Genlou Sun
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View article: Comparative Chloroplast Genomes to Gain Insights into the Phylogenetic Relationships and Evolution of Opisthopappus Species
Comparative Chloroplast Genomes to Gain Insights into the Phylogenetic Relationships and Evolution of Opisthopappus Species Open
The investigation and comparison of chloroplast genomes facilitate our deeper elucidation of the evolutionary dynamics and phylogenetics of plant species, particularly non-model plants. Opisthopappus is a genus of Asteraceae that is endemi…
View article: Genome-wide analysis of the WRKY gene family in lily and functional characterization of LdWRKY87 in response to heat stress
Genome-wide analysis of the WRKY gene family in lily and functional characterization of LdWRKY87 in response to heat stress Open
View article: Unraveling the regulatory network of barley grain metabolism through the integrative analysis of multiomics and mQTL
Unraveling the regulatory network of barley grain metabolism through the integrative analysis of multiomics and mQTL Open
View article: QTL Identification and Candidate Gene Prediction for Spike-Related Traits in Barley
QTL Identification and Candidate Gene Prediction for Spike-Related Traits in Barley Open
Barley (Hordeum vulgare L.) is one of the most important cereal crops in the world, and its production is important to humans. Barley spike morphology is highly correlated with yield and is also a complex multigene-controlled quantitative …
View article: Impact of Starch Composition Characteristics on Processing Quality in Wheat Mutant M393
Impact of Starch Composition Characteristics on Processing Quality in Wheat Mutant M393 Open
View article: Genome-wide screening of meta-QTL and candidate genes controlling yield and yield-related traits in barley (Hordeum vulgare L.)
Genome-wide screening of meta-QTL and candidate genes controlling yield and yield-related traits in barley (Hordeum vulgare L.) Open
Increasing yield is an important goal of barley breeding. In this study, 54 papers published from 2001–2022 on QTL mapping for yield and yield-related traits in barley were collected, which contained 1080 QTLs mapped to the barley high-den…
View article: Identification and Analysis of lncRNA and circRNA Related to Wheat Grain Development
Identification and Analysis of lncRNA and circRNA Related to Wheat Grain Development Open
The role of lncRNA and circRNA in wheat grain development is still unclear. The objectives of this study were to characterize the lncRNA and circRNA in the wheat grain development and to construct the interaction network among lncRNA, circ…
View article: Genome-wide identification, characterization and expression of C2H2 zinc finger gene family in Opisthopappus species under salt stress
Genome-wide identification, characterization and expression of C2H2 zinc finger gene family in Opisthopappus species under salt stress Open
Background The C2H2 zinc finger protein family plays important roles in plants. However, precisely how C2H2s function in Opisthopappus ( Opisthopappus taihangensis and Opisthopappus longilobus ) remains unclear. Results In this study, a to…
View article: Potential Response Patterns of Endogenous Hormones in Cliff Species Opisthopappus taihangensis and Opisthopappus longilobus under Salt Stress
Potential Response Patterns of Endogenous Hormones in Cliff Species Opisthopappus taihangensis and Opisthopappus longilobus under Salt Stress Open
When plants are exposed to salt stress, endogenous hormones are essential for their responses through biosynthesis and signal transduction pathways. However, the roles of endogenous hormones in two cliff species (Opisthopappus taihangensis…
View article: Responsive Alternative Splicing Events of Opisthopappus Species against Salt Stress
Responsive Alternative Splicing Events of Opisthopappus Species against Salt Stress Open
Salt stress profoundly affects plant growth, prompting intricate molecular responses, such as alternative splicing (AS), for environmental adaptation. However, the response of AS events to salt stress in Opisthopappus (Opisthopappus taihan…
View article: Bacterial Community Structure in Rhizosphere of Barley at Maturity Stage
Bacterial Community Structure in Rhizosphere of Barley at Maturity Stage Open
The crop rhizosphere is the main site of soil microbial activities. Understanding the structure and diversity of microbial communities in the crop rhizosphere will help us reveal interactions between rhizosphere microorganisms and plant gr…
View article: Conjunctive Analyses of BSA-Seq and BSR-Seq to Identify Candidate Genes Controlling the Black Lemma and Pericarp Trait in Barley
Conjunctive Analyses of BSA-Seq and BSR-Seq to Identify Candidate Genes Controlling the Black Lemma and Pericarp Trait in Barley Open
Black barley seeds are a health-beneficial diet resource because of their special chemical composition and antioxidant properties. The black lemma and pericarp (BLP) locus was mapped in a genetic interval of 0.807 Mb on chromosome 1H, but …
View article: Conjunctive Analyses of BSA-Seq and BSR-Seq to Identify Candidate Genes Controlling the Black Lemma and Pericarp Trait in Barley
Conjunctive Analyses of BSA-Seq and BSR-Seq to Identify Candidate Genes Controlling the Black Lemma and Pericarp Trait in Barley Open
Black barley seeds are a health-beneficial diet resource because of their special chemical composition and antioxidant properties. The black lemma and pericarp (BLP) locus was mapped in a genetic interval of 0.807 Mb on chromosome 1H, but …
View article: N6-Methyladenosine and physiological response divergence confer autotetraploid enhanced salt tolerance compared to its diploid Hordeum bulbosum
N6-Methyladenosine and physiological response divergence confer autotetraploid enhanced salt tolerance compared to its diploid Hordeum bulbosum Open
View article: Identification of QTL underlying the main stem related traits in a doubled haploid barley population
Identification of QTL underlying the main stem related traits in a doubled haploid barley population Open
Lodging reduces grain yield in cereal crops. The height, diameter and strength of stem are crucial for lodging resistance, grain yield, and photosynthate transport in barley. Understanding the genetic basis of stem benefits barley breeding…
View article: Responses of aroma related metabolic attributes of Opisthopappus longilobus flowers to environmental changes
Responses of aroma related metabolic attributes of Opisthopappus longilobus flowers to environmental changes Open
Various metabolic processes are activated in response to environmental changes. Opisthopappus longilobus ( Opisthopappus ) and its descendant species, Opisthopappus taihangensis commonly thrive on the Taihang Mountains of China. Being typi…
View article: Altitudinal Patterns in Adaptive Evolution of Genome Size and Inter-Genome Hybridization Between Three Elymus Species From the Qinghai–Tibetan Plateau
Altitudinal Patterns in Adaptive Evolution of Genome Size and Inter-Genome Hybridization Between Three Elymus Species From the Qinghai–Tibetan Plateau Open
Genome size variation and hybridization occur frequently within or between plant species under diverse environmental conditions, which enrich species diversification and drive the evolutionary process. Elymus L. is the largest genus in Tri…
View article: Adaptation insights from comparative transcriptome analysis of two Opisthopappus species in the Taihang mountains
Adaptation insights from comparative transcriptome analysis of two Opisthopappus species in the Taihang mountains Open
Opisthopappus is a major wild source of Asteraceae with resistance to cold and drought. Two species of this genus ( Opisthopappus taihangensis and O. longilobus ) have been employed as model systems to address the evolutionary history of p…
View article: Transcriptome and Metabolite Insights into Domestication Process of Cultivated Barley in China
Transcriptome and Metabolite Insights into Domestication Process of Cultivated Barley in China Open
The domestication process of cultivated barley in China remains under debate because of the controversial origins of barley. Here, we analyzed transcriptomic and non-targeted metabolic data from 29 accessions together with public resequenc…
View article: Assessment of soil quality for guided fertilization in 7 barley agro-ecological areas of China
Assessment of soil quality for guided fertilization in 7 barley agro-ecological areas of China Open
Soil quality is the basis for the development of sustainable agriculture and may be used for evaluating the sustainability of soil management practices. Soil quality status and integrated soil quality index (SQI) in sampled 97 farmlands di…
View article: Adaptation Insights from Comparative Transcriptome Analysis of Two Opisthopappus Species in the Taihang Mountains
Adaptation Insights from Comparative Transcriptome Analysis of Two Opisthopappus Species in the Taihang Mountains Open
Opisthopappus is a major wild source of Asteraceae with good cold and drought resistance. Two species of this genus ( Opisthopappus taihangensis and Opisthopappus longilobus ) have been employed as model systems to address the evolutionary…
View article: Variation in Plastome Sizes Accompanied by Evolutionary History in Monogenomic Triticeae (Poaceae: Triticeae)
Variation in Plastome Sizes Accompanied by Evolutionary History in Monogenomic Triticeae (Poaceae: Triticeae) Open
To investigate the pattern of chloroplast genome variation in Triticeae, we comprehensively analyzed the indels in protein-coding genes and intergenic sequence, gene loss/pseudonization, intron variation, expansion/contraction in inverted …
View article: Transcriptome and Metabolite Insights Into Domestication Process of Cultivated Barley in China
Transcriptome and Metabolite Insights Into Domestication Process of Cultivated Barley in China Open
Background Barley is one of the earliest domesticated crops and regarded as one of the founder of Neolithic transition in the Near East Fertile Crescent. Domestication process of cultivated barley (especially east-Asian cultivated barley) …
View article: Genome-Wide Identification of Triticum aestivum Xylanase Inhibitor Gene Family and Inhibitory Effects of XI-2 Subfamily Proteins on Fusarium graminearum GH11 Xylanase
Genome-Wide Identification of Triticum aestivum Xylanase Inhibitor Gene Family and Inhibitory Effects of XI-2 Subfamily Proteins on Fusarium graminearum GH11 Xylanase Open
Triticum aestivum xylanase inhibitor ( TaXI ) gene plays an important role in plant defense. Recently, TaXI–III inhibitor has been shown to play a dual role in wheat resistance to Fusarium graminearum infection. Thus, identifying the membe…
View article: Localized environmental heterogeneity drives the population differentiation of two endangered and endemic Opisthopappus Shih species
Localized environmental heterogeneity drives the population differentiation of two endangered and endemic Opisthopappus Shih species Open
View article: Demographic history and genetic differentiation of an endemic and endangered Ulmus lamellosa (Ulmus)
Demographic history and genetic differentiation of an endemic and endangered Ulmus lamellosa (Ulmus) Open
Background Ulmus lamellosa (one of the ancient species of Ulmus ) is an endemic and endangered plant that has undergone climatic oscillations and geographical changes. The elucidation of its demographic history and genetic differentiation …
View article: Clonal architectures and diversity spatial pattern of different ploidies for Clintonia udensis in the Hualongshan Mountains
Clonal architectures and diversity spatial pattern of different ploidies for Clintonia udensis in the Hualongshan Mountains Open
Clintonia udensis is a perennial herb possessing two cytotypes diploid (2n=14) and tetraploid (4n=28). In the Hualongshan Mountains, the diploid of C. udensis primarily grows in 2450 m areas on the south slopes, while the tetraploid grows …
View article: Population genetic variation characterization of the boreal tree Acer ginnala in Northern China
Population genetic variation characterization of the boreal tree Acer ginnala in Northern China Open
Genetic diversity and differentiation are revealed particularly through spatio-temporal environmental heterogeneity. Acer ginnala, as a deciduous shrub/small tree, is a foundation species in many terrestrial ecosystems of Northern China. O…
View article: Phylogenetic analysis of two single-copy nuclear genes revealed origin of tetraploid barley Hordeum marinum
Phylogenetic analysis of two single-copy nuclear genes revealed origin of tetraploid barley Hordeum marinum Open
Sea barley Hordeum marinum is an important germplasm resource. However, the origin of this tetraploid H. marinum subsp. gussoneanum is still unclear, which has caused great perplexity to the exploration and utilization of germplasm resourc…
View article: Insights into the N<sup>6</sup>-methyladenosine mechanism and its functionality: progress and questions
Insights into the N<sup>6</sup>-methyladenosine mechanism and its functionality: progress and questions Open
N6-methyladenosine (m6A) RNA methylation has become a progressively popular area of molecular research since the discovery of its potentially essential regulatory role amongst eukaryotes. m6A marks are observed in the 5’UTR, 3’U…