 2 : «Phytoplancton DOM : première application du protocole de terrain et comparaisons entre microscopie/ADNe »
Phytoplancton des plans d'eau d'Outre-Mer : développement d'outils de monitoring basés sur l'ADN - Livrable 2 : «Phytoplancton DOM : première application du protocole de terrain et comparaisons entre microscopie/ADNe » Open
View article: Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life
Metadata standards and practical guidelines for specimen and DNA curation when building barcode reference libraries for aquatic life Open
DNA barcoding and metabarcoding is increasingly used to effectively and precisely assess and monitor biodiversity in aquatic ecosystems. As these methods rely on data availability and quality of barcode reference libraries, it is important…
View article: Phytoplancton des plans d’eau d’Outre-Mer : développement d’outils de monitoring basés sur l’ADN
Phytoplancton des plans d’eau d’Outre-Mer : développement d’outils de monitoring basés sur l’ADN Open