Siddhartha Datta Gupta
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View article: A Pan-Indian survey on the interpretation of intestinal biopsies in inflammatory bowel disease, and differentiating intestinal tuberculosis and Crohn’s disease from a pathologist’s perspective
A Pan-Indian survey on the interpretation of intestinal biopsies in inflammatory bowel disease, and differentiating intestinal tuberculosis and Crohn’s disease from a pathologist’s perspective Open
Background: The incidence of inflammatory bowel disease (IBD) is rising in India, particularly that of Crohn’s disease (CD). Histological examination is essential for disease evaluation. Materials and Methods: This national survey invited …
View article: Correlation between intestinal stem cell niche changes and small bowel crypt failure in patients with treatment-naïve celiac disease
Correlation between intestinal stem cell niche changes and small bowel crypt failure in patients with treatment-naïve celiac disease Open
Objectives: We hypothesized that crypt failure in the small bowel results in villous flattening in patients with celiac disease (CeD). We investigated whether alterations in the stem cell niche (ISC) are responsible for this phenomenon. Ma…
View article: Pancreatic Mass Characterization Using IVIM-DKI MRI and Machine Learning-Based Multi-Parametric Texture Analysis
Pancreatic Mass Characterization Using IVIM-DKI MRI and Machine Learning-Based Multi-Parametric Texture Analysis Open
Non-invasive characterization of pancreatic masses aids in the management of pancreatic lesions. Intravoxel incoherent motion-diffusion kurtosis imaging (IVIM-DKI) and machine learning-based texture analysis was used to differentiate pancr…
View article: Impact of Cytomegalovirus Infection on Short-Term Clinical Outcomes and Operative Histopathology in Infants with Biliary Atresia
Impact of Cytomegalovirus Infection on Short-Term Clinical Outcomes and Operative Histopathology in Infants with Biliary Atresia Open
Background: There is limited information on the impact of cytomegalovirus (CMV) infection on clinical outcomes and operative histopathology in children with biliary atresia (BA). We hypothesized that CMV infection is associated with greate…
View article: Expression analysis of oncogene transcript in human Aberrant Crypt foci, in comparison to the normal colonic mucosa and colorectal carcinoma from formalin-fixed paraffin-embedded tissue samples: A Pilot Study
Expression analysis of oncogene transcript in human Aberrant Crypt foci, in comparison to the normal colonic mucosa and colorectal carcinoma from formalin-fixed paraffin-embedded tissue samples: A Pilot Study Open
Purpose: Aberrant Crypt Foci (ACF) are microscopic preneoplastic lesions in human colon detectable by magnified chromoendoscopy. Our aim was to analyze the expression of a chosen gene transcript in harvested colonic ACF, corresponding colo…
View article: Erratum to ‘Indian National Association for the Study of Liver Consensus Statement on Acute Liver Failure (Part-2): Management of Acute Liver Failure’ [J Clin Exp Hepatol 10 (2020) 477-517]
Erratum to ‘Indian National Association for the Study of Liver Consensus Statement on Acute Liver Failure (Part-2): Management of Acute Liver Failure’ [J Clin Exp Hepatol 10 (2020) 477-517] Open
View article: Histologic Changes in Core-Needle Liver Biopsies From Patients With Acute-on-Chronic Liver Failure and Independent Histologic Predictors of 28-Day Mortality
Histologic Changes in Core-Needle Liver Biopsies From Patients With Acute-on-Chronic Liver Failure and Independent Histologic Predictors of 28-Day Mortality Open
Context.— The histologic features in patients with acute-on-chronic liver failure (ACLF) are evolving, and histologic indicators of patients' poor prognosis are not yet fully established. Objective.— To evaluate the independent histologic …
View article: Inhibition of the neuromuscular acetylcholine receptor with atracurium activates FOXO/DAF‐16‐induced longevity
Inhibition of the neuromuscular acetylcholine receptor with atracurium activates FOXO/DAF‐16‐induced longevity Open
Transcriptome‐based drug screening is emerging as a powerful tool to identify geroprotective compounds to intervene in age‐related disease. We hypothesized that, by mimicking the transcriptional signature of the highly conserved longevity …
View article: Long‐term outcomes of anti‐tumor necrosis factor therapy and surgery in nonperianal fistulizing Crohn's disease
Long‐term outcomes of anti‐tumor necrosis factor therapy and surgery in nonperianal fistulizing Crohn's disease Open
Background Unlike perianal fistula, long‐term outcomes of nonperianal fistulae (NPF) in Crohn's disease (CD) are not clear. We aimed to compare the outcomes of medical and surgical therapies in patients with NPF. Methods We retrospectively…
View article: Role of Whole body PET/CT and Examination under anesthesia with multi-site biopsy in evaluating CUP
Role of Whole body PET/CT and Examination under anesthesia with multi-site biopsy in evaluating CUP Open
View article: Indian National Association for the Study of the Liver Consensus Statement on Acute Liver Failure (Part 1): Epidemiology, Pathogenesis, Presentation and Prognosis
Indian National Association for the Study of the Liver Consensus Statement on Acute Liver Failure (Part 1): Epidemiology, Pathogenesis, Presentation and Prognosis Open
View article: Indian National Association for the Study of Liver Consensus Statement on Acute Liver Failure (Part-2): Management of Acute Liver Failure
Indian National Association for the Study of Liver Consensus Statement on Acute Liver Failure (Part-2): Management of Acute Liver Failure Open
View article: Rheology of complex fluids and kinematics of complex flows
Rheology of complex fluids and kinematics of complex flows Open
Complex fluids are key to commercial and biological applications, exhibiting diverse flow kinematics such as elongational flows, polymer-induced purely elastic instability, slip and shear banding. Accurate measurement of such complex flow …
View article: Holographic shear rheology of viscoelastic fluids
Holographic shear rheology of viscoelastic fluids Open
In this study, we report the use of digital holography microscopy (DHM) for 3D-resolved flow kinematics and shear rheometry of viscoelastic polymeric fluids. We computationally reconstruct the recorded holograms to visualize the tracer imb…
View article: 2019 Update of Indian National Association for Study of the Liver Consensus on Prevention, Diagnosis, and Management of Hepatocellular Carcinoma in India: The Puri II Recommendations
2019 Update of Indian National Association for Study of the Liver Consensus on Prevention, Diagnosis, and Management of Hepatocellular Carcinoma in India: The Puri II Recommendations Open
View article: Sa1530 – Celiac Disease Associated Liver Dysfunction: Study of the Histological Features and Co-Localisation Patterns of Iga and Igg Anti-Tissue Transglutaminase Antibody in Liver Biopsies
Sa1530 – Celiac Disease Associated Liver Dysfunction: Study of the Histological Features and Co-Localisation Patterns of Iga and Igg Anti-Tissue Transglutaminase Antibody in Liver Biopsies Open
View article: Quantitative histology-based classification system for assessment of the intestinal mucosal histological changes in patients with celiac disease
Quantitative histology-based classification system for assessment of the intestinal mucosal histological changes in patients with celiac disease Open
Quantitative assessment increases the reliability of the histological assessment of mucosal biopsies in patients with CeD. Such a classification system may be used for clinical trials in patients with CeD. (Intest Res, Published online).
View article: Detection of Solitary Axillary Lymph Node Metastases from Hürthle Cell Carcinoma of the Thyroid on 18F-FDG PET/CT
Detection of Solitary Axillary Lymph Node Metastases from Hürthle Cell Carcinoma of the Thyroid on 18F-FDG PET/CT Open
View article: Objective Scoring of Extent of Steatosis and Fibrosis Using Computer Assisted Image Analysis System in Liver Biopsy Of Non-alcoholic steatohepatitis Patients
Objective Scoring of Extent of Steatosis and Fibrosis Using Computer Assisted Image Analysis System in Liver Biopsy Of Non-alcoholic steatohepatitis Patients Open
Background: The histological grading/staging system for Non-alcoholic steatohepatitis (NASH) encompasses the following criteria: extent of steatosis, lobular-inflammation, ballooning hepatocytes and extent of fibrosis. The existing scoring…
View article: Modification and Assessment of a Residential Summer Program for High School Women
Modification and Assessment of a Residential Summer Program for High School Women Open
The importance of reducing the gender gap in engineering programs by recruiting and retaining female students is well recognized. Although women hold roughly half of all jobs in the United States, only 24% of STEM jobs are occupied by wome…
View article: Modification and Assessment of a Residential Summer Program for High School Women (Evaluation)
Modification and Assessment of a Residential Summer Program for High School Women (Evaluation) Open
Modification and Assessment of a Residential Summer Program for High School Women (Evaluation) The importance of reducing the gender gap in engineering programs by recruiting and retaining female students is well recognized. Although women…
View article: Acute Traumatic Endotheliopathy in Isolated Severe Brain Injury and Its Impact on Clinical Outcome
Acute Traumatic Endotheliopathy in Isolated Severe Brain Injury and Its Impact on Clinical Outcome Open
Study design: Prospective observational cohort. Objective: To investigate the difference in plasma levels of syndecan-1 (due to glycocalyx degradation) and soluble thrombomodulin (due to endothelial damage) in isolated severe traumatic bra…
View article: Selective M1 macrophage polarization in granuloma-positive and granuloma-negative Crohn's disease, in comparison to intestinal tuberculosis
Selective M1 macrophage polarization in granuloma-positive and granuloma-negative Crohn's disease, in comparison to intestinal tuberculosis Open
Proinflammatory M1φ polarization was more common in colonic mucosa of CD patients, especially in the presence of mucosal granulomas. Further characterization of the innate immune system could help in clarifying the pathology of …
View article: Topographic, histological and molecular study of aberrant crypt foci identified in human colon in different clinical groups
Topographic, histological and molecular study of aberrant crypt foci identified in human colon in different clinical groups Open
Left colonic ACF appear to be high-risk based on their morphological and prototypic tumor marker signature. ACF identified in different clinical groups do not show significant genotypic or topographic differences. Further detailed genetic …
View article: Cathepsin L and B as Potential Markers for Liver Fibrosis: Insights From Patients and Experimental Models
Cathepsin L and B as Potential Markers for Liver Fibrosis: Insights From Patients and Experimental Models Open
Our data demonstrate the overexpression of CTSL and CTSB in patients and experimental mouse models, suggesting their potential as diagnostic biomarkers for chronic liver diseases.
View article: Microfluidic viscometers for shear rheology of complex fluids and biofluids
Microfluidic viscometers for shear rheology of complex fluids and biofluids Open
The rich diversity of man-made complex fluids and naturally occurring biofluids is opening up new opportunities for investigating their flow behavior and characterizing their rheological properties. Steady shear viscosity is undoubtedly th…
View article: Proteome analysis of the macroscopically affected colonic mucosa of Crohn’s disease and intestinal tuberculosis
Proteome analysis of the macroscopically affected colonic mucosa of Crohn’s disease and intestinal tuberculosis Open
View article: Demographic profile, host, disease & viral predictive factors of response in patients with chronic hepatitis C virus infection at a tertiary care hospital in north India
Demographic profile, host, disease & viral predictive factors of response in patients with chronic hepatitis C virus infection at a tertiary care hospital in north India Open
Background & objectives: Standard of care for chronic hepatitis C (CHC) in India is peginterferon and ribavirin (RBV). The response to treatment in real life stetting is unclear. The objectives of this study were to evaluate the demographi…
View article: Cancer stem cells in hepatocellular carcinomas
Cancer stem cells in hepatocellular carcinomas Open
There are currently two major schools of thought or theories that explain the formation of tumours. According to the classical stochastic theory or clonal-evolution model of carcinogenesis, it is believed that a cancer cell develops as a r…
View article: Correlation of pre- and post-operative liver function, duct diameter at porta hepatis, and portal fibrosis with surgical outcomes in biliary atresia
Correlation of pre- and post-operative liver function, duct diameter at porta hepatis, and portal fibrosis with surgical outcomes in biliary atresia Open
Following KP, jaundice persisted in 40% patients; it disappeared in 60% patients but reappeared in half of these patients 6 months postoperatively. The duct size at the porta hepatis did not correlate with age or surgical outcome. Serum bi…