Dev Mani Pandey
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View article: Analysis of Supervised Machine Learning Techniques to Assess Water Quality
Analysis of Supervised Machine Learning Techniques to Assess Water Quality Open
View article: Navigating the Fitness Landscapes of Plasmodium falciparum Dihydrofolate Reductase: Evolutionary Insights into Antifolate Resistance
Navigating the Fitness Landscapes of Plasmodium falciparum Dihydrofolate Reductase: Evolutionary Insights into Antifolate Resistance Open
The rapid emergence of drug resistance in malaria parasites poses a significant challenge to the efficacy of antifolate treatments. Traditional drug development approaches, which often rely on empirical screening with limited mechanistic i…
View article: Transcriptome analyses revealed differential gene expression patterns in contrasting rice landraces as a response to acidic or proton toxicity stress
Transcriptome analyses revealed differential gene expression patterns in contrasting rice landraces as a response to acidic or proton toxicity stress Open
Acidic soil is harmful for plants and limits its growth. Four different rice landraces of Jharkhand, India, i.e., Jhilli Dhan, Gora Dhan, Desi Lalat Dhan and Khijur Jhopa Dhan were screened physiologically to identify low pH (acid) -sensit…
View article: Antheraea mylitta cocoonase: An explorable protease
Antheraea mylitta cocoonase: An explorable protease Open
Aim: The study was conducted to explore the insect secreted protease Antheraea mylitta cocoonase. Methodology: The cocoons of eleven ecoraces were collected followed by observation of cocoonase secretion behaviour, cocoonase collection, pu…
View article: Computational models for prediction of protein–protein interaction in rice and Magnaporthe grisea
Computational models for prediction of protein–protein interaction in rice and Magnaporthe grisea Open
Introduction Plant–microbe interactions play a vital role in the development of strategies to manage pathogen-induced destructive diseases that cause enormous crop losses every year. Rice blast is one of the severe diseases to rice Oryza s…
View article: Identification of flavonol synthase gene from M. pinnata and its functional elucidation using cowpea genome
Identification of flavonol synthase gene from M. pinnata and its functional elucidation using cowpea genome Open
Background Flavonoids are a class of key polyphenolic secondary metabolites having various roles in plants, like in growth and development, stress defense, and reproduction. Dihydroflavonols are converted into flavonols by flavonol synthas…
View article: In silico structural and functional characterization of Antheraea mylitta cocoonase
In silico structural and functional characterization of Antheraea mylitta cocoonase Open
View article: Editorial: Drought Threat: Responses and Molecular-Genetic Mechanisms of Adaptation and Tolerance in Wheat
Editorial: Drought Threat: Responses and Molecular-Genetic Mechanisms of Adaptation and Tolerance in Wheat Open
EDITORIAL article Front. Plant Sci., 30 June 2022Sec. Plant Abiotic Stress https://doi.org/10.3389/fpls.2022.960162
View article: ACC deaminase producing rhizobacterium Enterobacter cloacae ZNP-4 enhance abiotic stress tolerance in wheat plant
ACC deaminase producing rhizobacterium Enterobacter cloacae ZNP-4 enhance abiotic stress tolerance in wheat plant Open
Plant growth promoting rhizobacterium (PGPR) designated as ZNP-4, isolated from the rhizosphere of Ziziphus nummularia , was identified as Enterobacter cloacae following 16S rRNA sequence analysis. The isolated strain exhibited various pla…
View article: The molecular docking and molecular dynamics study of flavonol synthase and flavonoid 3’-monooxygenase enzymes involved for the enrichment of kaempferol
The molecular docking and molecular dynamics study of flavonol synthase and flavonoid 3’-monooxygenase enzymes involved for the enrichment of kaempferol Open
Kaempferol is a natural flavonol that shows many pharmacological properties including anti-inflammatory, antioxidant, anticancer, antidiabetic activities etc. It has been reported in many vegetables, fruits, herbs and medicinal plants. The…
View article: Study on cocoonase, sericin, and degumming of silk cocoon: computational and experimental
Study on cocoonase, sericin, and degumming of silk cocoon: computational and experimental Open
Present study enlightens on the detailed characteristics of cocoonase and sericin proteins, comparative degumming activity, and image analysis of cocoonase enzyme and Na2CO3 chemical-treated silk sheets. Obtained find…
View article: Physiological, Biochemical and Microstructural Changes in Rice (<i>Oryza sativa</i>L.) under Varying pH Levels
Physiological, Biochemical and Microstructural Changes in Rice (<i>Oryza sativa</i>L.) under Varying pH Levels Open
Soil acidification exerts detrimental effects on rice plant leading to severe reduction in its yield. In the present study, we investigated the physiological, biochemical and microstructural changes in the leaves of rice cultivars, namely,…
View article: Extrapolating the effect of non-synonymous SNP in bread wheat HSP16.9B gene: a molecular modelling and dynamics study
Extrapolating the effect of non-synonymous SNP in bread wheat HSP16.9B gene: a molecular modelling and dynamics study Open
Small heat shock proteins (sHSP) are molecular chaperons which play a key role in protein homeostasis under stress conditions. Point mutation of aspartic acid (D) substitution for asparagine (N) at residue 11 (D11N) in HSP16.9B protein was…
View article: Anticancer activity of plant leaves extract collected from a tribal region of India
Anticancer activity of plant leaves extract collected from a tribal region of India Open
View article: Identification of GCC-box and TCC-box motifs in the promoters of differentially expressed genes in rice (Oryza sativa L.): Experimental and computational approaches
Identification of GCC-box and TCC-box motifs in the promoters of differentially expressed genes in rice (Oryza sativa L.): Experimental and computational approaches Open
The transcription factor selectively binds with the cis-regulatory elements of the promoter and regulates the differential expression of genes. In this study, we aimed to identify and validate the presence of GCC-box and TCC-box motifs in …
View article: Method development for optimised green synthesis of gold nanoparticles from <i>Millettia pinnata</i> and their activity in non‐small cell lung cancer cell lines
Method development for optimised green synthesis of gold nanoparticles from <i>Millettia pinnata</i> and their activity in non‐small cell lung cancer cell lines Open
Green synthesis of gold nanoparticles (GNPs) has received substantial attention, because nanoparticles are produced in an eco‐friendly way using biomolecules present in plant extracts in a single step reaction. This research article highli…
View article: Identification of Groundnut miRNA and their targets
Identification of Groundnut miRNA and their targets Open
MicroRNA (miRNA) are ~22nt small non-coding RNA molecules which play an important role in post-transcriptional gene regulation in both plants and animals. As the miRNAs are highly conserved among species, comparative genomics based homolog…
View article: Genes Involved in the Biosynthesis of Lac Dye Constituents in Indian Lac Insect, Kerria lacca (Kerr)
Genes Involved in the Biosynthesis of Lac Dye Constituents in Indian Lac Insect, Kerria lacca (Kerr) Open
Kerria lacca is commercially harnessed for lac resin, dye and wax. This study is an attempt towards identifying the possible pathway and genes involved in the biosynthesis of the lac dye. It is proposed that lac insects employ polyk…
View article: Lac dye as a potential anti-neoplastic agent
Lac dye as a potential anti-neoplastic agent Open
Both crimson and yellow lac dye inhibits proliferation of Human leukemia cell lines, Raji, U937, K562, HL60 and Jurkat, therefore can be considered as a potential anticancer agent for leukemia.
View article: Transcriptional Regulatory Network Analysis of MYB Transcription Factor Family Genes in Rice
Transcriptional Regulatory Network Analysis of MYB Transcription Factor Family Genes in Rice Open
MYB transcription factor (TF) is one of the largest TF families and regulates defense responses to various stresses, hormone signaling as well as many metabolic and developmental processes in plants. Understanding these regulatory hierarch…
View article: Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis
Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis Open
Small non-coding RNAs (sRNAs) namely microRNAs (miRNAs) and trans-acting small interfering RNAs (tasi-RNAs) play a crucial role in post-transcriptional regulation of gene expression and thus the control plant development and stress respons…
View article: MAIZE RHIZOSPHERE MICROBIAL POPULATION IN SOILS OF JHARKHAND
MAIZE RHIZOSPHERE MICROBIAL POPULATION IN SOILS OF JHARKHAND Open
Objective: The main objective of the present investigation is to isolate plant growth promoting rhizobacteria (PGPR) strains from three different zone of rhizosphere and arhizosphere soil, observing bacterial density and exploring rhizosp…
View article: MOLECULAR BEACON PROBE BASED PROMOTER MOTIFS VALIDATION IN ANOXIA RESPONSIVE DIFFERENTIALLY EXPRESSED GENES AND THEIR IN SILICO INTERACTION STUDIES WITH AP2/EREBP TF IN RICE (ORYZA SATIVA L.)
MOLECULAR BEACON PROBE BASED PROMOTER MOTIFS VALIDATION IN ANOXIA RESPONSIVE DIFFERENTIALLY EXPRESSED GENES AND THEIR IN SILICO INTERACTION STUDIES WITH AP2/EREBP TF IN RICE (ORYZA SATIVA L.) Open
Objective: Progressive evolution in molecular biology revealed the differential expression of genes and their regulatory mechanism in rice under anoxia. In addition to that the consensus promoter motifs (GCC and TCC box) were identified i…