Chenliang Yu
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View article: Analysis genome of Pseudotaxus chienii reveals insights into the origin and evolution of taxane biosynthesis
Analysis genome of Pseudotaxus chienii reveals insights into the origin and evolution of taxane biosynthesis Open
View article: Integrated metabolomics and transcriptomics reveal the role of calcium sugar alcohol in the regulation of phenolic acid biosynthesis in Torreya grandis nuts
Integrated metabolomics and transcriptomics reveal the role of calcium sugar alcohol in the regulation of phenolic acid biosynthesis in Torreya grandis nuts Open
Our results indicated that a new regulatory module, Ca2+-AP2-HCT, involved in the regulation of phenolic acid biosynthesis was revealed, expanding the understanding of the role of Ca2+ fertilizers in plant secondary m…
View article: Metabolic and transcriptomic responses of <i>Taxus mairei</i> to nano-pollutants: insights into AgNPs and PsNPs impact
Metabolic and transcriptomic responses of <i>Taxus mairei</i> to nano-pollutants: insights into AgNPs and PsNPs impact Open
There is a growing global concern regarding the pervasive issue of nano-pollutants. Typical nano-materials, such as polystyrene nanoplastics (PsNPs) and silver nanoparticles (AgNPs), pose significant risks to ecosystems and human health. T…
View article: Soil Microbial and Metabolomic Shifts Induced by Phosphate-Solubilizing Bacterial Inoculation in Torreya grandis Seedlings
Soil Microbial and Metabolomic Shifts Induced by Phosphate-Solubilizing Bacterial Inoculation in Torreya grandis Seedlings Open
Phosphorus is crucial for plant growth and development, but excess fertilizer not absorbed by plants often binds with metal ions like iron and manganese, forming insoluble compounds that contribute to soil environmental pollution. This stu…
View article: Effects of calcium phosphate and phosphorus-dissolving bacteria on microbial structure and function during Torreya Grandis branch waste composting
Effects of calcium phosphate and phosphorus-dissolving bacteria on microbial structure and function during Torreya Grandis branch waste composting Open
Both Burkholderia inoculation and calcium phosphate treatment affected the phosphorus composition, nitrogen content and metabolites of T. grandis branch and leaf waste compost.These results extend our comprehension of the coupling of matte…
View article: Genome-wide Identification of Torreya grandis AMT Family Genes Revealed the Function and Regulation of the Nitrogen Stress Responsive Gene TgAMT5
Genome-wide Identification of Torreya grandis AMT Family Genes Revealed the Function and Regulation of the Nitrogen Stress Responsive Gene TgAMT5 Open
Background Ammonium transporters (AMTs) are a class of transmembrane proteins widely found in plants, bacteria, fungi, and other organisms, mediating transmembrane ammonium nitrogen (NH4+) transport, which is one of t…
View article: Effects of calcium phosphate and phosphorus-dissolving bacteria on microbial structure and function during Torreya grandis branch waste composting
Effects of calcium phosphate and phosphorus-dissolving bacteria on microbial structure and function during Torreya grandis branch waste composting Open
Background To investigate the effects of phosphorus solubilizing microorganisms and calcium phosphate on the composting of Torreya grandis branches and leaves, as well as to explain the nutritional and metabolic markers related to the comp…
View article: Integrated metabolomics and transcriptomics reveal the role of calcium sugar alcohol in the regulation of phenolic acid biosynthesis in Torreya grandis nuts
Integrated metabolomics and transcriptomics reveal the role of calcium sugar alcohol in the regulation of phenolic acid biosynthesis in Torreya grandis nuts Open
Background：Torreya grandis, a prominent tree species of the autochthonous subtropical region of China, possesses a drupe-like fruit containing a nut that is rich in nutrients and bioactive compounds. However, the effect of calcium (Ca…
View article: Effects of Strigolactone on Torreya grandis Gene Expression and Soil Microbial Community Structure Under Simulated Nitrogen Deposition
Effects of Strigolactone on Torreya grandis Gene Expression and Soil Microbial Community Structure Under Simulated Nitrogen Deposition Open
Nitrogen enters the terrestrial ecosystem through deposition. High nitrogen levels can affect physical and chemical properties of soil and inhibit normal growth and reproduction of forest plants. Nitrogen modulates the composition of soil …
View article: Unraveling the malate biosynthesis during development of Torreya grandis nuts
Unraveling the malate biosynthesis during development of Torreya grandis nuts Open
View article: Comparative de novo transcriptomics and untargeted metabolomic analyses elucidate complicated mechanisms regulating celery (Apium graveolens L.) responses to selenium stimuli
Comparative de novo transcriptomics and untargeted metabolomic analyses elucidate complicated mechanisms regulating celery (Apium graveolens L.) responses to selenium stimuli Open
Presently, concern regarding the effects of selenium (Se) on the environment and organisms worldwide is increasing. Too much Se in the soil is harmful to plants. In this study, Illumina RNA sequencing and the untargeted metabolome of contr…
View article: Peer Review #2 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.2)"
Peer Review #2 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.2)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Peer Review #2 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.1)"
Peer Review #2 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.1)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Peer Review #3 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.2)"
Peer Review #3 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.2)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Peer Review #1 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.1)"
Peer Review #1 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.1)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Comparative proteomic analysis of pepper ( <i>Capsicum annuum</i> L.) seedlings under selenium stress
Comparative proteomic analysis of pepper ( <i>Capsicum annuum</i> L.) seedlings under selenium stress Open
Selenium (Se) is an essential trace element for human and animal health. Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals. To address the challenge of Se poisoning in plants,…
View article: Peer Review #3 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.1)"
Peer Review #3 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.1)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Peer Review #1 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.2)"
Peer Review #1 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.2)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Peer Review #3 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.3)"
Peer Review #3 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.3)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Peer Review #2 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.3)"
Peer Review #2 of "Comparative proteomic analysis of pepper (Capsicum annuum L.) seedlings under selenium stress (v0.3)" Open
Selenium (Se) is an essential trace element for human and animal health.Se fertilizer has been used to increase the Se content in crops to meet the Se requirements in humans and animals.To address the challenge of Se poisoning in plants, t…
View article: Hyperspectral imaging combined with machine learning as a tool to obtain high‐throughput plant salt‐stress phenotyping
Hyperspectral imaging combined with machine learning as a tool to obtain high‐throughput plant salt‐stress phenotyping Open
Summary The rapid selection of salinity‐tolerant crops to increase food production in salinized lands is important for sustainable agriculture. Recently, high‐throughput plant phenotyping technologies have been adopted that use plant morph…
View article: Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
View article: The Phosphoproteomic Response of Okra (Abelmoschus esculentus L.) Seedlings to Salt Stress
The Phosphoproteomic Response of Okra (Abelmoschus esculentus L.) Seedlings to Salt Stress Open
Soil salinization is a major environmental stresses that seriously threatens land use efficiency and crop yields worldwide. Although the overall response of plants to NaCl has been well studied, the contribution of protein phosphorylation …
View article: Additional file 10: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Additional file 10: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
Table S5. Node Information of PPI. (XLSX 26â kb)
View article: Additional file 3: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Additional file 3: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
Table S2. The detail information of identified peptides pertinent to detected proteins. (XLSX 5698â kb)
View article: Additional file 1: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Additional file 1: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
Table S1. The primer sequences for qRT-PCR. (XLSX 10â kb)
View article: Additional file 4: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Additional file 4: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
Table S3. The detail information of all identified peptides. (XLSX 1618â kb)
View article: Additional file 11: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Additional file 11: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
Table S6. Network Information of PPI. (XLSX 23â kb)
View article: Additional file 5: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress
Additional file 5: of Comparative proteomic analysis of okra (Abelmoschus esculentus L.) seedlings under salt stress Open
Table S4. The detail information of DEPs. (XLSX 91â kb)
View article: Correction: Transcriptome analysis of tomato (Solanum lycopersicum L.) shoots reveals a crosstalk between auxin and strigolactone
Correction: Transcriptome analysis of tomato (Solanum lycopersicum L.) shoots reveals a crosstalk between auxin and strigolactone Open
[This corrects the article DOI: 10.1371/journal.pone.0201124.].