Yuri Corilo
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View article: Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States Open
Despite the importance of microbial soil organic matter (SOM) respiration in regulating the flux of carbon between soils and the atmosphere, soil carbon cycling models remain primarily based on climate and soil properties, leading to large…
View article: FREDA: A Web Application for the Processing, Analysis, and Visualization of Fourier‐Transform Mass Spectrometry Data
FREDA: A Web Application for the Processing, Analysis, and Visualization of Fourier‐Transform Mass Spectrometry Data Open
Rationale The high‐resolution measurement capability of Fourier‐transform mass spectrometry (FT‐MS) has made it a necessity for exploring the molecular composition of complex organic mixtures, like soil, plant, aquatic, and petroleum sampl…
View article: Standardized and accessible multi-omics bioinformatics workflows through the NMDC EDGE resource
Standardized and accessible multi-omics bioinformatics workflows through the NMDC EDGE resource Open
Accessible and easy-to-use standardized bioinformatics workflows are necessary to advance microbiome research from observational studies to large-scale, data-driven approaches. Standardized multi-omics data enables comparative studies, dat…
View article: Annotation of DOM metabolomes with an ultrahigh resolution mass spectrometry molecular formula library
Annotation of DOM metabolomes with an ultrahigh resolution mass spectrometry molecular formula library Open
Increased accessibility of liquid chromatography mass spectrometry (LC-MS) metabolomics instrumentation and software have expanded their use in studies of dissolved organic matter (DOM) and exometabolites released by microbes. Current stra…
View article: Scaling High-resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
Scaling High-resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States Open
Despite the importance of microbial respiration of soil organic matter (SOM) in regulating carbon flux between soils and atmosphere, soil carbon cycling models remain primarily based on climate and soil properties, leading to large uncerta…
View article: Relating Molecular Properties to the Persistence of Marine Dissolved Organic Matter with Liquid Chromatography–Ultrahigh-Resolution Mass Spectrometry
Relating Molecular Properties to the Persistence of Marine Dissolved Organic Matter with Liquid Chromatography–Ultrahigh-Resolution Mass Spectrometry Open
Marine dissolved organic matter (DOM) contains a complex mixture of small molecules that eludes rapid biological degradation. Spatial and temporal variations in the abundance of DOM reflect the existence of fractions that are removed from …
View article: Evaluating Retention Index Score Assumptions to Refine GC–MS Metabolite Identification
Evaluating Retention Index Score Assumptions to Refine GC–MS Metabolite Identification Open
As metabolomics grows into a high-throughput and high demand research field, current metrics for the identification of small molecules in gas chromatography-mass spectrometry (GC-MS) still require manual verification. Though steps have bee…
View article: Gaussian Mixture Modeling Extensions for Improved False Discovery Rate Estimation in GC-MS Metabolomics
Gaussian Mixture Modeling Extensions for Improved False Discovery Rate Estimation in GC-MS Metabolomics Open
The ability to reliably identify small molecules (e.g. metabolites) is key towards driving scientific advancement in metabolomics. Gas chromatography mass spectrometry (GCMS) is an analytic method that may be applied to facilitate this pro…
View article: Evaluating Retention Index Score Assumptions to Refine GC-MS Metabolite Identification
Evaluating Retention Index Score Assumptions to Refine GC-MS Metabolite Identification Open
As metabolomics grows into a high-throughput and high demand research field, current metrics for the identification of small molecules in GC-MS still require manual verification. Though steps have been taken to improve scoring metrics by c…