Chuangye Yang
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View article: A review of genomics application in aquaculture: status, challenges, and priorities for future direction
A review of genomics application in aquaculture: status, challenges, and priorities for future direction Open
Aquaculture has witnessed excellent growth in recent decades, with significant potential for protein nutrition security and jobs. Genomics has significantly enhanced aquaculture technologies across various species and culture processes, im…
View article: Oyster farming helps reducing China's greenhouse gas emissions for food production
Oyster farming helps reducing China's greenhouse gas emissions for food production Open
Bivalve farming represents an economically and ecologically beneficial approach to addressing the escalating global food demand. Notably, oysters, which constitute a substantial proportion of cultivated bivalves, exceeding 40 %, demonstrat…
View article: The Combined Effects of Cadmium and Microplastic Mixtures on the Digestion, Energy Metabolism, Oxidative Stress Regulation, Immune Function, and Metabolomes in the Pearl Oyster (Pinctada fucata martensii)
The Combined Effects of Cadmium and Microplastic Mixtures on the Digestion, Energy Metabolism, Oxidative Stress Regulation, Immune Function, and Metabolomes in the Pearl Oyster (Pinctada fucata martensii) Open
The accumulation of cadmium (Cd) and microplastics (MPs) can have major deleterious effects on the health of marine ecosystems and organisms, including the pearl oyster Pinctada fucata martensii. Here, we characterized the effects of Cd an…
View article: The immunomodulatory effects of L-carnitine on the immune responses induced by LPS and transplantation in the pearl oyster Pinctada fucata martensii
The immunomodulatory effects of L-carnitine on the immune responses induced by LPS and transplantation in the pearl oyster Pinctada fucata martensii Open
L-carnitine (LC) is a natural antioxidant that plays an important role in improving the antioxidant capacity of organisms and regulating the immune response. The aim of this study was to clarify the effect of LC on immune regulation in Pin…
View article: LncMPEG1/miR-2c regulates exoskeleton biocalcification via engrailed in bivalve
LncMPEG1/miR-2c regulates exoskeleton biocalcification via engrailed in bivalve Open
LncRNAs and miRNAs has been reported to play important regulation roles in skeleton growth. This research elucidates the molecular interplay between long noncoding RNA LncMPEG1 and miRNA miR-2c in the biocalcification process of shell form…
View article: Immunomodulatory Effects of Choline in Pearl Oyster Pinctada Fucata Martensii
Immunomodulatory Effects of Choline in Pearl Oyster Pinctada Fucata Martensii Open
View article: Titanium Dioxide Nanoparticles Negatively Influence Gill Metabolism in Pinctada fucata martensii
Titanium Dioxide Nanoparticles Negatively Influence Gill Metabolism in Pinctada fucata martensii Open
Background: In recent years, titanium dioxide (TiO2) nanoparticles (NPs) have been widely used in various industries due to their favorable chemical properties, and their contamination of the environment has attracted much attention, espec…
View article: Transcriptome analysis provides novel insights into the factors influencing the settlement and metamorphosis of Pinctada maxima
Transcriptome analysis provides novel insights into the factors influencing the settlement and metamorphosis of Pinctada maxima Open
The metamorphosis of the planktonic larvae of bivalve species plays a key role in their complex life history strategies, and this process involves changes in the molecular machinery required for sessile life and the development of intricat…
View article: Metabolic Response in the Gill Tissue of Juvenile Black-Shelled Pearl Oyster (Pinctada fucata martensii) under Salinity Stress
Metabolic Response in the Gill Tissue of Juvenile Black-Shelled Pearl Oyster (Pinctada fucata martensii) under Salinity Stress Open
Salinity significantly affects shellfish metabolism and growth. In this study, we evaluated the characterization of metabolomic differences in the juvenile black-shelled pearl oyster, Pinctada fucata martensii, under 15‰ (LSG), 25‰ (CG), a…
View article: Transcriptomic analyses of Pinctada fucata martensii responses under stress of titanium dioxide nanoparticles
Transcriptomic analyses of Pinctada fucata martensii responses under stress of titanium dioxide nanoparticles Open
Titanium dioxide nanoparticles (TiO 2 -NPs) released into the environment is becoming more prevalent due to their increased usage, marine TiO 2 -NPs contamination is escalating concerns in coastal areas. To understand the potential impact …
View article: Editorial: Population and action mechanism of immune cells in fish
Editorial: Population and action mechanism of immune cells in fish Open
Citation: Zhou Z, Huang Y, Hao R, Yang C, Abarike ED and Li J (2024) Editorial: Population and action mechanism of immune cells in fish. Front. Immunol. 15:1425155. doi: 10.3389/fimmu.2024.1425155
View article: Circulating exosome miRNAs, is it the connection cargo for cell communication and cross-kingdom communication by food chain in bivalves?
Circulating exosome miRNAs, is it the connection cargo for cell communication and cross-kingdom communication by food chain in bivalves? Open
MicroRNAs (miRNAs) can efficiently regulate gene expression at intracellular and extracellular levels. Plant/food-derived miRNAs of the bio-environment are highly enriched in human serum or serum from phytophagous animals and play roles in…
View article: Chemical compositions and gene expression pattern of five colored phenotypes of pearl oyster Pinctada margaritifera
Chemical compositions and gene expression pattern of five colored phenotypes of pearl oyster Pinctada margaritifera Open
：: Pearl oyster Pinctada margaritifera is famous for culturing the high-valued round nucleated pearl with prismatic and nacre layer color polymorphism. However, there exists limiting understanding in prismatic and nacre color formation in …
View article: Transcriptome Analysis Provides Novel Insights into the Factors Affecting the Settlement and Metamorphosis of Pinctada Maxima
Transcriptome Analysis Provides Novel Insights into the Factors Affecting the Settlement and Metamorphosis of Pinctada Maxima Open
View article: Integrated Analysis of Oxidative Stress, Neurotransmitter Dynamics, Enzymatic Activity, and Metabolomics in Pearl Oyster Pinctada Fucata Martensii Exposed to Pvc Nanoplastics and Hyposalinity
Integrated Analysis of Oxidative Stress, Neurotransmitter Dynamics, Enzymatic Activity, and Metabolomics in Pearl Oyster Pinctada Fucata Martensii Exposed to Pvc Nanoplastics and Hyposalinity Open
View article: Effects of temperature, salinity, and light on the growth performance, survival, final biomass, and digestive enzyme activities of juvenile Sipunculus nudus
Effects of temperature, salinity, and light on the growth performance, survival, final biomass, and digestive enzyme activities of juvenile Sipunculus nudus Open
Enhancing the culture technology of Sipunculus nudus by improving the environmental conditions is a crucial means to address its scarcity. This study aimed to evaluate the effects of different environmental factors on the growth performanc…
View article: The first high-quality chromosome-level genome of the Sipuncula Sipunculus nudus using HiFi and Hi-C data
The first high-quality chromosome-level genome of the Sipuncula Sipunculus nudus using HiFi and Hi-C data Open
Sipuncula is a class of exocoelomic unsegmented animals whose evolutionary relationships are unresolved. The peanut worm Sipunculus nudus is a globally distributed, economically important species belonging to the class Sipuncula. Herein, w…
View article: Insights into the bacterial community compositions of peanut worm (Sipunculus nudus) and their association with the surrounding environment
Insights into the bacterial community compositions of peanut worm (Sipunculus nudus) and their association with the surrounding environment Open
The peanut worm ( Sipunculus nudus ) is an important economic and ecological fishery resource in China. To determine how S. nudus interacts with its culture environment, in this study, the diversity, composition, and interrelationships of …
View article: Lipidomic insights into the immune response and pearl formation in transplanted pearl oyster Pinctada fucata martensii
Lipidomic insights into the immune response and pearl formation in transplanted pearl oyster Pinctada fucata martensii Open
During pearl culture, the excess immune responses may induce nucleus rejection and death of pearl oysters after transplantation. To better understand the immune response and pearl formation, lipidomic analysis was applied to investigate ch…
View article: Long non-coding RNA LncMPEG1 responds to multiple environmental stressors by affecting biomineralization in pearl oyster Pinctada fucata martensii
Long non-coding RNA LncMPEG1 responds to multiple environmental stressors by affecting biomineralization in pearl oyster Pinctada fucata martensii Open
Marine environmental change directly affects bivalve growth and survival. Exoskeleton formation, the main energy dissipation in the physiological metabolism, typically reflects the body growth of the bivalve. However, how bivalves regulate…
View article: Molecular cloning, characterization, and expression of two 5-HTRs from the pearl oyster Pinctada fucata martensii
Molecular cloning, characterization, and expression of two 5-HTRs from the pearl oyster Pinctada fucata martensii Open
The receptors of serotonin, also known as 5-hydroxytryptamine receptor (5-HTR) can mediate regulatory metamorphosis processes in a variety of mollusks. Studying the mechanisms of metamorphosis of the pearl oyster is significant to elucidat…
View article: Effects of hypoxic stress on the digestion, energy metabolism, oxidative stress regulation, and immune function of the pearl oyster (Pinctada fucata martensii)
Effects of hypoxic stress on the digestion, energy metabolism, oxidative stress regulation, and immune function of the pearl oyster (Pinctada fucata martensii) Open
View article: Editorial: Omics Approaches in Aquatic Nutritional Physiology
Editorial: Omics Approaches in Aquatic Nutritional Physiology Open
EDITORIAL article Front. Physiol., 03 March 2022 | https://doi.org/10.3389/fphys.2022.870482
View article: Cloning and functional characterization of PmΔ5FAD in pearl oyster Pinctada fucata martensii
Cloning and functional characterization of PmΔ5FAD in pearl oyster Pinctada fucata martensii Open
View article: Dietary Carbohydrate and Protein Levels Affect the Growth Performance of Juvenile Peanut Worm (Sipunculus nudus): An LC–MS-Based Metabolomics Study
Dietary Carbohydrate and Protein Levels Affect the Growth Performance of Juvenile Peanut Worm (Sipunculus nudus): An LC–MS-Based Metabolomics Study Open
The peanut worm ( Sipunculus nudus ) is an economically important fishery resource in China. To determine how dietary carbohydrate and protein levels affect the growth performance of juvenile S. nudus and identify the mechanisms underlying…
View article: Microbiota Diversity in Pearl Oyster Pinctada fucata martensii Intestine and Its Aquaculture Environment
Microbiota Diversity in Pearl Oyster Pinctada fucata martensii Intestine and Its Aquaculture Environment Open
Environmental microbiota plays a vital role in the intestinal microbiota of aquatic organisms. However, data concerning the association between the intestinal microbiota of pearl oyster Pinctada fucata martensii and the surrounding seawate…
View article: Integrated GC–MS- and LC–MS-Based Untargeted Metabolomics Studies of the Effect of Vitamin D3 on Pearl Production Traits in Pearl Oyster Pinctada fucata martensii
Integrated GC–MS- and LC–MS-Based Untargeted Metabolomics Studies of the Effect of Vitamin D3 on Pearl Production Traits in Pearl Oyster Pinctada fucata martensii Open
Pearl oyster Pinctada fucata martensii is widely recognized for biomineralization and has been cultured for high-quality marine pearl production. To ascertain how dietary vitamin D3 (VD3) levels affect the features of pearl production by P…
View article: Molecular Cloning and Polymorphism Analysis of PmFGF18 from Pinctada fucata martensii
Molecular Cloning and Polymorphism Analysis of PmFGF18 from Pinctada fucata martensii Open
Fibroblast growth factor 18 (FGF18) plays an important functional role in skeletal growth and development. The FGF18 gene was characterized in pearl oyster Pinctada fucata martensii (PmFGF18) with the full-length sequence containing an ope…
View article: Transcriptomic analysis of differentially expressed genes in the larval settlement and metamorphosis of peanut worm Sipunculus nudus
Transcriptomic analysis of differentially expressed genes in the larval settlement and metamorphosis of peanut worm Sipunculus nudus Open
View article: Characterization of metabolomic differences in peanut worm Sipunculus nudus between breeding and nonbreeding seasons
Characterization of metabolomic differences in peanut worm Sipunculus nudus between breeding and nonbreeding seasons Open
Peanut worm, Sipunculus nudus, is an important economic and ecological species. This study aims to characterize differences in the coelomic fluid of S. nudus between breeding and nonbreeding seasons. Animals were obtained in July and Novem…