Ewa Smula
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View article: Visualization of automatically combined disease maps and pathway diagrams for rare diseases
Visualization of automatically combined disease maps and pathway diagrams for rare diseases Open
Introduction: Investigation of molecular mechanisms of human disorders, especially rare diseases, require exploration of various knowledge repositories for building precise hypotheses and complex data interpretation. Recently, increasingly…
View article: Exploration and comparison of molecular mechanisms across diseases using <scp>MINERVA</scp> Net
Exploration and comparison of molecular mechanisms across diseases using <span>MINERVA</span> Net Open
Protein function is often interpreted using molecular interaction diagrams, encoding roles a given protein plays in various molecular mechanisms. Information about disease‐related mechanisms can be inferred from disease maps, knowledge rep…
View article: Smart Scheduling (SMASCH): multi-appointment scheduling system for longitudinal clinical research studies
Smart Scheduling (SMASCH): multi-appointment scheduling system for longitudinal clinical research studies Open
Objective Facilitate the multi-appointment scheduling problems (MASPs) characteristic of longitudinal clinical research studies. Additional goals include: reducing management time, optimizing clinical resources, and securing personally ide…
View article: Erratum To: COVID‐19 Disease Map, a computational knowledge repository of virus‐host interaction mechanisms
Erratum To: COVID‐19 Disease Map, a computational knowledge repository of virus‐host interaction mechanisms Open
View article: COVID‐19 Disease Map, a computational knowledge repository of virus‐host interaction mechanisms
COVID‐19 Disease Map, a computational knowledge repository of virus‐host interaction mechanisms Open
View article: COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms Open
View article: COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms
COVID-19 Disease Map, a computational knowledge repository of SARS-CoV-2 virus-host interaction mechanisms Open
We describe a large-scale community effort to build an open-access, interoperable, and computable repository of COVID-19 molecular mechanisms - the COVID-19 Disease Map. We discuss the tools, platforms, and guidelines necessary for the dis…
View article: MINERVA, A Platform for the Exploration of Disease Maps
MINERVA, A Platform for the Exploration of Disease Maps Open
Disease maps support the process of discovery of disease mechanisms and help in understanding complex cross-talks of multiple pathways. Their diagrammatic content can be used in a range of visually supported analyses, which requires a prop…
View article: MINERVA API and plugins: opening molecular network analysis and visualization to the community
MINERVA API and plugins: opening molecular network analysis and visualization to the community Open
Summary The complexity of molecular networks makes them difficult to navigate and interpret, creating a need for specialized software. MINERVA is a web platform for visualization, exploration and management of molecular networks. Here, we …