Jingjie Hu
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View article: Genome-wide investigation of the dmrt gene family reveals new insight into the gonad development in Plectropomus leopardus: dmrt2a regulate the development of oocytes
Genome-wide investigation of the dmrt gene family reveals new insight into the gonad development in Plectropomus leopardus: dmrt2a regulate the development of oocytes Open
Background Plectropomus leopardus is a hermaphrodite fish with a unique pattern of gonadal development. However, the molecular mechanism of sexual differentiation in this species remains unclear. The Doublesex and Mab-3 related transcripti…
View article: A draft genome assembly of the mushroom coral Podabacia crustacea (Pallas, 1766)
A draft genome assembly of the mushroom coral Podabacia crustacea (Pallas, 1766) Open
Coral reefs are facing significant environmental changes that greatly impact biodiversity, including species such as the widely distributed coral Podabacia. In particular, Podabacia crustacea is notable for its high abundance and broad dis…
View article: Re-annotation improved large-scale assembly of the reef-building coral Acropora intermedia
Re-annotation improved large-scale assembly of the reef-building coral Acropora intermedia Open
Acropora corals, primary reef-builders providing habitat for numerous marine species, now face novel survival pressures due to environmental changes. Acropora intermedia (Brook 1891), a significant contributor to the vibrant ecosystems of …
View article: Automated underwater plectropomus leopardus phenotype measurement through cylinder
Automated underwater plectropomus leopardus phenotype measurement through cylinder Open
Accurate and non-invasive measurement of fish phenotypic characteristics in underwater environments is crucial for advancing aquaculture. Traditional manual methods require significant labor to anesthetize and capture fish, which not only …
View article: Complete mitochondrial genome and phylogenetic analysis of <i>Podabacia crustacea</i> (Pallas, 1766)
Complete mitochondrial genome and phylogenetic analysis of <i>Podabacia crustacea</i> (Pallas, 1766) Open
The coral genus Podabacia serves as a bioindicator of offshore environments. This study presents an updated complete mitochondrial genome of Podabacia crustacea (Pallas, 1766). The final mitogenome spans 17,009 bp in length a…
View article: Complete mitochondrial genome of the brain coral <i>Platygyra daedalea</i> (Ellis & Solander, 1786)
Complete mitochondrial genome of the brain coral <i>Platygyra daedalea</i> (Ellis & Solander, 1786) Open
Platygyra daedalea Ellis & Solander, 1786, is a dominant species within the world's warmest reefs, making it a critical model for investigating coral stress resistance and adaptive evolutionary mechanisms. This study presents the fi…
View article: Single-cell transcriptomic dynamics of scallop heart reveals the heterogeneous response to heat stress
Single-cell transcriptomic dynamics of scallop heart reveals the heterogeneous response to heat stress Open
Background Animals with open circulatory systems are highly vulnerable to environmental temperature fluctuations, making them particularly threatened by global warming. However, research on the cellular heterogeneity of heart responses to …
View article: High-quality genome assembly of the azooxanthellate coral Tubastraea coccinea (Lesson, 1829)
High-quality genome assembly of the azooxanthellate coral Tubastraea coccinea (Lesson, 1829) Open
Coral reefs are among the most biodiverse and economically significant ecosystems globally, yet they are increasingly degrading due to global climate change and local human activities. The sun coral Tubastraea coccinea (T. coccinea) an obl…
View article: PLDNet: real-time Plectropomus leopardus disease recognition
PLDNet: real-time Plectropomus leopardus disease recognition Open
In Plectropomus leopardus , Vibrio disease and Hirudo parasitic disease are relatively common. Timely recognition of these diseases can improve the survival rate of Plectropomus leopardus and prevent their spread. However, early-stage dise…
View article: The Effects of Acute Temperature Changes on Transcriptomic Responses in the Liver of Leopard Coral Groupers (Plectropomus leopardus)
The Effects of Acute Temperature Changes on Transcriptomic Responses in the Liver of Leopard Coral Groupers (Plectropomus leopardus) Open
The leopard coral grouper (Plectropomus leopardus) is a commercially significant tropical marine species. With the ongoing effects of global climate change, increasing attention has been focused on leopard coral grouper’s susceptibility to…
View article: Hepatic and intestinal insights into the molecular mechanisms of dietary Antarctic krill-induced body color differentiation in Plectropomus leopardus
Hepatic and intestinal insights into the molecular mechanisms of dietary Antarctic krill-induced body color differentiation in Plectropomus leopardus Open
Antarctic krill (Euphausia superba), which is rich in astaxanthin, has been widely utilized as a dietary supplement in fish aquaculture. Our study was to feed juvenile leopard coral grouper (Plectropomus leopardus) a diet containing 50 % A…
View article: The DnaJ-Hsp70-Hsp90 co-chaperon networks in scallops under toxic Alexandrium dinoflagellates exposure
The DnaJ-Hsp70-Hsp90 co-chaperon networks in scallops under toxic Alexandrium dinoflagellates exposure Open
Heat shock proteins (Hsps) are highly conserved molecular chaperones with essential roles against biotic and abiotic stressors. A large set of co-chaperons comprising J-domain proteins (DnaJs) regulate the ATPase cycle of Hsp70s with Hsp90…
View article: Effects of Body Weight, Temperature, and Daily Time Periods on Oxygen Consumption Rate of Juvenile Silver Pomfret (<i>Pampus argenteus</i>)
Effects of Body Weight, Temperature, and Daily Time Periods on Oxygen Consumption Rate of Juvenile Silver Pomfret (<i>Pampus argenteus</i>) Open
Oxygen consumption rate (OCR), which reflects the metabolism requirement of fish, is regulated by body weight and temperature. However, the priority of body weight and temperature in determining the OCR of fish is not clear. The optimal te…
View article: Deciphering the genetic basis of sex differentiation in silver-lipped pearl oyster (<i>Pinctada maxima</i>) based on integrative transcriptomic analysis
Deciphering the genetic basis of sex differentiation in silver-lipped pearl oyster (<i>Pinctada maxima</i>) based on integrative transcriptomic analysis Open
The silver-lipped pearl oyster ( Pinctada maxima) is the largest and most commercially valuable pearl-producing oyster, renowned for its ability to generate large, lustrous pearls. This species is a sequential hermaphrodite, with pe…
View article: Effects of cold stress on the blood-brain barrier in Plectropomus leopardus
Effects of cold stress on the blood-brain barrier in Plectropomus leopardus Open
View article: The relationship between future time perspective and suicide ideation in college students: Multiple mediating effects of anxiety and depression
The relationship between future time perspective and suicide ideation in college students: Multiple mediating effects of anxiety and depression Open
View article: Advancing selective breeding in leopard coral grouper (P. leopardus) through development of a high-throughput image-based growth trait
Advancing selective breeding in leopard coral grouper (P. leopardus) through development of a high-throughput image-based growth trait Open
Utilizing image-based computer vision techniques, many high-throughput phenotyping methods have been employed to capture intricate growth trait characteristics, offering reliable estimates of phenotypic traits crucial for breeding programs…
View article: Characterization and Functional Analysis of Fads Reveals Δ5 Desaturation Activity during Long-Chain Polyunsaturated Fatty Acid Biosynthesis in Dwarf Surf Clam Mulinia lateralis
Characterization and Functional Analysis of Fads Reveals Δ5 Desaturation Activity during Long-Chain Polyunsaturated Fatty Acid Biosynthesis in Dwarf Surf Clam Mulinia lateralis Open
Fatty acid desaturases (Fads), as key enzymes in the biosynthesis of long-chain polyunsaturated fatty acids (LC-PUFAs), catalyze the desaturation between defined carbons of fatty acyl chains and control the degree of unsaturation of fatty …
View article: Dietary antarctic krill improves antioxidant capacity, immunity and reduces lipid accumulation, insights from physiological and transcriptomic analysis of Plectropomus leopardus
Dietary antarctic krill improves antioxidant capacity, immunity and reduces lipid accumulation, insights from physiological and transcriptomic analysis of Plectropomus leopardus Open
Background Due to its enormous biomass, Antarctic krill ( Euphausia superba ) plays a crucial role in the Antarctic Ocean ecosystem. In recent years, Antarctic krill has found extensive application in aquaculture, emerging as a sustainable…
View article: Theoretical Analysis and Expression Profiling of 17β-Hydroxysteroid Dehydrogenase Genes in Gonadal Development and Steroidogenesis of Leopard Coral Grouper (Plectropomus leopardus)
Theoretical Analysis and Expression Profiling of 17β-Hydroxysteroid Dehydrogenase Genes in Gonadal Development and Steroidogenesis of Leopard Coral Grouper (Plectropomus leopardus) Open
The differentiation and developmental trajectory of fish gonads, significantly important for fish breeding, culture, and production, has long been a focal point in the fields of fish genetics and developmental biology. However, the mechani…
View article: Signatures of selection in <i>Mulinia lateralis</i> underpinning its rapid adaptation to laboratory conditions
Signatures of selection in <i>Mulinia lateralis</i> underpinning its rapid adaptation to laboratory conditions Open
The dwarf surf clam, Mulinia lateralis , is considered as a model species for bivalves because of its rapid growth and short generation time. Recently, successful breeding of this species for multiple generations in our laboratory revealed…
View article: Ampk-Mediated Regulation of Cardiac Energy Metabolism: Implications for Thermotolerance in Argopecten Irradians Irradians
Ampk-Mediated Regulation of Cardiac Energy Metabolism: Implications for Thermotolerance in Argopecten Irradians Irradians Open
View article: Effects Of Body Weight, Temperature and Daily Time Periods On Oxygen Consumption Rate Of Juvenile Silver Pomfret ( Pampus Argenteus )
Effects Of Body Weight, Temperature and Daily Time Periods On Oxygen Consumption Rate Of Juvenile Silver Pomfret ( Pampus Argenteus ) Open
View article: Characterization and Preliminary Application of a Novel Lytic Vibrio parahaemolyticus Bacteriophage vB_VpaP_SJSY21
Characterization and Preliminary Application of a Novel Lytic Vibrio parahaemolyticus Bacteriophage vB_VpaP_SJSY21 Open
Litopenaeus vannamei is one of the most economically significant aquatic species globally. However, the emergence of acute hepatopancreatic necrosis disease (AHPND) in recent years has resulted in substantial losses within the L. vannamei …
View article: Transcriptome and network analyses reveal key pathways and genes involved in response to carotenoid deposition in scallop muscle
Transcriptome and network analyses reveal key pathways and genes involved in response to carotenoid deposition in scallop muscle Open
Carotenoids are essential nutrients for humans and animals, and carotenoid content has become an important trait to evaluate the nutritional value of many cultured animals. Marine animals provide humans with diverse carotenoids, and develo…
View article: Enlarged Perivascular Spaces and Swallow Dysfunction after Acute Ischemic Stroke
Enlarged Perivascular Spaces and Swallow Dysfunction after Acute Ischemic Stroke Open
Background Post-stroke dysphagia (PSD) is a severe complication of stroke. Cerebral small-vessel disease (CSVD) is a major risk factor for stroke and is associated with swallowing difficulties. Accumulating evidence suggests that enlarged …
View article: Improved chromosomal-level genome assembly and re-annotation of leopard coral grouper
Improved chromosomal-level genome assembly and re-annotation of leopard coral grouper Open
View article: A new non-invasive tagging method for leopard coral grouper (Plectropomus leopardus) using deep convolutional neural networks with PDE-based image decomposition
A new non-invasive tagging method for leopard coral grouper (Plectropomus leopardus) using deep convolutional neural networks with PDE-based image decomposition Open
External tagging methods can aid in the research of leopard coral grouper ( Plectropomus leopardus ) in terms of its spatio-temporal behavior at population and individual scales. However, due to the strong exclusion ability and the damage …
View article: Erratum to “Targeted Genotyping of a Whole-Gene Repertoire by an Ultrahigh-Multiplex and Flexible HD-Marker Approach” [Engineering 13 (2022) 186–196]
Erratum to “Targeted Genotyping of a Whole-Gene Repertoire by an Ultrahigh-Multiplex and Flexible HD-Marker Approach” [Engineering 13 (2022) 186–196] Open
View article: Fine-mapping and association analysis of candidate genes for papilla number in sea cucumber, Apostichopus japonicus
Fine-mapping and association analysis of candidate genes for papilla number in sea cucumber, Apostichopus japonicus Open