Fatih Incekara
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View article: Carl Jung: a life on the edge of reality with hypnagogia, hyperphantasia, and hallucinations
Carl Jung: a life on the edge of reality with hypnagogia, hyperphantasia, and hallucinations Open
Whether the Swiss psychiatrist Carl Jung (1875–1961) became psychotic after his mid-thirties is much debated. His recently published Black Books, a seven-volume journal, reveal new insights into this debate. Based on a phenomenological ana…
View article: Probing the glioma microvasculature: a case series of the comparison between perfusion MRI and intraoperative high-frame-rate ultrafast Doppler ultrasound
Probing the glioma microvasculature: a case series of the comparison between perfusion MRI and intraoperative high-frame-rate ultrafast Doppler ultrasound Open
View article: Evaluating the Predictive Value of Glioma Growth Models for Low-Grade Glioma After Tumor Resection
Evaluating the Predictive Value of Glioma Growth Models for Low-Grade Glioma After Tumor Resection Open
Tumor growth models have the potential to model and predict the spatiotemporal evolution of glioma in individual patients. Infiltration of glioma cells is known to be faster along the white matter tracts, and therefore structural magnetic …
View article: Microvasculature Features Derived from Hybrid EPI MRI in Non-Enhancing Adult-Type Diffuse Glioma Subtypes
Microvasculature Features Derived from Hybrid EPI MRI in Non-Enhancing Adult-Type Diffuse Glioma Subtypes Open
In this study, we used the vessel size imaging (VSI) MRI technique to characterize the microvasculature features of three subtypes of adult-type diffuse glioma lacking enhancement. Thirty-eight patients with confirmed non-enhancing glioma …
View article: Appendix 4 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 4 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Excluded patients from TCIA-1p19qDeletion dataset
View article: Online Figure 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Online Figure 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Overview of importance of imaging and demographic features
View article: Appendix 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Radiogenomics algorithm
View article: Appendix 3 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 3 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Evaluation metrics
View article: Appendix 5 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 5 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Results of mixing EMC/HMC and TCIA datasets
View article: Appendix 3 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 3 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Evaluation metrics
View article: Data from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Data from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Purpose:Patients with 1p/19q codeleted low-grade glioma (LGG) have longer overall survival and better treatment response than patients with 1p/19q intact tumors. Therefore, it is relevant to know the 1p/19q status. To investigate whether t…
View article: Online Figure 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Online Figure 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Overview of the radiogenomics pipeline
View article: Data from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Data from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Purpose:Patients with 1p/19q codeleted low-grade glioma (LGG) have longer overall survival and better treatment response than patients with 1p/19q intact tumors. Therefore, it is relevant to know the 1p/19q status. To investigate whether t…
View article: Appendix 5 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 5 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Results of mixing EMC/HMC and TCIA datasets
View article: Online Figure 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Online Figure 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Overview of the radiogenomics pipeline
View article: Appendix 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Overview of MR settings
View article: Appendix 4 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 4 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Excluded patients from TCIA-1p19qDeletion dataset
View article: Online Figure 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Online Figure 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Overview of importance of imaging and demographic features
View article: Appendix 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 1 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Overview of MR settings
View article: Appendix 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm
Appendix 2 from Predicting the 1p/19q Codeletion Status of Presumed Low-Grade Glioma with an Externally Validated Machine Learning Algorithm Open
Radiogenomics algorithm
View article: Combined molecular subtyping, grading, and segmentation of glioma using multi-task deep learning
Combined molecular subtyping, grading, and segmentation of glioma using multi-task deep learning Open
Background Accurate characterization of glioma is crucial for clinical decision making. A delineation of the tumor is also desirable in the initial decision stages but is time-consuming. Previously, deep learning methods have been develope…
View article: Development and external validation of a clinical prediction model for survival in patients with IDH wild-type glioblastoma
Development and external validation of a clinical prediction model for survival in patients with IDH wild-type glioblastoma Open
OBJECTIVE Prognostication of glioblastoma survival has become more refined due to the molecular reclassification of these tumors into isocitrate dehydrogenase ( IDH ) wild-type and IDH mutant. Since this molecular stratification, however, …
View article: Noninvasive differentiation of molecular subtypes of adult nonenhancing glioma using MRI perfusion and diffusion parameters
Noninvasive differentiation of molecular subtypes of adult nonenhancing glioma using MRI perfusion and diffusion parameters Open
Background Nonenhancing glioma typically have a favorable outcome, but approximately 19–44% have a highly aggressive course due to a glioblastoma genetic profile. The aim of this retrospective study is to use physiological MRI parameters o…
View article: The Erasmus Glioma Database (EGD): Structural MRI scans, WHO 2016 subtypes, and segmentations of 774 patients with glioma
The Erasmus Glioma Database (EGD): Structural MRI scans, WHO 2016 subtypes, and segmentations of 774 patients with glioma Open
View article: Intraoperative B-Mode Ultrasound Guided Surgery and the Extent of Glioblastoma Resection: A Randomized Controlled Trial
Intraoperative B-Mode Ultrasound Guided Surgery and the Extent of Glioblastoma Resection: A Randomized Controlled Trial Open
Background Intraoperative MRI and 5-aminolaevulinic acid guided surgery are useful to maximize the extent of glioblastoma resection. Intraoperative ultrasound is used as a time-and cost-effective alternative, but its value has never been a…
View article: Evaluating glioma growth predictions as a forward ranking problem
Evaluating glioma growth predictions as a forward ranking problem Open
The problem of tumor growth prediction is challenging, but promising results have been achieved with both model-driven and statistical methods. In this work, we present a framework for the evaluation of growth predictions that focuses on t…
View article: Imaging and Resection of Glioblastomain light of molecular markers
Imaging and Resection of Glioblastomain light of molecular markers Open
View article: Mapping tumour heterogeneity with pulsed 3D CEST MRI in non-enhancing glioma at 3 T
Mapping tumour heterogeneity with pulsed 3D CEST MRI in non-enhancing glioma at 3 T Open
View article: WHO 2016 subtyping and automated segmentation of glioma using multi-task deep learning
WHO 2016 subtyping and automated segmentation of glioma using multi-task deep learning Open
Accurate characterization of glioma is crucial for clinical decision making. A delineation of the tumor is also desirable in the initial decision stages but is a time-consuming task. Leveraging the latest GPU capabilities, we developed a s…
View article: WHO 2016 subtyping and automated segmentation of glioma using multi-task\n deep learning
WHO 2016 subtyping and automated segmentation of glioma using multi-task\n deep learning Open
Accurate characterization of glioma is crucial for clinical decision making.\nA delineation of the tumor is also desirable in the initial decision stages but\nis a time-consuming task. Leveraging the latest GPU capabilities, we developed\n…