Edwin Skidmore
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AI-VERDE: A Gateway for Egalitarian Access to Large Language Model-Based Resources For Educational Institutions Open
We present AI-VERDE, a unified LLM-as-a-platform service designed to facilitate seamless integration of commercial, cloud-hosted, and on-premise open LLMs in academic settings. AI-VERDE streamlines access management for instructional and r…
View article: Persistent monitoring of insect-pests on sticky traps through hierarchical transfer learning and slicing-aided hyper inference
Persistent monitoring of insect-pests on sticky traps through hierarchical transfer learning and slicing-aided hyper inference Open
Introduction Effective monitoring of insect-pests is vital for safeguarding agricultural yields and ensuring food security. Recent advances in computer vision and machine learning have opened up significant possibilities of automated persi…
View article: MDRepo—an open data warehouse for community-contributed molecular dynamics simulations of proteins
MDRepo—an open data warehouse for community-contributed molecular dynamics simulations of proteins Open
Molecular Dynamics (MD) simulation of biomolecules provides important insights into conformational changes and dynamic behavior, revealing critical information about folding and interactions with other molecules. The collection of simulati…
View article: MDRepo – an open environment for data warehousing and knowledge discovery from molecular dynamics simulations
MDRepo – an open environment for data warehousing and knowledge discovery from molecular dynamics simulations Open
Background Molecular Dynamics (MD) simulation of biomolecules provides important insights into conformational changes and dynamic behavior, revealing critical information about folding and interactions with other molecules. This enables ad…
View article: CyVerse: Cyberinfrastructure for open science
CyVerse: Cyberinfrastructure for open science Open
CyVerse, the largest publicly-funded open-source research cyberinfrastructure for life sciences, has played a crucial role in advancing data-driven research since the 2010s. As the technology landscape evolved with the emergence of cloud c…
Cyberinfrastructure deployments on public research clouds enable accessible Environmental Data Science education Open
Modern science depends on computers, but not all scientists have access to the scale of computation they need. A digital divide separates scientists who accelerate their science using large cyberinfrastructure from those who do not, or who…
Cloud Computing for Research and Education Gets a Sweet Upgrade with CACAO Open
We introduce Cloud Automation and Continuous Analysis Orchestration (CACAO), an open source web platform designed to facilitate access and availability of cloud resources for education and research. By leveraging open source Infrastructure…
View article: CyVerse: Cyberinfrastructure for Open Science
CyVerse: Cyberinfrastructure for Open Science Open
CyVerse, the largest publicly-funded open-source research cyberinfrastructure for life sciences, has played a crucial role in advancing data-driven research since the 2010s. As the technology landscape evolved with the emergence of cloud c…
View article: Jetstream2: Accelerating cloud computing via Jetstream
Jetstream2: Accelerating cloud computing via Jetstream Open
Jetstream2 will be a category I production cloud resource that is part of the National Science Foundation's Innovative HPC Program. The project's aim is to accelerate science and engineering by providing "on-demand" programmable infrastruc…
View article: The iPlant Collaborative: Cyberinfrastructure for Plant Biology
The iPlant Collaborative: Cyberinfrastructure for Plant Biology Open
The iPlant Collaborative (iPlant) is a United States National Science Foundation (NSF) funded project that aims to create an innovative, comprehensive, and foundational cyberinfrastructure in support of plant biology research (PSCIC, 2006)…
CYVERSE: INFORMATICS CYBERINFRASTRUCTURE FOR THE EARTH SCIENCES Open
CyVerse is an NSF funded cyberinfrastructure for the Life Sciences with numerous applications in Earth Sciences. CyVerse resources are free to US based researchers and can leverage modern research computing software and hardware. This pres…
CyVerse: Scalable Image Informatics Open
Poster on cyberinfrastructure for the machine learning ere presented at the 2020 BIOME Institute: Cultivating Scientific Curiosity
View article: Jetstream
Jetstream Open
Jetstream is a first-of-a-kind system for the NSF - a distributed production cloud resource. The NSF awarded funds to create Jetstream in November 2014. Here we review the purpose for creating Jetstream, present the acceptance test results…