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View article: Biases in simulating Amazon moisture transport: a convection-permitting vs regional climate model intercomparison
Biases in simulating Amazon moisture transport: a convection-permitting vs regional climate model intercomparison Open
The dynamics of moisture transport in the Amazon are key to the South American water cycle. Convection-permitting regional climate models (CPRCMs) offer a valuable tool to better understand these processes. This study evaluates integrated …
View article: Rethinking the Spanish plume: An airstream analysis challenges the canonical conceptual model
Rethinking the Spanish plume: An airstream analysis challenges the canonical conceptual model Open
The canonical Spanish plume is a summertime southerly airstream that is heated while travelling across the Meseta Central on the Iberian Peninsula, developing into an elevated mixed layer farther poleward. A recent review of the literature…
View article: Encoding of body state in whisker-related somatosensory cortex of freely moving mice
Encoding of body state in whisker-related somatosensory cortex of freely moving mice Open
Sensory systems have evolved to solve computational challenges that animals face during behavior in their natural environments. To illuminate how the sensory cortex operates under such conditions, we investigated the function of neurons in…
View article: Enhancing Digital Infrastructures and Data Handling Practices for Single Specimen Barcoding - the 2024 BGE Barcoding Hackathon
Enhancing Digital Infrastructures and Data Handling Practices for Single Specimen Barcoding - the 2024 BGE Barcoding Hackathon Open
The 2024 BGE Barcoding Hackathon, hosted by the Biodiversity Genomics Europe (BGE) project in Leiden, Netherlands, focused on advancing digital infrastructures and data handling practices for single specimen barcoding. This event brought t…
View article: RO-Crate Metadata Specification 1.2.0
RO-Crate Metadata Specification 1.2.0 Open
Web-version: https://w3id.org/ro/crate/1.2 This document specifies a method, known as RO-Crate (Research Object Crate), of aggregating and describing data for distribution, re-use, publishing, preservation and archiving. RO-Crates aggregat…
View article: WITHDRAWN
WITHDRAWN Open
View article: Simulating organic aerosol in Delhi with WRF-Chem using the volatility-basis-set approach: exploring model uncertainty with a Gaussian process emulator
Simulating organic aerosol in Delhi with WRF-Chem using the volatility-basis-set approach: exploring model uncertainty with a Gaussian process emulator Open
The nature and origin of organic aerosol in the atmosphere remain unclear. The gas–particle partitioning of semi-volatile organic compounds (SVOCs) that constitute primary organic aerosols (POAs) and the multigenerational chemical aging of…
View article: Scenario Configurations for Simulating Organic Aerosol in Delhi using WRF-Chem and a VBS Approach
Scenario Configurations for Simulating Organic Aerosol in Delhi using WRF-Chem and a VBS Approach Open
Parameter configuration files for a study into the sensitivity of model predictions (in this case WRF-Chem) of organic aerosol mass loadings, and composition, to organic aerosol production processes. The production processes for both anthr…
View article: Scenario Configurations for Simulating Organic Aerosol in Delhi using WRF-Chem and a VBS Approach
Scenario Configurations for Simulating Organic Aerosol in Delhi using WRF-Chem and a VBS Approach Open
Parameter configuration files for a study into the sensitivity of model predictions (in this case WRF-Chem) of organic aerosol mass loadings, and composition, to organic aerosol production processes. The production processes for both anthr…
View article: WRF/EMEP UK Workflow Inputs
WRF/EMEP UK Workflow Inputs Open
Example input data for a linear WRF/EMEP workflow.\n\n\nSetup is a small (60x90 grid cells, 30 vertical levels) domain over the UK, to be run for 4.75 days. Intermediate inputs are included so that different stages of the workflow can be r…
View article: WRF/EMEP UK Workflow Inputs
WRF/EMEP UK Workflow Inputs Open
Example input data for a linear WRF/EMEP workflow. Setup is a small (60x90 grid cells, 30 vertical levels) domain over the UK, to be run for 4.75 days. Intermediate inputs are included so that different stages of the workflow can be run in…
View article: WRF/EMEP UK Workflow Inputs
WRF/EMEP UK Workflow Inputs Open
Example input data for a linear WRF/EMEP workflow. Setup is a small (60x90 grid cells, 30 vertical levels) domain over the UK, to be run for 4.75 days. Intermediate inputs are included so that different stages of the workflow can be run in…
View article: Deforestation and changes in rainfall across the Amazon – reducing uncertainty using a continental scale convection permitting domain
Deforestation and changes in rainfall across the Amazon – reducing uncertainty using a continental scale convection permitting domain Open
The Amazon rainforest holds more than 40% of all remaining tropical rainforest and is a key component of the climate system. The scale of deforestation in the Amazon significantly impacts both local and global climates. Under a business-as…
View article: A comparison of experience sampled hay fever symptom severity across rural and urban areas of the UK
A comparison of experience sampled hay fever symptom severity across rural and urban areas of the UK Open
Hay fever affects people differently and can change over a lifetime, but data is lacking on how environmental factors may influence this. This study is the first to combine atmospheric sensor data with real-time, geo-positioned hay fever s…
View article: Sources of surface O <sub>3</sub> in the UK: tagging O <sub>3</sub> within WRF-Chem
Sources of surface O <sub>3</sub> in the UK: tagging O <sub>3</sub> within WRF-Chem Open
Tropospheric ozone (O3) concentrations depend on a combination of hemispheric, regional, and local-scale processes. Estimates of how much O3 is produced locally vs. transported from further afield are essential in air quality management an…
View article: A comparison of experience sampled hay fever symptom severity across rural and urban areas of the UK
A comparison of experience sampled hay fever symptom severity across rural and urban areas of the UK Open
Hay fever affects people differently and can change over a lifetime, but data is lacking on how environmental factors may influence this. This study is the first to combine atmospheric sensor data with real-time, geo-positioned hay fever s…
View article: BioExcel-2 D2.7 – Final release of demonstration workflows
BioExcel-2 D2.7 – Final release of demonstration workflows Open
<p>This deliverable presents the final release of demonstration workflows for the BioExcel-2 project, including a wrap-up of all the work done for the BioBB library, its associated workflows, and a final analysis of the milestones ac…
View article: Comment on acp-2022-173
Comment on acp-2022-173 Open
Tropospheric ozone (O3) concentrations are known to depend on a combination of hemispheric, regional, and local-scale processes. Estimates of how much O3 is produced locally vs. transported from further afield are essential in air quality …
View article: Comment on acp-2022-173
Comment on acp-2022-173 Open
Abstract. Tropospheric ozone (O3) concentrations are known to depend on a combination of hemispheric, regional, and local-scale processes. Estimates of how much O3 is produced locally vs. transported …
View article: The 'Mine-the-Gaps' geospatial web application for visualizing and evaluating regional environmental data estimates
The 'Mine-the-Gaps' geospatial web application for visualizing and evaluating regional environmental data estimates Open
<p>We present the 'Mine-the-Gaps' geospatial web application and use it to present our recently published series of cleaned and imputed environmental datasets. The Mine-the-Gaps tool positions environment sensor and regional estimati…
View article: Sources of Surface O <sub>3</sub> in the UK: Tagging O <sub>3</sub> within WRF-Chem
Sources of Surface O <sub>3</sub> in the UK: Tagging O <sub>3</sub> within WRF-Chem Open
Tropospheric ozone (O3) concentrations are known to depend on a combination of hemispheric, regional, and local-scale processes. Estimates of how much O3 is produced locally vs. transported from further afield are essential in air quality …
View article: Supplementary material to "Sources of Surface O <sub>3</sub> in the UK: Tagging O <sub>3</sub> within WRF-Chem"
Supplementary material to "Sources of Surface O <sub>3</sub> in the UK: Tagging O <sub>3</sub> within WRF-Chem" Open
S1. Model evaluationS1.
View article: 10 Simple Rules for making a software tool workflow-ready
10 Simple Rules for making a software tool workflow-ready Open
Workflows have become a core part of computational scientific analysis in recent years. Automated computational workflows multiply the power of researchers, potentially turning “hand-cranked” data processing by informaticians into robust f…
View article: Ten Simple Rules for making a software tool workflow-ready
Ten Simple Rules for making a software tool workflow-ready Open
Workflows have become a core part of computational scientific analysis in recent years. Automated computational workflows multiply the power of researchers, potentially turning “hand-cranked” data processing by informaticians into robust f…
View article: Ten simple rules for making a software tool workflow-ready
Ten simple rules for making a software tool workflow-ready Open
View article: UK daily meteorology, air quality, and pollen measurements for 2016–2019, with estimates for missing data
UK daily meteorology, air quality, and pollen measurements for 2016–2019, with estimates for missing data Open
In recent years, quantifying the impacts of detrimental air quality has become a global priority for researchers and policy makers. At present, the systems and methodologies supporting the collection and manipulation of this data are diffi…
View article: Making Canonical Workflow Building Blocks Interoperable across Workflow Languages
Making Canonical Workflow Building Blocks Interoperable across Workflow Languages Open
We introduce the concept of Canonical Workflow Building Blocks (CWBB), a methodology of describing and wrapping computational tools, in order for them to be utilised in a reproducible manner from multiple workflow languages and execution p…
View article: Making Canonical Workflow Building Blocks interoperable across workflow languages
Making Canonical Workflow Building Blocks interoperable across workflow languages Open
We introduce the concept of Canonical Workflow Building Blocks (CWBB), a methodology of describing and wrapping computational tools, in order for them to be utilised in a reproducible manner from multiple workflow languages and execution p…
View article: BioExcel-2 Deliverable 2.6 – Integration of BioExcel software framework with standards and international initiatives
BioExcel-2 Deliverable 2.6 – Integration of BioExcel software framework with standards and international initiatives Open
This deliverable details the integration of the BioExcel computational framework with external initiatives and standards for the purpose of interoperability and portability, as well as wider FAIR aspects on discoverability and metadata. An…
View article: 10 Simple Rules for making a software tool workflow-ready
10 Simple Rules for making a software tool workflow-ready Open
Workflows have become a core part of computational scientific analysis in recent years. Automated computational workflows multiply the power of researchers, potentially turning “hand-cranked” data processing by informaticians into robust f…