Chaehee Lee
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View article: Plastid Genome Assembly Using Long‐read data
Plastid Genome Assembly Using Long‐read data Open
Although plastid genome (plastome) structure is highly conserved across most seed plants, investigations during the past two decades have revealed several disparately related lineages that experienced substantial rearrangements. Most plast…
View article: Extreme somatic mutation variation through time and space in walnut clones
Extreme somatic mutation variation through time and space in walnut clones Open
Many plants, unlike most animals, can reproduce as clones 1 . Cloning plants is critical for agriculture 2,3 and biotechnology 4 , but the extent of somatic mutation arising during different propagation methods remains an important questio…
View article: Cell layer-specific modification of cell wall is associated with exo-mesocarp split in pistachio (<i>Pistacia vera L</i>.)
Cell layer-specific modification of cell wall is associated with exo-mesocarp split in pistachio (<i>Pistacia vera L</i>.) Open
Pistachio ( Pistacia vera ) is a drought and salinity-tolerant perennial whose fruit features a fleshy exo-mesocarp, or “hull,” that protects the kernel. Hull development and degradation are key to kernel quality, yet the anatomy and mecha…
View article: A well‐annotated genome of <i>Apium graveolens</i> var. <i>dulce</i> cv. Challenger, a celery with resistance to <i>Fusarium oxysporum</i> f. sp. <i>apii</i> race 2
A well‐annotated genome of <i>Apium graveolens</i> var. <i>dulce</i> cv. Challenger, a celery with resistance to <i>Fusarium oxysporum</i> f. sp. <i>apii</i> race 2 Open
SUMMARY Celery (A pium graveolens var. dulce) production can be limited by the fungal pathogen Fusarium oxysporum f. sp. apii ( Foa ), particularly at temperatures above 22°C. Because celery has a narrow genetic base, an intraspecific admi…
View article: Convergent evolution of epigenome recruited DNA repair across the Tree of Life
Convergent evolution of epigenome recruited DNA repair across the Tree of Life Open
Mutations fuel evolution while also causing diseases like cancer. Epigenome-targeted DNA repair can help organisms protect important genomic regions from mutation. However, the adaptive value, mechanistic diversity, and evolution of epigen…
View article: Convergent evolution of epigenome recruited DNA repair across the Tree of Life
Convergent evolution of epigenome recruited DNA repair across the Tree of Life Open
Mutations fuel evolution while also causing diseases like cancer. Epigenome-targeted DNA repair can help organisms protect important genomic regions from mutation. However, the adaptive value, mechanistic diversity, and evolution of epigen…
View article: In a nutshell: pistachio genome and kernel development
In a nutshell: pistachio genome and kernel development Open
Summary Pistachio is a sustainable nut crop with exceptional climate resilience and nutritional value. However, the molecular processes underlying pistachio nut development and nutritional traits are largely unknown, compounded by limited …
View article: Well‐resolved phylogeny supports repeated evolution of keel flowers as a synergistic contributor to papilionoid legume diversification
Well‐resolved phylogeny supports repeated evolution of keel flowers as a synergistic contributor to papilionoid legume diversification Open
Summary The butterfly‐shaped keel flower is a highly successful floral form in angiosperms. These flowers steer the mechanical interaction with bees and thus are hypothesized to accelerate pollinator‐driven diversification. The exceptional…
View article: Convergent evolution of epigenome recruited DNA repair across the Tree of Life
Convergent evolution of epigenome recruited DNA repair across the Tree of Life Open
Mutations fuel evolution while also causing diseases like cancer. Epigenome-targeted DNA repair can help organisms protect important genomic regions from mutation. However, the adaptive value, mechanistic diversity, and evolution of epigen…
View article: Well-resolved phylogeny supports repeated evolution of keel flowers as a synergistic contributor to papilionoid legume diversification
Well-resolved phylogeny supports repeated evolution of keel flowers as a synergistic contributor to papilionoid legume diversification Open
Summary The butterfly-shaped keel flower is a highly successful floral form in angiosperms. These flowers steer the mechanical interaction with bees and thus are hypothesized to accelerate pollinator-driven diversification. The exceptional…
View article: In a nutshell: pistachio genome and kernel development
In a nutshell: pistachio genome and kernel development Open
Pistachio is a sustainable nut crop with exceptional climate resilience and nutritional value. To advance pistachios as a future food source and a model system for hard-shelled fruits, we generated a chromosome-scale reference genome of th…
View article: Highly Resolved Papilionoid Legume Phylogeny Based on Plastid Phylogenomics
Highly Resolved Papilionoid Legume Phylogeny Based on Plastid Phylogenomics Open
Comprising 501 genera and around 14,000 species, Papilionoideae is not only the largest subfamily of Fabaceae (Leguminosae; legumes), but also one of the most extraordinarily diverse clades among angiosperms. Papilionoids are a major sourc…
View article: The chicken or the egg? Plastome evolution and a novel loss of the inverted repeat in papilionoid legumes
The chicken or the egg? Plastome evolution and a novel loss of the inverted repeat in papilionoid legumes Open
The plastid genome (plastome), while surprisingly constant in gene order and content across most photosynthetic angiosperms, exhibits variability in several unrelated lineages. During the diversification history of the legume family Fabace…
View article: Unprecedented Intraindividual Structural Heteroplasmy in Eleocharis (Cyperaceae, Poales) Plastomes
Unprecedented Intraindividual Structural Heteroplasmy in Eleocharis (Cyperaceae, Poales) Plastomes Open
Plastid genomes (plastomes) of land plants have a conserved quadripartite structure in a gene-dense unit genome consisting of a large inverted repeat that separates two single copy regions. Recently, alternative plastome structures were su…
View article: Plastome Sequencing of Ten Nonmodel Crop Species Uncovers a Large Insertion of Mitochondrial DNA in Cashew
Plastome Sequencing of Ten Nonmodel Crop Species Uncovers a Large Insertion of Mitochondrial DNA in Cashew Open
In plant evolution, intracellular gene transfer (IGT) is a prevalent, ongoing process. While nuclear and mitochondrial genomes are known to integrate foreign DNA via IGT and horizontal gene transfer (HGT), plastid genomes (plastomes) have …
View article: CO<sub>2</sub>Mineral Carbonation Reactor Analysis using Computational Fluid Dynamics: Internal Reactor Design Study for the Efficient Mixing of Solid Reactants in the Solution
CO<sub>2</sub>Mineral Carbonation Reactor Analysis using Computational Fluid Dynamics: Internal Reactor Design Study for the Efficient Mixing of Solid Reactants in the Solution Open
산화 칼슘 수용액을 통해 이산화탄소를 포집하는 수성 광물 탄산화 공정은 안정적으로 이산화탄소를 고립시킬 뿐 아니라 생성물의 부가 가치를 기대할 수 있는 대표적인 CCU (Carbon Capture & Utilization) 기술이다. 이 공정의 핵심은 고체 반응물인 산화칼슘의 용해 속도를 최대로 높이는 것인데, 이를 위해 반응기 전체에 고체 반응물이 균일하게 분포되도록 혼합하는 적절한 반응기의 설계가 필요하다. 본 논문에서는…