A. Majumdar
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View article: Immunoresistant to immunosensitive - Histotripsy’s unique potential to overcome resistance
Immunoresistant to immunosensitive - Histotripsy’s unique potential to overcome resistance Open
Histotripsy is a novel, non-thermal ultrasound-based technology that utilizes focused acoustic waves to mechanically destroy tumor tissue. This review examines histotripsy's potential to overcome immunoresistance and treat metastatic cance…
View article: Evaluating LLMs for Demographic-Targeted Social Bias Detection: A Comprehensive Benchmark Study
Evaluating LLMs for Demographic-Targeted Social Bias Detection: A Comprehensive Benchmark Study Open
Large-scale web-scraped text corpora used to train general-purpose AI models often contain harmful demographic-targeted social biases, creating a regulatory need for data auditing and developing scalable bias-detection methods. Although pr…
View article: EEG Foundation Challenge: From Cross-Task to Cross-Subject EEG Decoding
EEG Foundation Challenge: From Cross-Task to Cross-Subject EEG Decoding Open
Current electroencephalogram (EEG) decoding models are typically trained on small numbers of subjects performing a single task. Here, we introduce a large-scale, code-submission-based competition comprising two challenges. First, the Trans…
View article: Living Medicines Engineered to Fight: A Comprehensive Review on CAR T-Cell Therapy
Living Medicines Engineered to Fight: A Comprehensive Review on CAR T-Cell Therapy Open
The plethora of advancements in cancer treatment has resulted in designing unique signatures and personalized therapies, tailored to patient-specific needs, using medications that target specific markers on cancer cells or even retrain the…
View article: Creating intelligent cyberinfrastructure for democratizing AI
Creating intelligent cyberinfrastructure for democratizing AI Open
Artificial intelligence (AI) has the potential for vast societal and economic gain; yet applications are developed in a largely ad hoc manner, lacking coherent, standardized, modular, and reusable infrastructures. The NSF‐funded Intelligen…
View article: Neural Mosaics: Detecting Aberrant Brain Interactions using Algebraic Topology and Generative Artificial Intelligence.
Neural Mosaics: Detecting Aberrant Brain Interactions using Algebraic Topology and Generative Artificial Intelligence. Open
Epilepsy affects over 50 million persons worldwide, with less than 50% achieving long-term success following surgery. Traditional electrophysiology signal-based seizure detection methods are resource-intensive, laborious, and overlook mult…
View article: Data-driven estimation of spatial electrical property of multi-compartment models with neuronal morphology by replica exchange Monte Carlo method
Data-driven estimation of spatial electrical property of multi-compartment models with neuronal morphology by replica exchange Monte Carlo method Open
One of the neuron models that simulate the electrical activity of neurons, the multi-compartment model, has spatial electrical properties that control nonlinear spatiotemporal dynamics and can reproduce nonlinear electrical responses with …
View article: Health technology assessment for digital health Technologies in India: a framework for action
Health technology assessment for digital health Technologies in India: a framework for action Open
Objectives The aim of this study is to understand the path for establishing digital health technologies-health technology assessment (DHT-HTA) in India. Methods A rapid review of HTA and DHT frameworks on PubMed (MEDLINE) and Google Schola…
View article: Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering
Cybershuttle: An End-to-End Cyberinfrastructure Continuum to Accelerate Discovery in Science and Engineering Open
We introduce Cybershuttle, a novel user-facing cyberinfrastructure that offers researchers seamless access to various resources, thereby enhancing their productivity.
View article: Transverse Fluctuations and Their Effects on the Stable Functioning of Semiconductor Devices
Transverse Fluctuations and Their Effects on the Stable Functioning of Semiconductor Devices Open
Semiconductor plasma is often found in chaotic unpredictable motion which shows some anomalous behaviors providing multiple challenges to work with the instabilities in a semiconductor device. Experimental studies have shown that these ins…
View article: NEMAR: An open access data, tools, and compute resource operating on NeuroElectroMagnetic data
NEMAR: An open access data, tools, and compute resource operating on NeuroElectroMagnetic data Open
To take advantage of recent and ongoing advances in large-scale computational methods, and to preserve the scientific data created by publicly funded research projects, data archives must be created as well as standards for specifying, ide…
View article: Expanse: Computing without Boundaries
Expanse: Computing without Boundaries Open
We describe the design motivation, architecture, deployment, and early operations of Expanse, a 5 Petaflop, heterogenous HPC system that entered production as an NSF-funded resource in December 2020 and will be operated on behalf of the na…
View article: The Open EEGLAB portal
The Open EEGLAB portal Open
International audience
View article: The Neuroscience Gateway
The Neuroscience Gateway Open
The NSF funded Neuroscience Gateway (NSG) has been in operation since the early 2013. We originally designed NSG to reduce technical and administrative barriers that exist to using high performance computing resources for computational neu…
View article: Open Source Brain: a collaborative resource for visualizing, analyzing, simulating and developing standardized models of neurons and circuits
Open Source Brain: a collaborative resource for visualizing, analyzing, simulating and developing standardized models of neurons and circuits Open
Computational models are powerful tools for investigating brain function in health and disease. However, biologically detailed neuronal and circuit models are complex and implemented in a range of specialized languages, making them inacces…
View article: SciGaP: SI2 PI 2018 Meeting Poster
SciGaP: SI2 PI 2018 Meeting Poster Open
Science Gateways are virtual environments that dramatically accelerate scientific discovery by enabling scientific communities to utilize distributed computational and data resources (that is, cyberinfrastructure). Successful Science Gatew…
View article: Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis
Evolutionary algorithm optimization of biological learning parameters in a biomimetic neuroprosthesis Open
Biomimetic simulation permits neuroscientists to better understand the complex neuronal dynamics of the brain. Embedding a biomimetic simulation in a closed-loop neuroprosthesis, which can read and write signals from the brain, will permit…
View article: Understanding the Evolving Cyberinfrastructure Needs of the Neuroscience Community
Understanding the Evolving Cyberinfrastructure Needs of the Neuroscience Community Open
In this paper, we first present a brief summary of the Neuroscience Gateway (NSG) which has been in operation since 2013. NSG is providing computational neuroscientists access to Extreme Science and Engineering Discovery Environment (XSEDE…
View article: Neuroscience Gateway � Cyberinfrastructure Providing Supercomputing Resources for Large Scale Computational Neuroscience Research
Neuroscience Gateway � Cyberinfrastructure Providing Supercomputing Resources for Large Scale Computational Neuroscience Research Open
Event Abstract Back to Event Neuroscience Gateway – Cyberinfrastructure Providing Supercomputing Resources for Large Scale Computational Neuroscience Research Amitava Majumdar1*, Subhashini Sivagnanam1*, Nicholas T. Carnevale2, Kenneth Yos…