Andreas Noack
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View article: MixedModels.jl
MixedModels.jl Open
A Julia package for fitting (statistical) mixed-effects models
View article: Supplementary Figure 1 and Table 1 Legends from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Supplementary Figure 1 and Table 1 Legends from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Supplementary Figure 1 and Table 1 Legends from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
View article: Supplementary Figure 1 and Table 1 Legends from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Supplementary Figure 1 and Table 1 Legends from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Supplementary Figure 1 and Table 1 Legends from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
View article: Data from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Data from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Chronic inflammation has been implicated in the pathogenesis of many severe autoimmune disorders, as well as in diabetes, pulmonary diseases, and cancer. Inflammation accompanies most solid cancers including pancreatic ductal adenocarcinom…
View article: Data from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Data from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Chronic inflammation has been implicated in the pathogenesis of many severe autoimmune disorders, as well as in diabetes, pulmonary diseases, and cancer. Inflammation accompanies most solid cancers including pancreatic ductal adenocarcinom…
View article: Supplementary Figure 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Supplementary Figure 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Supplementary Figure 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
View article: Supplementary Table 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Supplementary Table 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Supplementary Table 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
View article: Supplementary Figure 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Supplementary Figure 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Supplementary Figure 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
View article: Supplementary Table 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
Supplementary Table 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis Open
Supplementary Table 1 from Anti–Tumor Necrosis Factor Therapy Inhibits Pancreatic Tumor Growth and Metastasis
View article: JuliaStats/Distributions.jl: v0.24.10
JuliaStats/Distributions.jl: v0.24.10 Open
Distributions v0.24.10 Diff since v0.24.9 Merged pull requests: Revert update of show (#1244) (@devmotion)
View article: JuliaNLSolvers/Optim.jl: v1.2.1
JuliaNLSolvers/Optim.jl: v1.2.1 Open
Optim v1.2.1 Diff since v1.2.0 Closed issues: Optim 1.0, 1.1 and Julia 1.0 (#863) BarrierWrapper has no field f_calls (#865) show_trace panic with Optim.Brent() (#867) Documentation: Something is wrong with the Matlab Simplexer example: (#…
View article: JuliaData/DataFrames.jl: v0.22.2
JuliaData/DataFrames.jl: v0.22.2 Open
DataFrames v0.22.2 Diff since v0.22.1 Closed issues: ComposedFunction not found on julia 1.5.3 (#2562) :auto does not work in DataFrame() (#2565) How to cite this package? (#2568) ArgumentError: syntax df[column] is not supported use df[!,…
View article: Accelerated Predictive Healthcare Analytics with Pumas, A High Performance Pharmaceutical Modeling and Simulation Platform
Accelerated Predictive Healthcare Analytics with Pumas, A High Performance Pharmaceutical Modeling and Simulation Platform Open
Pharmacometric modeling establishes causal quantitative relationships between administered dose, tissue exposures, desired and undesired effects and patient’s risk factors. These models are employed to de-risk drug development and guide pr…
View article: JuliaData/DataFrames.jl: v0.21.8
JuliaData/DataFrames.jl: v0.21.8 Open
DataFrames v0.21.8 Diff since v0.21.7 Closed issues: DOC: comparison between Datafeames.jl, pandas, and r data.fame objects (#392) Dataframes with wide columns have poor plain/text representations (#1272) Cheat sheet for R users. (#1530) C…
View article: JuliaStats/MixedModels.jl: v2.2.0
JuliaStats/MixedModels.jl: v2.2.0 Open
Miscellaneous Repository now owned by the JuliaStats organization ## New Features New zerocorr function for individual random-effects terms VarCorr display shows systematic zeros in correlations as . Allow recent versions of BlockArrays an…
View article: Fast computation of the principal components of genotype matrices in Julia
Fast computation of the principal components of genotype matrices in Julia Open
Finding the largest few principal components of a matrix of genetic data is a common task in genome-wide association studies (GWASs), both for dimensionality reduction and for identifying unwanted factors of variation. We describe a simple…
View article: dmbates/MixedModels.jl: Add adaptive Gauss-Hermite quadrature
dmbates/MixedModels.jl: Add adaptive Gauss-Hermite quadrature Open
add and document adaptive Gauss-Hermite quadrature for evaluating the deviance of a GLMM add Compat to the REQUIRE file
View article: The interaction of multiple stellar winds in stellar clusters: potential flow
The interaction of multiple stellar winds in stellar clusters: potential flow Open
Context. While several studies have investigated large-scale cluster winds resulting from an intra-cluster interaction of multiple stellar winds, as yet they have not provided details of the bordering flows inside a given cluster. Aims. Th…
View article: JuliaNLSolvers/Optim.jl: JOSS Article
JuliaNLSolvers/Optim.jl: JOSS Article Open
Optimization functions for Julia
View article: Cataloging the Visible Universe through Bayesian Inference at Petascale
Cataloging the Visible Universe through Bayesian Inference at Petascale Open
Astronomical catalogs derived from wide-field imaging surveys are an important tool for understanding the Universe. We construct an astronomical catalog from 55 TB of imaging data using Celeste, a Bayesian variational inference code writte…
View article: dmbates/MixedModels.jl: Use BlockedSparse type to reduce allocation
dmbates/MixedModels.jl: Use BlockedSparse type to reduce allocation Open
Reduce memory allocation and garbage collection in models with multiple vector-valued random effects Add tests and test coverage Add benchmarks
View article: dmbates/MixedModels.jl: Fix loglikelihood calculation with weights
dmbates/MixedModels.jl: Fix loglikelihood calculation with weights Open
Fixes #89 Adds more benchmarks Introduces and uses model_response(mf::ModelFrame, d::Distribution) to convert a binary PooledDataArray response to a 0/1 floating point vector. This should be done in DataFrames and a pull request will be ma…
View article: dmbates/MixedModels.jl: Allow 3 or more nested factors
dmbates/MixedModels.jl: Allow 3 or more nested factors Open
A Julia package for fitting (statistical) mixed-effects models
View article: dmbates/MixedModels.jl: Expand `OptSummary` and use for passing opt args
dmbates/MixedModels.jl: Expand `OptSummary` and use for passing opt args Open
A Julia package for fitting (statistical) mixed-effects models
View article: dmbates/MixedModels.jl: Extend OptSummary
dmbates/MixedModels.jl: Extend OptSummary Open
extend OptSummary to include more information and to convey settings for the algorithm add show method for OptSummary clean up logic on last evaluation of objective to ensure the structure is consistent with xmin clean up code in fit! meth…
View article: dmbates/MixedModels.jl: Speed increase
dmbates/MixedModels.jl: Speed increase Open
Allocation profiling showed that two downdate! methods were being slowed down because the compiler had insufficient type information on ReMat types. Expanding the template parameters for these types resulted in considerable speed improveme…
View article: dmbates/MixedModels.jl: Drop Julia v0.4.x and earlier support
dmbates/MixedModels.jl: Drop Julia v0.4.x and earlier support Open
A Julia package for fitting (statistical) mixed-effects models
View article: julia v0.5.0-rc3
julia v0.5.0-rc3 Open
We have been fixing 0.5-critical bugs since the last release candidate, and are now releasing 0.5.0-rc3. Links to binary installers will be sent to the julia-users and julia-news mailing lists. We have branched for release-0.5 - new develo…
View article: julia v0.5.0-rc2
julia v0.5.0-rc2 Open
We have been fixing 0.5-critical bugs since the last release candidate, and are now releasing 0.5.0-rc2. Links to binary installers will be sent to the julia-users and julia-news mailing lists. We have branched for release-0.5 - new develo…