JunMo Lee
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View article: Morphological and molecular characterization of novel species and intraspecific taxa in <i>Desmodesmus</i> (Scenedesmaceae)
Morphological and molecular characterization of novel species and intraspecific taxa in <i>Desmodesmus</i> (Scenedesmaceae) Open
Desmodesmus (Scenedesmaceae) is a ubiquitous genus of green algae that inhabits freshwater environments. Desmodesmus species are characterized by distinct morphological features such as spines, warts, ribs, and rosettes. These ultrastructu…
View article: Phylogeny and species delimitation of ciliates in the genus<i>Spirostomum</i>(Class, Heterotrichea) using single-cell transcriptomes
Phylogeny and species delimitation of ciliates in the genus<i>Spirostomum</i>(Class, Heterotrichea) using single-cell transcriptomes Open
Ciliates are single-celled microbial eukaryotes that diverged from other eukaryotic lineages over a billion years ago. The extensive evolutionary timespan of ciliate has led to enormous genetic and phenotypic changes, contributing signific…
View article: Taxonomic reinvestigation of the genus Tetradesmus (Scenedesmaceae; Sphaeropleales) based on morphological characteristics and chloroplast genomes
Taxonomic reinvestigation of the genus Tetradesmus (Scenedesmaceae; Sphaeropleales) based on morphological characteristics and chloroplast genomes Open
The genus Tetradesmus (Scenedesmaceae; Sphaeropleales) comprises one of the most abundant green algae in freshwater environments. It includes morphologically diverse species that exhibit bundle-like, plane-arranged coenobia, and unicells, …
View article: Diurnal Rhythms in the Red Seaweed <i>Gracilariopsis chorda</i> are Characterized by Unique Regulatory Networks of Carbon Metabolism
Diurnal Rhythms in the Red Seaweed <i>Gracilariopsis chorda</i> are Characterized by Unique Regulatory Networks of Carbon Metabolism Open
Cellular and physiological cycles are driven by endogenous pacemakers, the diurnal and circadian rhythms. Key functions such as cell cycle progression and cellular metabolism are under rhythmic regulation, thereby maintaining physiological…
View article: Comparative analysis of organelle genomes provides conflicting evidence between morphological similarity and phylogenetic relationship in diatoms
Comparative analysis of organelle genomes provides conflicting evidence between morphological similarity and phylogenetic relationship in diatoms Open
Diatoms (Bacillariophyta) are abundant phytoplankton groups in marine environments, which contribute approximately 20% of global carbon fixation through photosynthesis. Moreover, diatoms exhibit the highest species diversity (approximately…
View article: Metagenome-assembled genomes of the GU0601 sample (the Han River, South Korea)
Metagenome-assembled genomes of the GU0601 sample (the Han River, South Korea) Open
We generated metagenome sequences of the GU0601 sample collected from the Han River and constructed metagenome-assembled genomes (MAGs) to identify their bacterial composition. We identified six MAGs belonging to Alphaproteobacteria, Cyano…
View article: GU0601 metagenome-assembled genomes (MAGs)
GU0601 metagenome-assembled genomes (MAGs) Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Erythrobacter_MAG4
Erythrobacter_MAG4 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Flavobacter_MAG5
Flavobacter_MAG5 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Planktothrix_MAG3
Planktothrix_MAG3 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Flavobacter_MAG5
Flavobacter_MAG5 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Bosea_MAG1
Bosea_MAG1 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Sphingobium_MAG6
Sphingobium_MAG6 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: Fuscovulum_MAG2
Fuscovulum_MAG2 Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: GU0601_Metagenomd-assembled genomes (MAGs)
GU0601_Metagenomd-assembled genomes (MAGs) Open
Freshwater metagenome (Han River, Guri, South Korea)
View article: High-quality genome assembles from key Hawaiian coral species
High-quality genome assembles from key Hawaiian coral species Open
Background Coral reefs house about 25% of marine biodiversity and are critical for the livelihood of many communities by providing food, tourism revenue, and protection from wave surge. These magnificent ecosystems are under existential th…
View article: Additional file 3 of Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs
Additional file 3 of Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs Open
Additional file 3. Alignment file (NEXUS format): Alignment file for Fig. 3a (NEXUS format)
View article: Additional file 2 of Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs
Additional file 2 of Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs Open
Additional file 2: Tables S1-S5. Table S1. Red algal mitogenome information. The genome size, GC content, CDS, ORF, and intron information of red algal mitogenomes published in NCBI are shown in this table. Table S2. Molecular organization…
View article: The complete mitochondrial genome of the benthic diatom <i>Pleurosigma inscriptura</i>
The complete mitochondrial genome of the benthic diatom <i>Pleurosigma inscriptura</i> Open
Pleurosigma inscriptura M. A. Harper 2009 is a marine diatom in Naviculales (Bacillariophyceae) order distributed in New Zealand, South America, Argentina, and Korea. We assembled the complete mitochondrial genome sequence of Pleurosigma i…
View article: Complete mitochondrial genome and phylogenetic analysis of the copper shark <i>Carcharhinus brachyurus</i> (Günther, 1870)
Complete mitochondrial genome and phylogenetic analysis of the copper shark <i>Carcharhinus brachyurus</i> (Günther, 1870) Open
Copper shark (Carcharhinus brachyurus Günther, 1870) is one of the most widely distributed but least known species in the family Carcharhinidae. Herein, we report the first complete mitogenome of C. brachyurus. The overall structure of the…
View article: Transcriptional response in the whiteleg shrimp (Penaeus vannamei) to short-term microplastic exposure
Transcriptional response in the whiteleg shrimp (Penaeus vannamei) to short-term microplastic exposure Open
The ingestion of microplastics by diverse marine organisms induces behavioral disorders, physiological changes, and immune and stress responses. The negative effects of microplastic exposure in penaeid shrimps are still unclear despite the…
View article: Complete mitochondrial genome and phylogenetic analysis of the copper shark <i>Carcharhinus brachyurus</i> (Günther, 1870)
Complete mitochondrial genome and phylogenetic analysis of the copper shark <i>Carcharhinus brachyurus</i> (Günther, 1870) Open
Copper shark (Carcharhinus brachyurus Günther, 1870) is one of the most widely distributed but least known species in the family Carcharhinidae. Herein, we report the first complete mitogenome of C. brachyurus. The overall structure of the…
View article: Complete mitochondrial genome and phylogenetic analysis of the copper shark Carcharhinus brachyurus (Guenther, 1870)
Complete mitochondrial genome and phylogenetic analysis of the copper shark Carcharhinus brachyurus (Guenther, 1870) Open
Supplementary Table 1: PCR primers used for amplification of the copper shark (Carcharhinus brachyurus) mitogenome.Supplementary Table 2: Mitochondrial genome characteristics of copper shark (Carcharhinus brachyurus).Supplementary Table 3:…
View article: Determination of the haplotype and complete mitochondrial genome of the rough-toothed dolphin <i>Steno bredanensis</i> (Cetacea: Delphinidae) stranded in Korea
Determination of the haplotype and complete mitochondrial genome of the rough-toothed dolphin <i>Steno bredanensis</i> (Cetacea: Delphinidae) stranded in Korea Open
We report the complete mitogenome of a rough-toothed dolphin, Steno bredanensis CRI008296, stranded in Korea. Overall, structure and taxonomical position of the mitogenome were analysed, and its determined haplotype indicated that the same…
View article: Characterization of the complete mitochondrial genome and phylogenetic analysis of the common dolphin <i>Delphinus delphis</i> (Cetacea: Delphinidae)
Characterization of the complete mitochondrial genome and phylogenetic analysis of the common dolphin <i>Delphinus delphis</i> (Cetacea: Delphinidae) Open
We report the complete mitogenome of the common dolphin, Delphinus delphis. Overall structure of the 16,387 bp mitogenome was very similar to those of other delphinid species, including the ancient D. delphis individuals. Multigene phyloge…