Chuck McCallum
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View article: Vitessce: integrative visualization of multimodal and spatially resolved single-cell data
Vitessce: integrative visualization of multimodal and spatially resolved single-cell data Open
Multiomics technologies with single-cell and spatial resolution make it possible to measure thousands of features across millions of cells. However, visual analysis of high-dimensional transcriptomic, proteomic, genome-mapped and imaging d…
View article: Vitessce: integrative visualization of multimodal and spatially-resolved single-cell data
Vitessce: integrative visualization of multimodal and spatially-resolved single-cell data Open
Multi-omics technologies with single-cell and spatial resolution make it possible to measure thousands of features across millions of cells. However, visual analysis of high-dimensional transcriptomic, proteomic, genome-mapped, and imaging…
View article: Viv: Multiscale Visualization of High-Resolution Multiplexed Bioimaging Data on the Web
Viv: Multiscale Visualization of High-Resolution Multiplexed Bioimaging Data on the Web Open
Recent advances in highly multiplexed imaging have enabled the comprehensive profiling of complex tissues in healthy and diseased states, facilitating the study of fundamental biology and human disease in spatially-resolved contexts at sub…
View article: hms-dbmi/higlass v1.5.2
hms-dbmi/higlass v1.5.2 Open
Fast large scale matrix visualization for the web.
View article: HiGlass: web-based visual exploration and analysis of genome interaction maps
HiGlass: web-based visual exploration and analysis of genome interaction maps Open
We present HiGlass, an open source visualization tool built on web technologies that provides a rich interface for rapid, multiplex, and multiscale navigation of 2D genomic maps alongside 1D genomic tracks, allowing users to combine variou…