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View article: The complete genome of a songbird
The complete genome of a songbird Open
Bird genomes are the smallest among amniotes, but remain challenging to assemble due to their structural complexity. This study presents the first fully phased, diploid, telomere-to-telomere (T2T) reference genome for the zebra finch ( Tae…
View article: Quaternary Habitat Fluctuations and Demographic Dynamics in Turtles Inferred From Environmental Niche Modelling and Whole Genome Data
Quaternary Habitat Fluctuations and Demographic Dynamics in Turtles Inferred From Environmental Niche Modelling and Whole Genome Data Open
Quaternary climatic fluctuations had a substantial influence on ecosystems, species distribution, phenology and genetic diversity, driving extinction, adaptation and demographic shifts during glacial periods and postglacial expansions. Int…
View article: Evaluation of sequencing reads at scale using rdeval
Evaluation of sequencing reads at scale using rdeval Open
Motivation Large sequencing datasets are being produced and deposited into public archives at unprecedented rates. The availability of tools that can reliably and efficiently generate and store sequencing read summary statistics has become…
View article: The genome sequence of Glossophaga mutica (Chiroptera, Phyllostomidae, Glossophaginae; Merriam, 1898)
The genome sequence of Glossophaga mutica (Chiroptera, Phyllostomidae, Glossophaginae; Merriam, 1898) Open
We present a genome assembly from a specimen of Barbarea vulgaris (winter-cress or yellow rocket; Streptophyta; Magnoliopsida; Brassicales; Brassicaceae). The genome sequence has a total length of 246.25 megabases. Most of the assembly (99…
View article: Evaluation of sequencing reads at scale using rdeval
Evaluation of sequencing reads at scale using rdeval Open
Motivation: Large sequencing data sets are produced and deposited into public archives at unprecedented rates. The availability of tools that can reliably and efficiently generate and store sequencing read summary statistics has become cri…
View article: Diagnostic Associations of Processing Speed in a Transdiagnostic, Pediatric Sample
Diagnostic Associations of Processing Speed in a Transdiagnostic, Pediatric Sample Open
Introduction: The present study examines the relationships between processing speed (PS), mental health disorders, and learning disorders. Prior work has tended to explore relationships between PS deficits and specific diagnoses in isolati…
View article: Associations between Processing Speed and Psychopathology in a Transdiagnostic, Pediatric Sample
Associations between Processing Speed and Psychopathology in a Transdiagnostic, Pediatric Sample Open
Objective The present study sought to examine the relationships between processing speed (PS), mental health disorders, and learning disorders. Prior work has tended to explore relationships between PS deficits and individual diagnoses (i.…
View article: Clinical Perspective on Passive Audio Vocal Measurement in the Evaluation of Selective Mutism
Clinical Perspective on Passive Audio Vocal Measurement in the Evaluation of Selective Mutism Open
Selective Mutism (SM) is an anxiety disorder often diagnosed in early childhood and characterized by persistent failure to speak in certain social situations but not others. Diagnosing SM and monitoring treatment response can be quite comp…
View article: Passive Audio Vocal Capture and Measurement in the Evaluation of Selective Mutism
Passive Audio Vocal Capture and Measurement in the Evaluation of Selective Mutism Open
Selective Mutism (SM) is an anxiety disorder often diagnosed in early childhood and characterized by persistent failure to speak in certain social situations but not others. Diagnosing SM and monitoring treatment response can be quite comp…
View article: An open resource for nonhuman primate imaging
An open resource for nonhuman primate imaging Open
Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past tw…
View article: Assessment of the impact of shared data on the scientific literature
Assessment of the impact of shared data on the scientific literature Open
Data sharing is increasingly recommended as a means of accelerating science by facilitating collaboration, transparency, and reproducibility. While few oppose data sharing philosophically, a range of barriers deter most researchers from im…
View article: Assessing actimeters for inclusion in the Healthy Brain Network
Assessing actimeters for inclusion in the Healthy Brain Network Open
Background The Healthy Brain Network is an openly shared pediatric psychiatric biobank with a target of 10,000 participants between the ages of 5 and 21, inclusively In adding ecological actimetry to the Healthy Brain Network, we intend to…
View article: A large, open source dataset of stroke anatomical brain images and manual lesion segmentations
A large, open source dataset of stroke anatomical brain images and manual lesion segmentations Open
Stroke is the leading cause of adult disability worldwide, with up to two-thirds of individuals experiencing long-term disabilities. Large-scale neuroimaging studies have shown promise in identifying robust biomarkers (e.g., measures of br…
View article: The Anatomical Tracings of Lesions after Stroke (ATLAS) Dataset - Release 2.0, 2021
The Anatomical Tracings of Lesions after Stroke (ATLAS) Dataset - Release 2.0, 2021 Open
To access this data collection, please click on the Restricted Data button above. You will need to download and complete the data use agreement and then email it to [email protected]. The instructions are in the form. The Anatomical …