Gary D. Miller
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View article: Mapping Antarctic Seabird Breeding Occupancy From a Century of Observations to Inform Environmental Management and Conservation
Mapping Antarctic Seabird Breeding Occupancy From a Century of Observations to Inform Environmental Management and Conservation Open
Aim To map presence, absence and ignorance of Antarctic seabird breeding occupancy at the spatial resolution of ice‐free habitat sites to identify knowledge gaps and inform management and conservation. Location East Antarctica between long…
View article: Generating 3D Models of Carbohydrates with GLYCAM-Web
Generating 3D Models of Carbohydrates with GLYCAM-Web Open
The carbohydrate 3D structure-prediction tools (builders) at GLYCAM-Web ( glycam.org ) are widely used for generating experimentally-consistent 3D structures of oligosaccharides suitable for data interpretation, hypothesis generation, simp…
View article: A long and winding road: culture change on data sharing in exposomics
A long and winding road: culture change on data sharing in exposomics Open
Data sharing requires cooperation from data generators (eg, epidemiologists, lab investigators) and data users (eg, epidemiologists, biostatisticians, computer scientists). Data generation and data use in human exposome studies require sig…
View article: The osteoarthritis prevention study (TOPS) - A randomized controlled trial of diet and exercise to prevent Knee Osteoarthritis: Design and rationale
The osteoarthritis prevention study (TOPS) - A randomized controlled trial of diet and exercise to prevent Knee Osteoarthritis: Design and rationale Open
ClinicalTrials.gov Identifier: NCT05946044.
View article: Imprecision and clinical performance of a whole blood high sensitivity point of care troponin I: the first prospective real-time study in suspected acute coronary syndrome
Imprecision and clinical performance of a whole blood high sensitivity point of care troponin I: the first prospective real-time study in suspected acute coronary syndrome Open
Introduction Implementation of accelerated diagnostic protocols (ADP) for suspected ACS, with resultant improvement in patient flow, will be facilitated by the use of point of care (POC) testing. To date there has been no published data on…
View article: Clinical, <scp>Health‐Related</scp> Quality of Life, and Gait Differences Among Obesity Classes in Adults With Knee Osteoarthritis
Clinical, <span>Health‐Related</span> Quality of Life, and Gait Differences Among Obesity Classes in Adults With Knee Osteoarthritis Open
Objective The purpose of this study was to determine whether clinical, health‐related quality of life (HRQL), and gait characteristics in adults with knee osteoarthritis (OA) differed by obesity category. Methods This cross‐sectional analy…
View article: Efficacy and Variability in Plasma Nitrite Levels during Long-Term Supplementation with Nitrate Containing Beetroot Juice
Efficacy and Variability in Plasma Nitrite Levels during Long-Term Supplementation with Nitrate Containing Beetroot Juice Open
Long-term consumption of beetroot juice on efficacy of converting dietary nitrate to plasma nitrate and nitrite was investigated. Adults were randomized to consume either beetroot juice with 380 mg of nitrate (BR) or a beetroot juice place…
View article: The Effects of Graded Protein Intake in Conjunction with Progressive Resistance Training on Skeletal Muscle Outcomes in Older Adults: A Preliminary Trial
The Effects of Graded Protein Intake in Conjunction with Progressive Resistance Training on Skeletal Muscle Outcomes in Older Adults: A Preliminary Trial Open
Many studies have evaluated the effects of resistance training (RT) and protein intake to attenuate the age-related loss of skeletal muscle. However, the effects of graded protein intake with conjunctive RT in older adults are unclear. Old…
View article: Effect of Vitamin C and Protein Supplementation on Plasma Nitrate and Nitrite Response following Consumption of Beetroot Juice
Effect of Vitamin C and Protein Supplementation on Plasma Nitrate and Nitrite Response following Consumption of Beetroot Juice Open
Beetroot juice is a food high in nitrate and is associated with cardiometabolic health benefits and enhanced exercise performance through the production of nitric oxide in the nitrate–nitrite–nitric oxide pathway. Since various food compon…
View article: Philopatry, Mate Fidelity, and Nest-site Fidelity for South Polar Skuas <i>Stercorarius maccormicki</i> at the Vestfold Hills, East Antarctica
Philopatry, Mate Fidelity, and Nest-site Fidelity for South Polar Skuas <i>Stercorarius maccormicki</i> at the Vestfold Hills, East Antarctica Open
Antarctica experiences continual spatial and temporal expansions in human activities, but information to understand how resident species may be impacted is usually inadequate. We analysed resights of South Polar Skuas Stercorarius maccormi…
View article: Correction: A randomized controlled trial of nitrate supplementation in well-trained middle and older-aged adults
Correction: A randomized controlled trial of nitrate supplementation in well-trained middle and older-aged adults Open
[This corrects the article DOI: 10.1371/journal.pone.0235047.].
View article: A randomized controlled trial of nitrate supplementation in well-trained middle and older-aged adults
A randomized controlled trial of nitrate supplementation in well-trained middle and older-aged adults Open
In middle to older-aged well-trained adults, NO3- supplementation has non-significant, albeit highly variable, effects on exercise tolerance. ClinicalTrials.gov Identifier: NCT03371966.
View article: Relationship of Objectively-Measured Habitual Physical Activity to Chronic Inflammation and Fatigue in Middle-Aged and Older Adults
Relationship of Objectively-Measured Habitual Physical Activity to Chronic Inflammation and Fatigue in Middle-Aged and Older Adults Open
Habitual (non-exercise) physical activity (PA) declines with age, and aging-related increases in inflammation and fatigue may be important contributors to variability in PA.
View article: Correction to: High-coverage genomes to elucidate the evolution of penguins
Correction to: High-coverage genomes to elucidate the evolution of penguins Open
In the original version of the article “High-coverage genomes to elucidate the evolution of penguins” by Hailin Pan et al. [1], the authors received a request to make some clarifications and changes in the acknowledgements, the following i…
View article: Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird
Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird Open
Over evolutionary time, pathogen challenge shapes the immune phenotype of the host to better respond to an incipient threat. The extent and direction of this selection pressure depend on the local pathogen composition, which is in turn det…
View article: Receding ice drove parallel expansions in Southern Ocean penguins
Receding ice drove parallel expansions in Southern Ocean penguins Open
Climate shifts are key drivers of ecosystem change. Despite the critical importance of Antarctica and the Southern Ocean for global climate, the extent of climate-driven ecological change in this region remains controversial. In particular…
View article: High-coverage genomes to elucidate the evolution of penguins
High-coverage genomes to elucidate the evolution of penguins Open
Background Penguins (Sphenisciformes) are a remarkable order of flightless wing-propelled diving seabirds distributed widely across the southern hemisphere. They share a volant common ancestor with Procellariiformes close to the Cretaceous…
View article: Tree, xml, and log files for Fig. S8 [B] in Cole et al. (2019).
Tree, xml, and log files for Fig. S8 [B] in Cole et al. (2019). Open
This file contains the tree, log and xml files for the calibrated Yule penguin phylogeny (Fig S8 [B]) in Cole et al. (2019).
View article: Mapped BAM files
Mapped BAM files Open
This file contain the mapped BAM files of each ancient penguin mitochondrion genome (mapped using BWAv.0.7.8 [Li and Durbin, 2009]) against Megadyptes antipodes richdalei (ACAD12997), Eudyptes sclateri (AD302) and Eudyptes warhami (AD342) …
View article: Fasta files
Fasta files Open
This file contains .Fasta files for four mitochondrial genome sequences that had <85% coverage (all Eudyptes warhami and one Megadyptes antipodes richdalei sample from the Chatham Islands an aligned and untrimmed .fasta file of all mitocho…
View article: Tree, Log and xml files for Fig. S9 from Cole et al. (2019).
Tree, Log and xml files for Fig. S9 from Cole et al. (2019). Open
This file contains the tree, log and xml files for the calibrated penguin phylogenies (Figure S9) in Cole et al. (2019).
View article: Unmapped Ancient DNA sequencing reads
Unmapped Ancient DNA sequencing reads Open
These files contain the collapsed unmapped fastq.gz files for each ancient penguin mitochondrion genome.
View article: Tree, xml and log files for the calibrated tests (Fig. S7) in Cole et al. 2019.
Tree, xml and log files for the calibrated tests (Fig. S7) in Cole et al. 2019. Open
This file contains the tree, log and xml files for the calibrated test files (Birth death and calibrated yule process model) in Cole et al. (2019) (Fig. S7), with Phoebastria albatrus as the outgroup.
View article: Tree, log and xml files for the Birth-Death calibrated tree (Figure 1 and Figure S8 [A]) in Cole et al. (2019).
Tree, log and xml files for the Birth-Death calibrated tree (Figure 1 and Figure S8 [A]) in Cole et al. (2019). Open
This file contains the tree, log and xml files for the calibrated penguin phylogeny (Figure 1 and Fig S8 [A]) in Cole et al. (2019).
View article: Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins
Comparative population genomics reveals key barriers to dispersal in Southern Ocean penguins Open
The mechanisms that determine patterns of species dispersal are important factors in the production and maintenance of biodiversity. Understanding these mechanisms helps to forecast the responses of species to environmental change. Here, w…
View article: Effect of intensive diet and exercise on self-efficacy in overweight and obese adults with knee osteoarthritis: The IDEA randomized clinical trial
Effect of intensive diet and exercise on self-efficacy in overweight and obese adults with knee osteoarthritis: The IDEA randomized clinical trial Open
Physical activity decreases the risk of osteoarthritis (OA)-related disability; however, pain and lack of confidence represent barriers for older adults with knee OA. The purpose of this study was to examine (a) the baseline associations a…