Ali Yazdizadeh Kharrazi
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View article: When less is more: sketching with minimizers in genomics
When less is more: sketching with minimizers in genomics Open
The exponential increase in sequencing data calls for conceptual and computational advances to extract useful biological insights. One such advance, minimizers, allows for reducing the quantity of data handled while maintaining some of its…
View article: Orthology inference at scale with FastOMA
Orthology inference at scale with FastOMA Open
The surge in genome data, with ongoing efforts aiming to sequence 1.5M eukaryotes in a decade, could revolutionise genomics, revealing the origins, evolution, and genetic innovations of biological processes. Yet, traditional genomics metho…
View article: Personalized predictions of adverse side effects of the COVID-19 vaccines
Personalized predictions of adverse side effects of the COVID-19 vaccines Open
Using a large cohort of recipients vaccinated with COVID-19 vaccines, a novel and personalized strategy was established to predict the occurrence of the most common adverse side effects with high accuracy. This technique can serve as a too…
View article: A versatile active learning workflow for optimization of genetic and metabolic networks
A versatile active learning workflow for optimization of genetic and metabolic networks Open
The study, engineering and application of biological networks require practical and efficient approaches. Current optimization efforts of these systems are often limited by wet lab labor and cost, as well as the lack of convenient, easily …