Explanipedia

P727: Extracting HMW DNA from saliva for HiFi sequencing applications Open

D Moine, Sarah B. Kingan, Nina Gonzaludo, Shreyasee Chakraborty, Heather Ferrao , et al. · 2025

The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars Open

Jarkko Salojärvi, Aditi Rambani, Zhe Yu, Romain Guyot, Susan R. Strickler , et al. · 2024

The genome and population genomics of allopolyploidCoffea arabicareveal the diversification history of modern coffee cultivars Open

Jarkko Salojärvi, Aditi Rambani, Zhe Yu, Romain Guyot, Susan R. Strickler , et al. · 2023

Coffea arabica , an allotetraploid hybrid of C. eugenioides and C. canephora , is the source of approximately 60% of coffee products worldwide, and its cultivated accessions have undergone several population bottlenecks. We present chromos…

Host–microbial co-metabolites modulated by human milk oligosaccharides relate to reduced risk of respiratory tract infections Open

François‐Pierre Martin, Hanne L. P. Tytgat, Helle Pedersen, D Moine, Aron C. Eklund , et al. · 2022

Human milk oligosaccharides (HMOs) are structurally diverse oligosaccharides present in breast milk, supporting the development of the gut microbiota and immune system. Previously, 2-HMO (2'fucosyllactose, lacto- N -neotetraose) compared t…

Linking Human Milk Oligosaccharides, Infant Fecal Community Types, and Later Risk To Require Antibiotics Open

Bernard Berger, Nadine Porta, Francis Foata, Dominik Grathwohl, Michèle Delley , et al. · 2020

Human milk is the sole and recommended nutrition for the newborn infant and contains one of the largest constituents of diverse oligosaccharides, dubbed human milk oligosaccharides (HMOs). Preclinical and clinical association studies indic…

Correction for Sakwinska et al., “Nasopharyngeal Microbiota in Healthy Children and Pneumonia Patients” Open

Olga Sakwińska, Viktoria Bastic Schmid, Bernard Berger, Anne Bruttin, Kristina Keitel , et al. · 2019

Volume 52, no. 5, p. 1590–1594, 2014, [https://doi.org/10.1128/JCM.03280-13][1]. Page 1591: The following paragraph should appear at the end of the Materials and Methods section. Nucleotide sequence accession number. Raw 454 sequencing da…

Whole genome sequencing used in an industrial context reveals a Salmonella laboratory cross-contamination Open

Katia Rouzeau-Szynalski, Caroline Barretto, Coralie Fournier, D Moine, Johan Gimonet , et al. · 2019

In 2013, during a routine laboratory analysis performed on food samples, one finished product from a European factory was tested positive for Salmonella Hadar. At the same period, one environmental isolate in the same laboratory was seroty…

Structure and Distribution of Centromeric Retrotransposons at Diploid and Allotetraploid Coffea Centromeric and Pericentromeric Regions Open

Renata de Castro Nunes, Simón Orozco-Arias, Dominique Crouzillat, Lukas A. Mueller, Suzy R. Strickler , et al. · 2018

Centromeric regions of plants are generally composed of large array of satellites from a specific lineage of Gypsy LTR-retrotransposons, called Centromeric Retrotransposons. Repeated sequences interact with a specific H3 histone, pl…

Genome Sequence of Lactobacillus fermentum Strain NCC2970 (CNCM I-5068) Open

Caroline Barretto, Catherine Ngom‐Bru, Alienor Genevaz, Coralie Fournier, D Moine , et al. · 2016

Lactobacillus fermentum NCC2970 (CNCM I-5068) is a lactic acid bacterium originating from the Nestle Culture Collection. Here, we disclose its full 1.9-Gb genome sequence comprising one chromosome with no plasmid.

Oral application of E scherichia coli bacteriophage: safety tests in healthy and diarrheal children from B angladesh Open

Shafiqul Alam Sarker, Bernard Berger, Deng Ying, Silas Kieser, Francis Foata , et al. · 2016

Summary A T4‐like coliphage cocktail was given with different oral doses to healthy Bangladeshi children in a placebo‐controlled randomized phase I safety trial. Fecal phage detection was oral dose dependent suggesting passive gut transit …

High fat diet drives obesity regardless the composition of gut microbiota in mice Open

Sylvie Rabot, Mathieu Membrez, Florence Blancher, Bernard Berger, D Moine , et al. · 2016

Microbiota in Breast Milk of Chinese Lactating Mothers Open

Olga Sakwińska, D Moine, Michèle Delley, Séverine Combremont, Enea Rezzonico , et al. · 2016

The microbiota of breast milk from Chinese lactating mothers at different stages of lactation was examined in the framework of a Maternal Infant Nutrition Growth (MING) study investigating the dietary habits and breast milk composition in …

Fully Closed Genome Sequences of Five Type Strains of the Genus Cronobacter and One Cronobacter sakazakii Strain Open

D Moine, Mohamed Kassam, Leen Baert, Yanjie Tang, Caroline Barretto , et al. · 2016

Cronobacter is associated with infant infections and the consumption of reconstituted infant formula. Here we sequenced and closed six genomes of C. condimenti T , C. muytjensii T , C. universalis T , C. malonaticus T , C. dublinensis T , …

Oral Phage Therapy of Acute Bacterial Diarrhea With Two Coliphage Preparations: A Randomized Trial in Children From Bangladesh Open

Shafiqul Alam Sarker, Shamima Sultana, Gloria Reuteler, D Moine, Patrick Descombes , et al. · 2016

Le tétradrachme d’Ascalon : icône de la numismatique, témoin du règne de Cléopâtre VII et de sa propagande Open

D Moine · 2015

Towards a better understanding of the Coffea Arabica genome structure. Open

Lukas A. Mueller, Susan R. Strickler, Douglas Silva Domingues, Luiz Filipe Protásio Pereira, Alan A. Andrade , et al. · 2015

An international consortium was initiated in 2012 with the goal to perform the sequencing of the Coffea arabica genome. This consortium includes 34 researchers, engineers and technicians coming from 13 institutions in six different countri…

Dihaploid Coffea arabica genome sequencing and assembly [W180] Open

Alexandre de Kochko, Dominique Crouzillat, Michel Rigoreau, Maud Lepelley, Laurence Bellanger , et al. · 2015

Coffea arabica which accounts for 70% of world coffee production is an allotetraploid with a genome size of approximately 1.3 Gb and is derived from the hybridization of C. canephora (710 Mb) and C. eugenioides (670 Mb). To elucidate the e…

Le tétradrachme d'Ascalon, I-Medjat, 12, mars 2015 Open

D Moine · 2015

Il peut paraître singulier de consacrer une étude de plus au célèbre tétradrachme d’Ascalon. De par son origine, il est considéré comme très bien documenté. Il s’agît d’une frappe de la célèbre Cléopâtre VII (69-30 avant J-C), dernière rei…

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