Isabelle Ewers
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View article: Investigating the dynamics of the aquatic community in Oslofjord through time series analysis of <scp>eDNA</scp>
Investigating the dynamics of the aquatic community in Oslofjord through time series analysis of <span>eDNA</span> Open
Understanding the temporal dynamics of marine communities is critical for assessing ecosystem health and guiding conservation efforts. Here, we conducted a survey using environmental DNA (eDNA) metabarcoding with two primer sets, MiFish an…
View article: Interpreting phylogenetic placements for taxonomic assignment of environmental <scp>DNA</scp>
Interpreting phylogenetic placements for taxonomic assignment of environmental <span>DNA</span> Open
Taxonomic assignment of operational taxonomic units (OTUs) is an important bioinformatics step in analyzing environmental sequencing data. Pairwise alignment and phylogenetic‐placement methods represent two alternative approaches to taxono…
View article: Comparison of phylogenetic placements to pairwise alignments for taxonomic assignment of ciliate OTUs
Comparison of phylogenetic placements to pairwise alignments for taxonomic assignment of ciliate OTUs Open
Taxonomic assignment of OTUs is an important bioinformatics step in analyzing environmental sequencing data. Pairwise-alignment and phylogenetic-placement methods represent two alternative approaches to taxonomic assignments, but their res…