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QTL mapping for aggressiveness variation in<i>F. graminearum</i>revealed one causal mutation in FgVe1 velvet protein Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Sylvain Chéreau, Enric Zehraoui , et al. · 2020

Fusarium graminearum is one of the most frequent causal agents of the Fusarium Head Blight in the world, a cereal disease spread throughout the world, reducing grain production and quality. F. graminearum isolates are genetically and pheno…

Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Our results highlight a remarkable level of polymorphism in the genome of F. graminearum distributed in a specific pattern. Indeed, the landscape of genomic diversity follows a bi-partite organization of the genome according to polymorphis…

Additional file 8: Table S6. of Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Annotation of genes previously predicted to belong to secondary metabolite clusters. Table S7: Summary of known Tri genes implicated in trichothecene of type B (TCTB) production. Table S8: Annotation of Tri genes and surrounding sequences …

Additional file 5: Table S4. of Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Details of the polymorphic islands delineated during the analysis. (XLSX 15 kb)

Additional file 1: Table S1. of Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Metrics and statistics of read sequencing and alignment on the reference genome (version RRES V4.0). Figure S1: Minimum and maximum read depth (mean number of reads at the position) calculated along sliding 100Â kb bin windows of the four …

Additional file 2: Table S2. of Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Genes described the reference genome (RRES v4.0) not covered by reads in any isolate genomes. (XLSX 16 kb)

Additional file 6: Table S5. of Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Gene annotation according to the polymorphism detected in the analysis. (XLSX 4054 kb)

Additional file 3: Table S3. of Landscape of genomic diversity and host adaptation in Fusarium graminearum Open

Benoît Laurent, Magalie Moinard, Cathy Spataro, Nadia Ponts, Christian Barreau , et al. · 2017

Information and annotations for all genetic variants detected in this analysis. (XLSX 32569 kb)

High‐resolution mapping of the recombination landscape of the phytopathogen <i>Fusarium graminearum</i> suggests two‐speed genome evolution Open

Benoît Laurent, Christos Palaiokostas, Cathy Spataro, Magalie Moinard, Enric Zehraoui , et al. · 2016

Summary Recombination is a major evolutionary force, increasing genetic diversity and permitting efficient coevolution of fungal pathogen(s) with their host(s). The ascomycete Fusarium graminearum is a devastating pathogen of cereal crops,…

The Genetic Linkage Map of the Medicinal Mushroom <i>Agaricus subrufescens</i> Reveals Highly Conserved Macrosynteny with the Congeneric Species <i>Agaricus bisporus</i> Open

Marie Foulongne‐Oriol, Manuela Rocha de Brito, Delphine Cabannes, Aurélien Clément, Cathy Spataro , et al. · 2016

Comparative linkage mapping can rapidly facilitate the transfer of genetic information from model species to orphan species. This macrosynteny analysis approach has been extensively used in plant species, but few example are available in f…

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