Changwei Shen
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View article: Molecular Mechanism by Which the BrFIT2–BrbHLH–BrIRT1 Module Synergistically Regulates Iron Absorption in <i>Brassica rapa</i> ssp. <i>Pekinensis</i>
Molecular Mechanism by Which the BrFIT2–BrbHLH–BrIRT1 Module Synergistically Regulates Iron Absorption in <i>Brassica rapa</i> ssp. <i>Pekinensis</i> Open
Iron is essential for plant photosynthesis and human health, yet Brassica rapa ssp. pekinensis exhibits significantly lower iron content compared to other leafy vegetables, and its iron uptake mechanisms are not well understood. This study…
View article: Vegetable Productivity, Soil Physicochemical and Biochemical Properties, and Microbiome in Response to Organic Substitution in an Intensive Greenhouse Production System
Vegetable Productivity, Soil Physicochemical and Biochemical Properties, and Microbiome in Response to Organic Substitution in an Intensive Greenhouse Production System Open
Partial substitution of mineral N fertilizer with manure (organic substitution) is considered as an effective way to reduce N input in intensive agroecosystems. Here, based on a 3-year field experiment, we assessed the influence of differe…
View article: <i>BrCNGC12</i> and <i>BrCNGC16</i> mediate Ca<sup>2+</sup> absorption and transport to enhance resistance to tipburn in Chinese cabbage
<i>BrCNGC12</i> and <i>BrCNGC16</i> mediate Ca<sup>2+</sup> absorption and transport to enhance resistance to tipburn in Chinese cabbage Open
Summary Tipburn is a common physiological disorder in leafy vegetables, significantly impairing crop growth and commercial value. It is widely recognized that Ca 2+ deficiency is a key factor triggering tipburn; however, the functions and …
View article: Phosphate Fertilizer Effects on Microbial Resource Limitations in Wheat Cropland: Evidence from Ecoenzymatic Stoichiometry
Phosphate Fertilizer Effects on Microbial Resource Limitations in Wheat Cropland: Evidence from Ecoenzymatic Stoichiometry Open
The application of phosphate fertilizers significantly influences soil microbial communities and nutrient cycling. Soil enzymes, which are sensitive to nutrient levels, play a critical role in microbial metabolism. However, the impact of p…
View article: Exploring Suitable Nitrification Inhibitor in an Intensively Cultivated Greenhouse Soil and Its Effect on the Abundance and Community of Soil Ammonia Oxidizers
Exploring Suitable Nitrification Inhibitor in an Intensively Cultivated Greenhouse Soil and Its Effect on the Abundance and Community of Soil Ammonia Oxidizers Open
The application of nitrification inhibitors (NIs) is an effective way to reduce soil nitrogen (N) losses and increase crop N uptake. Yet, the efficacy of NIs commonly varies with dosages, crop systems and soil environmental conditions. Hen…
View article: Soil Microbiome Response to Reduced Nitrogen Supply in an Over-Fertilized Wheat-Maize System
Soil Microbiome Response to Reduced Nitrogen Supply in an Over-Fertilized Wheat-Maize System Open
Excessive nitrogen (N) fertilization harms the diversity, structure, and function of the soil microbiome. Yet, whether such adverse effects can be repaired through reducing the subsequent N fertilization rate remains not completely clear s…
View article: Contrasting effects of organic materials versus their derived biochars on maize growth, soil properties and bacterial community in two type soils
Contrasting effects of organic materials versus their derived biochars on maize growth, soil properties and bacterial community in two type soils Open
The objective of this study was to assess the benefit of applying biochar instead of its feedstock in enhancing soil quality. To accomplish this, we investigated the short-term effects of two organic materials and their derived biochars on…
View article: Genome-wide identification of NHX (Na+/H+ antiporter) gene family in Cucurbita L. and functional analysis of CmoNHX1 under salt stress
Genome-wide identification of NHX (Na+/H+ antiporter) gene family in Cucurbita L. and functional analysis of CmoNHX1 under salt stress Open
Soil salinization, which is the accumulation of salt in soil, can have a negative impact on crop growth and development by creating an osmotic stress that can reduce water uptake and cause ion toxicity. The NHX gene family plays an importa…
View article: Transcriptome Analysis Revealed the Molecular Response Mechanism of Non-heading Chinese Cabbage to Iron Deficiency Stress
Transcriptome Analysis Revealed the Molecular Response Mechanism of Non-heading Chinese Cabbage to Iron Deficiency Stress Open
Iron is a trace metal that is found in animals, plants, and the human body. Human iron absorption is hampered by plant iron shortage, which leads to anemia. Leafy vegetables are one of the most direct and efficient sources of iron for huma…
View article: Genome-wide identification of alcohol dehydrogenase (ADH) gene family under waterlogging stress in wheat (<i>Triticum aestivum</i>)
Genome-wide identification of alcohol dehydrogenase (ADH) gene family under waterlogging stress in wheat (<i>Triticum aestivum</i>) Open
Background Alcohol dehydrogenase ( ADH ) plays an important role in plant survival under anaerobic conditions. Although some research about ADH in many plants have been carried out, the bioinformatics analysis of the ADH gene family from T…
View article: Genome-Wide Characterization and Expression Analysis of CAMTA Gene Family Under Salt Stress in Cucurbita moschata and Cucurbita maxima
Genome-Wide Characterization and Expression Analysis of CAMTA Gene Family Under Salt Stress in Cucurbita moschata and Cucurbita maxima Open
Cucurbita Linn. vegetables have a long history of cultivation and have been cultivated all over the world. With the increasing area of saline–alkali soil, Cucurbita Linn. is affected by salt stress, and calmodulin-binding transcription act…
View article: Additional file 1 of Identification of genes related to tipburn resistance in Chinese cabbage and preliminary exploration of its molecular mechanism
Additional file 1 of Identification of genes related to tipburn resistance in Chinese cabbage and preliminary exploration of its molecular mechanism Open
Additional file 1: Table S1. The data statistics of transcriptome sequencing. Table S2. Sequence alignment results between sample sequencing data and selected reference genome. Table S3. FPKM values and functional annotations of 23 genes i…
View article: Additional file 3 of Identification of genes related to tipburn resistance in Chinese cabbage and preliminary exploration of its molecular mechanism
Additional file 3 of Identification of genes related to tipburn resistance in Chinese cabbage and preliminary exploration of its molecular mechanism Open
Additional file 3.
View article: Additional file 2 of Identification of genes related to tipburn resistance in Chinese cabbage and preliminary exploration of its molecular mechanism
Additional file 2 of Identification of genes related to tipburn resistance in Chinese cabbage and preliminary exploration of its molecular mechanism Open
Additional file 2: Figure S1. Principal component analysis of all genes in tipburn sensitive samples and tipburn resistant samples. Figure S2. FPKM and qRT-PCR values of 21 tipburn related protein genes.
View article: Genome-wide Characterization and Expression Analysis of YABBY&nbsp;Gene Family in Three Cultivars of Cucurbita Linn. And Their Response of Salt Stress in Cucurbita Moschata
Genome-wide Characterization and Expression Analysis of YABBY Gene Family in Three Cultivars of Cucurbita Linn. And Their Response of Salt Stress in Cucurbita Moschata Open
BackgroundPlant specific YABBY transcription factors have important biological roles in plant growth and abiotic stress. However, the identification of Cucurbita Linn. YABBY and their response to salt stress have not yet been reported. The…
View article: Transcriptome Analysis of Pyrus betulaefolia Seedling Root Responses to Short-Term Potassium Deficiency
Transcriptome Analysis of Pyrus betulaefolia Seedling Root Responses to Short-Term Potassium Deficiency Open
Potassium (K) plays a crucial role in multiple physiological and developmental processes in plants. Its deficiency is a common abiotic stress that inhibits plant growth and reduces crop productivity. A better understanding of the mechanism…
View article: Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata)
Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata) Open
Background: Crop quality and yield are affected by abiotic and biotic stresses, and heat shock transcription factors ( Hsfs ) are considered to play important roles in regulating plant tolerance under various stresses. To investigate the r…
View article: Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata)
Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata) Open
Background: Crop quality and yield are affected by abiotic and biotic stresses, and heat shock transcription factors ( Hsfs ) are considered to play important roles in regulating plant tolerance under various stresses. To investigate the r…
View article: Genome-wide characterization and expression analysis&nbsp;of the heat shock transcription factor family&nbsp;in pumpkin&nbsp;(Cucurbita moschata)
Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata) Open
Background: Crop quality and yield are affected by abiotic and biotic stresses, and heat shock transcription factors ( Hsfs ) are considered to play important roles in regulating plant tolerance under various stresses. To investigate the r…
View article: Genome-wide characterization and expression analysis&nbsp;of the heat shock transcription factor family&nbsp;in pumpkin&nbsp;(Cucurbita moschata)
Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata) Open
Background: Crop quality and yield are affected by abiotic and biotic stresses, and heat shock transcription factors ( Hsfs ) are considered to play important roles in regulating plant tolerance under various stresses. To investigate the r…
View article: Evolutionary Expansion and Expression Analysis of the Oligopeptide Transporter Gene Family Between Cucurbita Moschata and Cucurbita Maxima
Evolutionary Expansion and Expression Analysis of the Oligopeptide Transporter Gene Family Between Cucurbita Moschata and Cucurbita Maxima Open
Background: Pumpkin is an important non-saline economic vegetable, salt stress often restricts the growth of pumpkin roots and the transportation and balance of mineral ions in the body. Oligopeptide transporter (OPT) plays an important ro…
View article: Alcohol dehydrogenase (ADH) genes family in wheat (Triticum aestivum): Genome-wide identification, characterization, phylogenetic relationship and expression patterns
Alcohol dehydrogenase (ADH) genes family in wheat (Triticum aestivum): Genome-wide identification, characterization, phylogenetic relationship and expression patterns Open
Background Alcohol dehydrogenase (ADH) plays important roles in plant survival under anaerobic conditions. Although some research has been carried out the functions of ADH in other plants, that of wheat TaADH family genes in response to ab…
View article: Genome-wide Characterization and Functional Analysis of the Heat Shock Transcription Factor Family in Pumpkin
Genome-wide Characterization and Functional Analysis of the Heat Shock Transcription Factor Family in Pumpkin Open
Background: Crop quality and yield are affected by abiotic and biotic stresses, and heat shock transcription factors ( Hsfs ) are considered to play important roles in regulating plant tolerance under various stresses. To investigate the r…
View article: Transcriptomic and anatomic profiling reveal germination process of different wheat varieties in response to waterlogging stress
Transcriptomic and anatomic profiling reveal germination process of different wheat varieties in response to waterlogging stress Open
Background Waterlogging is one of the most serious abiotic stresses affecting wheat-growing regions in China. There are considerable differences in waterlogging tolerance among different wheat varieties, and the mechanisms governing the wa…
View article: Additional file 1 of Transcriptomic and anatomic profiling reveal the germination process of different wheat varieties in response to waterlogging stress
Additional file 1 of Transcriptomic and anatomic profiling reveal the germination process of different wheat varieties in response to waterlogging stress Open
Additional file 1: Table S1. Summary of the RNA-Seq data collected from the seeds of three wheat varieties (ZM22, BN207 and BN607) under the waterlogging and control treatments.
View article: Additional file 1 of Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata)
Additional file 1 of Genome-wide characterization and expression analysis of the heat shock transcription factor family in pumpkin (Cucurbita moschata) Open
Additional file 1: Table S1. The data of expression levels of 36 CmHsf genes in root, stem, cotyledon and true leaves. The results were calculated via the 2−ΔΔCt method. Table S2. Statistics for the number of cis-acting elements in the 36 …