Chunchao Wang
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View article: Elucidating the Epigenetic Landscape of Type 2 Diabetes Mellitus: A Multi-Omics Analysis Revealing Novel CpG Sites and Their Association with Cardiometabolic Traits
Elucidating the Epigenetic Landscape of Type 2 Diabetes Mellitus: A Multi-Omics Analysis Revealing Novel CpG Sites and Their Association with Cardiometabolic Traits Open
Our study identifies novel genetically regulated CpG sites associated with T2DM risk and highlights OASL as a potential epigenetic regulator of glucose metabolism in α-cells. These findings provide mechanistic insights into the epigenetic …
View article: Sowing the Seeds of Disparity: Historical Cereal Suitability and Contemporary Female Entrepreneurship in China
Sowing the Seeds of Disparity: Historical Cereal Suitability and Contemporary Female Entrepreneurship in China Open
View article: Changes in transcriptomes during grain filling in barley with a focus on thickness and number of aleurone cell layers
Changes in transcriptomes during grain filling in barley with a focus on thickness and number of aleurone cell layers Open
Background The aleurone layer of endosperm consists of live cells rich in nutrients. Barley is the only cereal which commonly has two or three layers of aleurone cells. Currently little is known about the genetic mechanism and regulatory p…
View article: Elucidating the Epigenetic Landscape of Type 2 Diabetes: A Multi-Omics Analysis Revealing Novel CpG Sites and Their Association with Cardiometabolic Traits
Elucidating the Epigenetic Landscape of Type 2 Diabetes: A Multi-Omics Analysis Revealing Novel CpG Sites and Their Association with Cardiometabolic Traits Open
Type 2 Diabetes (T2D) is a complex, multifactorial disease with a significant global health burden. Genome-Wide Association Studies (GWAS) have identified numerous genetic variants associated with T2D, yet understanding their functional me…
View article: A complete assembly of the sorghum BTx623 reference genome
A complete assembly of the sorghum BTx623 reference genome Open
View article: A complete reference genome assembly for foxtail millet and Setaria-db, a comprehensive database for Setaria
A complete reference genome assembly for foxtail millet and Setaria-db, a comprehensive database for Setaria Open
View article: Evolution of bonding mechanism and fracture mechanism of Ti alloy-steel joint by dual-beam laser welding using Mg-RE (RE=Gd, Y) filler
Evolution of bonding mechanism and fracture mechanism of Ti alloy-steel joint by dual-beam laser welding using Mg-RE (RE=Gd, Y) filler Open
In this paper, a novel coaxial continuous-pulsed dual-beam laser was proposed to join TC4 titanium alloy with QP980 high-strength steel, and magnesium alloy containing rare-earth elements (Mg-RE) was creatively as filler. The weld appearan…
View article: CoreSNP: an efficient pipeline for core marker profile selection from genome-wide SNP datasets in crops
CoreSNP: an efficient pipeline for core marker profile selection from genome-wide SNP datasets in crops Open
Background DNA marker profiles play a crucial role in the identification and registration of germplasm, as well as in the distinctness, uniformity, and stability (DUS) testing of new plant variety protection. However, selecting minimal mar…
View article: Natural variations of HvSRN1 modulate the spike rachis node number in barley
Natural variations of HvSRN1 modulate the spike rachis node number in barley Open
Grain number, one of the major determinants of yield in Triticeae crops, is largely determined by spikelet number and spike rachis node number (SRN). Here, we identified three quantitative trait loci (QTLs) for SRN using 145 recombinant in…
View article: Genome-Wide Association Study Identifies Resistance Loci for Bacterial Blight in a Collection of Asian Temperate Japonica Rice Germplasm
Genome-Wide Association Study Identifies Resistance Loci for Bacterial Blight in a Collection of Asian Temperate Japonica Rice Germplasm Open
Growing resistant rice cultivars is the most effective strategy to control bacterial blight (BB), a devastating disease caused by Xanthomonas oryzae pv. oryzae (Xoo). Screening resistant germplasm and identifying resistance (R) genes are p…
View article: Genome diversity and highland-adaptative variation in Tibet barley landrace population of China
Genome diversity and highland-adaptative variation in Tibet barley landrace population of China Open
Barley landraces accumulated variation in adapting to extreme highland environments during long-term domestication in Tibet, but little is known about their population structure and genomic selection traces. In this study, tGBS (tunable ge…
View article: Evolution of Bonding Mechanism and Fracture Mechanism of Ti Alloy-Steel Joint by Dual-Beam Laser Welding Using Mg-Re (Re=Gd, Y) Filler
Evolution of Bonding Mechanism and Fracture Mechanism of Ti Alloy-Steel Joint by Dual-Beam Laser Welding Using Mg-Re (Re=Gd, Y) Filler Open
View article: Positional cloning identified HvTUBULIN8 as the candidate gene for round lateral spikelet (RLS) in barley (Hordeum vulgare L.)
Positional cloning identified HvTUBULIN8 as the candidate gene for round lateral spikelet (RLS) in barley (Hordeum vulgare L.) Open
Key message Map-based cloning, subcellular localization, virus-induced-gene-silencing and transcriptomic analysis reveal HvTUB8 as a candidate gene with pleiotropic effects on barley spike and leaf development via ethylene and chlorophyll …
View article: Six Underutilized Grain Crops for Food and Nutrition in China
Six Underutilized Grain Crops for Food and Nutrition in China Open
Underutilized grain crops are an essential part of the food system that supports humankind. A number of these crops can be found in China, such as barley, buckwheat, broomcorn millet, foxtail millet, oat, and sorghum, which have characteri…
View article: Barley (Hordeum vulgare L.) β-Tubulin gene HvTUBULIN8 has pleiotropic effects on spike and leaf development
Barley (Hordeum vulgare L.) β-Tubulin gene HvTUBULIN8 has pleiotropic effects on spike and leaf development Open
Barley lateral spikelet morphology and grain shape play a key role in grain physical quality and yield. Several genes and QTLs for these traits have been cloned or fine mapped previously. Here, we report the phenotypic and genotypic analys…
View article: SoyFGB v2.0: a unique access to variations of Chinese Soybean Gene Bank (CNSGB) germplasm
SoyFGB v2.0: a unique access to variations of Chinese Soybean Gene Bank (CNSGB) germplasm Open
Summary In Chinese National Soybean GeneBank (CNSGB), we have collected more than 30,000 soybean accessions. However, data sharing for soybean remains an especially ‘sensitive’ question, and how to share the genome variations within rule f…
View article: Stress-Activated Protein Kinase OsSAPK7 Regulates Salt- Stress Tolerance by Modulating Diverse Stress-Defensive Responses in Rice
Stress-Activated Protein Kinase OsSAPK7 Regulates Salt- Stress Tolerance by Modulating Diverse Stress-Defensive Responses in Rice Open
View article: Identification and allele mining of new candidate genes underlying rice grain weight and grain shape by genome-wide association study
Identification and allele mining of new candidate genes underlying rice grain weight and grain shape by genome-wide association study Open
View article: Identification of quantitative trait loci associated with resistance to Xanthomonas oryzae pv. oryzae pathotypes prevalent in South China
Identification of quantitative trait loci associated with resistance to Xanthomonas oryzae pv. oryzae pathotypes prevalent in South China Open
Bacterial blight (BB), which is caused by Xanthomonas oryzae pv. oryzae (Xoo), is an important rice disease responsible for significant yield losses. In the rice-growing regions of South China where BB outbreaks are common, the resistance …
View article: Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project
Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project Open
View article: The landscape of gene–CDS–haplotype diversity in rice: Properties, population organization, footprints of domestication and breeding, and implications for genetic improvement
The landscape of gene–CDS–haplotype diversity in rice: Properties, population organization, footprints of domestication and breeding, and implications for genetic improvement Open
View article: Additional file 2 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project
Additional file 2 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project Open
Additional file 2: Table S2. Information about the diverse rice panel of 340 accessions used in this study.
View article: Additional file 1 of Identification and allele mining of new candidate genes underlying rice grain weight and grain shape by genome-wide association study
Additional file 1 of Identification and allele mining of new candidate genes underlying rice grain weight and grain shape by genome-wide association study Open
Additional file 1: Table S1. Summary of 2,453 rice accessions used in our study. Table S2. Analysis of the variance in traits related to grain weight and grain shape. Table S3. Performance of grain weight and grain shape in different subgr…
View article: Additional file 3 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project
Additional file 3 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project Open
Additional file 3: Table S3. Annotation of significant SNPs for bacterial blight resistance in a diverse panel of 340 accessions
View article: Additional file 1 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project
Additional file 1 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project Open
Additional file 1: Table S1. Primers used in this study
View article: Additional file 4 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project
Additional file 4 of Genome-Wide Association Study Dissects Resistance Loci against Bacterial Blight in a Diverse Rice Panel from the 3000 Rice Genomes Project Open
Additional file 4: Table S4. Haplotypes of one candidate gene of xa44(t), Os11g0690066
View article: The barley pan-genome reveals the hidden legacy of mutation breeding
The barley pan-genome reveals the hidden legacy of mutation breeding Open
View article: Comparative microRNA profiling reveals microRNAs involved in rice resistant response to bacterial blight
Comparative microRNA profiling reveals microRNAs involved in rice resistant response to bacterial blight Open
View article: Transcriptome and metabolome profiling of unheading in F1 hybrid rice
Transcriptome and metabolome profiling of unheading in F1 hybrid rice Open
View article: Systematic Analysis of Differential H3K27me3 and H3K4me3 Deposition in Callus and Seedling Reveals the Epigenetic Regulatory Mechanisms Involved in Callus Formation in Rice
Systematic Analysis of Differential H3K27me3 and H3K4me3 Deposition in Callus and Seedling Reveals the Epigenetic Regulatory Mechanisms Involved in Callus Formation in Rice Open
Plant growth and development occurs through meristematic cell activity, and cell fate transition is accompanied by epigenetic modifications. Callus with cell pluripotency exhibits the ability to undergo continued cell division, and is idea…