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View article: Author response of: Simulating transgenerational hologenomes under selection with RITHMS. Round#2
Author response of: Simulating transgenerational hologenomes under selection with RITHMS. Round#2 Open
View article: Resource acquisition and allocation trade-offs and the link to genetic correlation between traits in agriculture
Resource acquisition and allocation trade-offs and the link to genetic correlation between traits in agriculture Open
View article: Transmissibility model to evaluate transgenerational transmission of environmental effects in quails
Transmissibility model to evaluate transgenerational transmission of environmental effects in quails Open
Both genetic and non-genetic information, which contribute to the development of phenotypes, can be transmitted across generations. Non-genetic information can be modified by the environment, allowing environmental effects to be transmitte…
View article: An advanced stochastic framework for the simulation of transgenerational hologenomic data
An advanced stochastic framework for the simulation of transgenerational hologenomic data Open
International audience
View article: Transmission of an environmental modification in quails across three generations: changes in phenotypic variance components
Transmission of an environmental modification in quails across three generations: changes in phenotypic variance components Open
While epigenetic variations can contribute to shaping phenotypic diversity, it can be challenging to isolate and quantify the portion of trait variability under epigenetic influence. In this study we compared the phenotypic responses for d…
View article: Feeding Behaviour in Group-Housed Growing-Finishing Pigs and Its Relationship with Growth and Feed Efficiency
Feeding Behaviour in Group-Housed Growing-Finishing Pigs and Its Relationship with Growth and Feed Efficiency Open
Feed consumption and feeding patterns influence the individual feed efficiency in group-housed livestock species. Using the meal as the unit of feeding behaviour, the main objectives of this research were to identify feeding behaviour (FB)…
View article: RITHMS : An advanced stochastic framework for the simulation of transgenerational hologenomic data
RITHMS : An advanced stochastic framework for the simulation of transgenerational hologenomic data Open
A holobiont is made up of a host organism together with its microbiota. In the context of animal breeding, as the holobiont can be viewed as the single unit upon which selection operates, integrating microbiota data into genomic prediction…
View article: Classifying active and inactive states of growing rabbits from accelerometer data using machine learning algorithms
Classifying active and inactive states of growing rabbits from accelerometer data using machine learning algorithms Open
Using wearable accelerometers is gaining traction in research and animal production management for monitoring animal behaviour. In this study, the objective was to automatically detect rabbit activity/inactivity states from accelerometer d…
View article: Primiparous sow behaviour on the day of farrowing as one of the primary contributors to the growth of piglets in early lactation
Primiparous sow behaviour on the day of farrowing as one of the primary contributors to the growth of piglets in early lactation Open
Large White and Meishan sows differ in maternal ability and early piglet growth. We investigated the relationships between 100 maternal traits, grouped into 11 blocks according to the biological function they describe and litter growth ove…
View article: Genetic parameters of feeding behaviour traits in ducks bred for foie gras production
Genetic parameters of feeding behaviour traits in ducks bred for foie gras production Open
View article: Classifying active and inactive states of growing rabbits from accelerometer data using machine learning algorithms
Classifying active and inactive states of growing rabbits from accelerometer data using machine learning algorithms Open
This study explores how wearable accelerometers, small devices that measure acceleration, can help monitor the activity of growing rabbits. We equipped 16 rabbits with these devices and filmed them for two weeks. By watching the videos and…
View article: Sow behavior on the day of farrowing: The main determinant of early piglet growth among maternal ability traits
Sow behavior on the day of farrowing: The main determinant of early piglet growth among maternal ability traits Open
Large White and Meishan sows differ in maternal ability and early piglet growth. We investigated the relationships between piglet growth over three periods after birth (D0-D1, D1-D3 and D3-D7; D0 starting at the onset of farrowing) and 101…
View article: Integrating computer vision algorithms and RFID system for identification and tracking of group-housed animals: an example with pigs
Integrating computer vision algorithms and RFID system for identification and tracking of group-housed animals: an example with pigs Open
Precision livestock farming aims to individually and automatically monitor animal activity to ensure their health, well-being, and productivity. Computer vision has emerged as a promising tool for this purpose. However, accurately tracking…
View article: Identification and characterization of unknown disturbances in a structured population using high-throughput phenotyping data and measurement of robustness: application to growing pigs
Identification and characterization of unknown disturbances in a structured population using high-throughput phenotyping data and measurement of robustness: application to growing pigs Open
Improving the robustness of animals has become a priority in breeding due to climate change, new societal demands, and the agroecological transition. Components of animal robustness can be extracted from the analysis of the adaptive respon…
View article: Classifying Active and Inactive States of Growing Rabbits from Accelerometer Data Using Machine Learning Algorithms
Classifying Active and Inactive States of Growing Rabbits from Accelerometer Data Using Machine Learning Algorithms Open
View article: Epigénétique, gènes et environnement : quelle importance pour les pratiques d’élevage et les méthodes de sélection des volailles ?
Epigénétique, gènes et environnement : quelle importance pour les pratiques d’élevage et les méthodes de sélection des volailles ? Open
L'épigénétique est communément définie comme l’étude de l'ensemble des mécanismes moléculaires impliqués dans la régulation de l’expression des gènes qui sont réversibles et transmissibles au cours du développement et parfois entre générat…
View article: Disentangling the dynamics of energy allocation to develop a proxy for robustness of fattening pigs
Disentangling the dynamics of energy allocation to develop a proxy for robustness of fattening pigs Open
View article: UpDown -An R Package to Identify and Characterize Disturbances from Longitudinal Observations
UpDown -An R Package to Identify and Characterize Disturbances from Longitudinal Observations Open
The R package UpDown provides an algorithm to detect and characterize (start, end dates, intensity) disturbances that can occur at different hierarchical levels by studying the dynamics of longitudinal observations at individual and group …
View article: An improved transmissibility model to detect transgenerational transmitted environmental effects
An improved transmissibility model to detect transgenerational transmitted environmental effects Open
View article: UpDown -an R Package to characterize unknown disturbances from longitudinal observations
UpDown -an R Package to characterize unknown disturbances from longitudinal observations Open
International audience
View article: 11. Prediction of the activity pattern of lactating sows by image analysis, and relations with piglet survival and growth
11. Prediction of the activity pattern of lactating sows by image analysis, and relations with piglet survival and growth Open
View article: Sow activity patterns elaborated from computer vision data are associated with piglet growth in early lactation
Sow activity patterns elaborated from computer vision data are associated with piglet growth in early lactation Open
International audience
View article: UpDown, une méthodologie d'identification et de caractérisation de perturbations affectant des données longitudinales
UpDown, une méthodologie d'identification et de caractérisation de perturbations affectant des données longitudinales Open
International audience
View article: Analysis of image-based sow activity patterns reveals several associations with piglet survival and early growth
Analysis of image-based sow activity patterns reveals several associations with piglet survival and early growth Open
An activity pattern describes variations in activities over time. The objectives of this study are to automatically predict sow activity from computer vision over 11 days peripartum and estimate how sow behavior influences piglet's perform…
View article: Sheep and rabbits experimental facility
Sheep and rabbits experimental facility Open
International audience
View article: Disentangling the dynamics of energy allocation to provide a proxy of robustness in fattening pigs
Disentangling the dynamics of energy allocation to provide a proxy of robustness in fattening pigs Open
Background There is a growing need to improve robustness characteristics in fattening pigs, but this trait is difficult to phenotype. Our first objective was to develop a robustness proxy on the basis of modelling of longitudinal energetic…
View article: Genetic improvement of resilience in laying hens: promising traits
Genetic improvement of resilience in laying hens: promising traits Open
View article: Epigenetics at the interface between environment and DNA: what importance for breeding practices and selection methods?
Epigenetics at the interface between environment and DNA: what importance for breeding practices and selection methods? Open
View article: Analysis of the causal structure of traits involved in sow lactation feed efficiency
Analysis of the causal structure of traits involved in sow lactation feed efficiency Open
View article: Towards the characterisation of animal robustness by dynamic energy allocation indicators in fattening pigs
Towards the characterisation of animal robustness by dynamic energy allocation indicators in fattening pigs Open
International audience