David Teschner
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View article: The dynamics of criminal contagion: a text-mining analysis of offense reports
The dynamics of criminal contagion: a text-mining analysis of offense reports Open
On Cologne's New Year's Eve 2015, many sexual and property offenses were committed in public space. This event marks a caesura in refugee, crime, and media policy in Germany. We conducted a quantitative text-mining analysis of the offense …
View article: The dynamics of criminal contagion: a text-mining analysis of offense reports
The dynamics of criminal contagion: a text-mining analysis of offense reports Open
On Cologne's New Year's Eve 2015, many sexual and property offenses were committed in public space. This event marks a caesura in refugee, crime, and media policy in Germany. We conducted a quantitative text-mining analysis of the offense …
View article: Rustims: An Open-Source Framework for Rapid Development and Processing of timsTOF Data-Dependent Acquisition Data
Rustims: An Open-Source Framework for Rapid Development and Processing of timsTOF Data-Dependent Acquisition Data Open
Mass spectrometry is essential for analyzing and quantifying biological samples. The timsTOF platform is a prominent commercial tool for this purpose, particularly in bottom-up acquisition scenarios. The additional ion mobility dimension r…
View article: Ionmob: a Python package for prediction of peptide collisional cross-section values
Ionmob: a Python package for prediction of peptide collisional cross-section values Open
Motivation Including ion mobility separation (IMS) into mass spectrometry proteomics experiments is useful to improve coverage and throughput. Many IMS devices enable linking experimentally derived mobility of an ion to its collisional cro…
View article: midiaPASEF maximizes information content in data-independent acquisition proteomics
midiaPASEF maximizes information content in data-independent acquisition proteomics Open
Data-independent acquisition (DIA) approaches provide comprehensive records of all detectable pre-cursor and fragment ions. Here we introduce midiaPASEF, a novel DIA scan mode using mobility-specific micro-encoding of overlapping quadrupol…
View article: Ionmob: A Python Package for Prediction of Peptide Collisional Cross-Section Values
Ionmob: A Python Package for Prediction of Peptide Collisional Cross-Section Values Open
Pre-processed datasets used to train machine learning models of ionmob python package: https://github.com/theGreatHerrLebert/ionmob
View article: Ionmob: A Python Package for Prediction of Peptide Collisional Cross-Section Values
Ionmob: A Python Package for Prediction of Peptide Collisional Cross-Section Values Open
Pre-processed datasets used to train machine learning models of ionmob python package: https://github.com/theGreatHerrLebert/ionmob
View article: Locality-sensitive hashing enables signal classification in high-throughput mass spectrometry raw data at scale
Locality-sensitive hashing enables signal classification in high-throughput mass spectrometry raw data at scale Open
Mass spectrometry is an important experimental technique in the field of proteomics. However, analysis of certain mass spectrometry data faces a combination of two challenges: First, even a single experiment produces a large amount of mult…
View article: CorCast: A Distributed Architecture for Bayesian Epidemic Nowcasting and its Application to District-Level SARS-CoV-2 Infection Numbers in Germany
CorCast: A Distributed Architecture for Bayesian Epidemic Nowcasting and its Application to District-Level SARS-CoV-2 Infection Numbers in Germany Open
Timely information on current infection numbers during an epidemic is of crucial importance for decision makers in politics, medicine, and businesses. As information about local infection risk can guide public policy as well as individual …
View article: Corrigendum: Species Richness, rRNA Gene Abundance, and Seasonal Dynamics of Airborne Plant-Pathogenic Oomycetes
Corrigendum: Species Richness, rRNA Gene Abundance, and Seasonal Dynamics of Airborne Plant-Pathogenic Oomycetes Open
[This corrects the article DOI: 10.3389/fmicb.2018.02673.].
View article: Species Richness, rRNA Gene Abundance, and Seasonal Dynamics of Airborne Plant-Pathogenic Oomycetes
Species Richness, rRNA Gene Abundance, and Seasonal Dynamics of Airborne Plant-Pathogenic Oomycetes Open
Oomycetes, also named Peronosporomycetes, are one of the most important and widespread groups of plant pathogens, leading to significant losses in the global agricultural productivity. They have been studied extensively in ground water, so…
View article: Community composition and seasonal changes of archaea in coarse and fine air particulate matter
Community composition and seasonal changes of archaea in coarse and fine air particulate matter Open
Archaea are ubiquitous in terrestrial and marine environments and play an important role in biogeochemical cycles. Although air acts as the primary medium for their dispersal among different habitats, their diversity and abundance is not w…
View article: Community composition and seasonal changes of archaea in coarse and fine air particulate matter
Community composition and seasonal changes of archaea in coarse and fine air particulate matter Open
Archaea are ubiquitous in terrestrial and marine environments and play an important role in biogeochemical cycles. Although air acts as the primary medium for their dispersal among different habitats, their diversity and abundance is not w…