Ying‐Chung Jimmy Lin
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View article: Haplotype‐Resolved Genome Assembly and Population Genomics Reveal Evolutionary History and Agronomic Traits of Mulberry
Haplotype‐Resolved Genome Assembly and Population Genomics Reveal Evolutionary History and Agronomic Traits of Mulberry Open
Mulberry is a representative economic tree species valued for both poverty alleviation and medicinal use. To advance the understanding of mulberry genomics and demography, we assembled high‐quality haploid genomes of two widely cultivated …
View article: Outside Front Cover Image
Outside Front Cover Image Open
View article: Transcriptomic analysis of peaches and nectarines reveals alternative mechanism for trichome formation
Transcriptomic analysis of peaches and nectarines reveals alternative mechanism for trichome formation Open
View article: Woody plant cell walls: Fundamentals and utilization
Woody plant cell walls: Fundamentals and utilization Open
View article: Lignocellulose degradation in bacteria and fungi: cellulosomes and industrial relevance
Lignocellulose degradation in bacteria and fungi: cellulosomes and industrial relevance Open
Lignocellulose biomass is one of the most abundant resources for sustainable biofuels. However, scaling up the biomass-to-biofuels conversion process for widespread usage is still pending. One of the main bottlenecks is the high cost of en…
View article: Living xylem cells encode a large number of conserved gene families responsible for vascular sap peptides
Living xylem cells encode a large number of conserved gene families responsible for vascular sap peptides Open
Plant long-distance signaling peptides travel through the vascular system to coordinate development and respond to environmental cues, yet their precursor genes and expression origins remain elusive. We characterized 4,804 sap peptide prec…
View article: Lignocellulose Degradation in Bacteria and Fungi for Biomass Conversion
Lignocellulose Degradation in Bacteria and Fungi for Biomass Conversion Open
Lignocellulose biomass is one of the most abundant resources for sustainable biofuels. However, scaling up the biomass-to-biofuels conversion process for widespread usage is still pending. Bottlenecks during the process of enzymatic hydrol…
View article: Evolutionary conserved sap peptides derived from xylem-specific peptide precursors in woody angiosperms
Evolutionary conserved sap peptides derived from xylem-specific peptide precursors in woody angiosperms Open
Peptides act as long-distance mobile signals, transported through vascular sap to coordinate complex developmental processes. Since the tissue-specificity of peptide precursor gene expression is critical in determining peptide signaling fu…
View article: An acidophilic fungus promotes prey digestion in a carnivorous plant
An acidophilic fungus promotes prey digestion in a carnivorous plant Open
Leaves of the carnivorous sundew plants ( Drosera spp.) secrete mucilage that hosts microorganisms, but whether this microbiota contributes to prey digestion is unclear. We identified the acidophilic fungus Acrodontium crateriforme as the …
View article: A Sap Peptide Conserved across Flowering Plants Positively Regulates Lignin Biosynthesis, Biomass and Immunity
A Sap Peptide Conserved across Flowering Plants Positively Regulates Lignin Biosynthesis, Biomass and Immunity Open
Signaling peptides act as hormones to deliver short- or long-distance intercellular signals to govern complex developmental processes. Identifying endogenous signaling peptides is challenging due to their low abundance and the unknown clea…
View article: Woody plant cell walls: Fundamentals and utilization
Woody plant cell walls: Fundamentals and utilization Open
View article: An acidophilic fungus is integral to prey digestion in a carnivorous plant
An acidophilic fungus is integral to prey digestion in a carnivorous plant Open
Carnivorous plant leaves, such as those of the spoon-leaved sundew Drosera spatulata , secrete mucilage which hosts microorganisms potentially aiding in prey digestion. We characterised the mucilage microbial communities and identified the…
View article: Exogenous application of melatonin activates secondary cell wall biosynthetic genes and increases stem thickness in Glycine max
Exogenous application of melatonin activates secondary cell wall biosynthetic genes and increases stem thickness in Glycine max Open
Plant lodging severely reduced crop yield and quality. Different plant growth regulators (PGRs) have been applied to improve lodging resistance through the regulation of physiological changes, especially on the increase of stem thickness a…
View article: Cell-type-specific PtrWOX4a and PtrVCS2 form a regulatory nexus with a histone modification system for stem cambium development in Populus trichocarpa
Cell-type-specific PtrWOX4a and PtrVCS2 form a regulatory nexus with a histone modification system for stem cambium development in Populus trichocarpa Open
View article: Development of a petal protoplast transfection system for <i>Sinningia speciosa</i>
Development of a petal protoplast transfection system for <i>Sinningia speciosa</i> Open
Premise Transient gene expression systems are powerful tools for studying gene interactions in plant species without available or stable genetic transformation protocols. We optimized a petal protoplast transformation protocol for Sinningi…
View article: The 24-chain core-shell nanostructure of wood cellulose microfibrils in seed plants
The 24-chain core-shell nanostructure of wood cellulose microfibrils in seed plants Open
Wood cellulose microfibrils (CMFs) are the most abundant organic substance on earth, but their nanostructures are poorly understood. There are controversies regarding the glucan chain number ( N ) of CMFs during initial synthesis and wheth…
View article: A PtrLBD39-mediated transcriptional network regulates tension wood formation in Populus trichocarpa
A PtrLBD39-mediated transcriptional network regulates tension wood formation in Populus trichocarpa Open
View article: Single-cell transcriptomics unveils xylem cell development and evolution
Single-cell transcriptomics unveils xylem cell development and evolution Open
As the most abundant tissue on Earth 1 , xylem is responsible for lateral growth in plants. Typical xylem has a radial system composed of ray parenchyma cells and an axial system of fusiform cells 2 . In most angiosperms, fusiform cells ar…
View article: Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa
Enzyme Complexes of Ptr4CL and PtrHCT Modulate Co-enzyme A Ligation of Hydroxycinnamic Acids for Monolignol Biosynthesis in Populus trichocarpa Open
Co-enzyme A (CoA) ligation of hydroxycinnamic acids by 4-coumaric acid:CoA ligase (4CL) is a critical step in the biosynthesis of monolignols. Perturbation of 4CL activity significantly impacts the lignin content of diverse plant species. …
View article: Additional file 5 of Large-scale data analysis for robotic yeast one-hybrid platforms and multi-disciplinary studies using GateMultiplex
Additional file 5 of Large-scale data analysis for robotic yeast one-hybrid platforms and multi-disciplinary studies using GateMultiplex Open
Additional file 5. Dataset. Real experimental results of the four fields to demonstrate the operation of GateMultiplex.