Jan T. Kim
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View article: Phylogenomics and the rise of the angiosperms
Phylogenomics and the rise of the angiosperms Open
View article: Taming the beast: a revised classification of Cortinariaceae based on genomic data
Taming the beast: a revised classification of Cortinariaceae based on genomic data Open
View article: A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life
A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life Open
The tree of life is the fundamental biological roadmap for navigating the evolution and properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering plants) are fraught with data gaps, despite their critical ro…
View article: A comprehensive phylogenomic platform for exploring the angiosperm Tree of Life
A comprehensive phylogenomic platform for exploring the angiosperm Tree of Life Open
The tree of life is the fundamental biological roadmap for navigating the evolution and properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering plants) are fraught with data gaps, despite their critical ro…
View article: A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life
A Comprehensive Phylogenomic Platform for Exploring the Angiosperm Tree of Life Open
The tree of life is the fundamental biological roadmap for navigating the evolution and properties of life on Earth, and yet remains largely unknown. Even angiosperms (flowering plants) are fraught with data gaps, despite their critical ro…
View article: Hyb-Seq for Flowering Plant Systematics
Hyb-Seq for Flowering Plant Systematics Open
View article: A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-Medoids Clustering Open
Sequencing of target-enriched libraries is an efficient and cost-effective method for obtaining DNA sequence data from hundreds of nuclear loci for phylogeny reconstruction. Much of the cost of developing targeted sequencing approaches is …
View article: A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-medoids Clustering
A Universal Probe Set for Targeted Sequencing of 353 Nuclear Genes from Any Flowering Plant Designed Using k-medoids Clustering Open
Sequencing of target-enriched libraries is an efficient and cost-effective method for obtaining DNA sequence data from hundreds of nuclear loci for phylogeny reconstruction. Much of the cost associated with developing targeted sequencing a…
View article: A roadmap for global synthesis of the plant tree of life
A roadmap for global synthesis of the plant tree of life Open
Providing science and society with an integrated, up‐to‐date, high quality, open, reproducible and sustainable plant tree of life would be a huge service that is now coming within reach. However, synthesizing the growing body of DNA sequen…
View article: Determining Phenological Patterns Associated with the Onset of Senescence in a Wheat MAGIC Mapping Population
Determining Phenological Patterns Associated with the Onset of Senescence in a Wheat MAGIC Mapping Population Open
The appropriate timing of developmental transitions is critical for adapting many crops to their local climatic conditions. Therefore, understanding the genetic basis of different aspects of phenology could be useful in highlighting mechan…
View article: Software Carpentry: The Unix Shell
Software Carpentry: The Unix Shell Open
A half-day introduction to automating tasks with the Unix shell for researchers, developed and maintained by the Software Carpentry team.
View article: The impact of within-herd genetic variation upon inferred transmission trees for foot-and-mouth disease virus
The impact of within-herd genetic variation upon inferred transmission trees for foot-and-mouth disease virus Open
Full-genome sequences have been used to monitor the fine-scale dynamics of epidemics caused by RNA viruses. However, the ability of this approach to confidently reconstruct transmission trees is limited by the knowledge of the genetic dive…