Junya Zhang
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View article: Deciphering the transfer of antimicrobial resistance genes in the urban water cycle from water source to reuse: a review
Deciphering the transfer of antimicrobial resistance genes in the urban water cycle from water source to reuse: a review Open
View article: Study on characteristics of gut flora composition of pregnant women with preeclampsia
Study on characteristics of gut flora composition of pregnant women with preeclampsia Open
There are significant changes in intestinal flora between preeclampsia patients and healthy controls, which may be involved in the regulation of the occurrence and development of preeclampsia.
View article: Riverine antibiotic resistome along an anthropogenic gradient
Riverine antibiotic resistome along an anthropogenic gradient Open
The introduction of antibiotic-resistant bacteria into riverine systems through the discharge of wastewater treatment plant (WWTP) effluent and agricultural waste poses significant health risks. Even when not pathogenic, these bacteria can…
View article: Integrating comparative genomics and risk classification by assessing virulence, antimicrobial resistance, and plasmid spread in microbial communities with gSpreadComp
Integrating comparative genomics and risk classification by assessing virulence, antimicrobial resistance, and plasmid spread in microbial communities with gSpreadComp Open
Background Comparative genomics, genetic spread analysis, and context-aware ranking are crucial in understanding microbial dynamics’ impact on public health. gSpreadComp streamlines the path from in silico analysis to hypothesis generation…
View article: The metabolites from traditional Chinese medicine targeting ferroptosis for cancer therapy
The metabolites from traditional Chinese medicine targeting ferroptosis for cancer therapy Open
Cancer is a major disease with ever-increasing morbidity and mortality. The metabolites derived from traditional Chinese medicine (TCM) have played a significant role in combating cancers with curative efficacy and unique advantages. Ferro…
View article: Evaluation of the Zenith Tropospheric Delay (ZTD) Derived from VMF3_FC and VMF3_OP Products Based on the CMONOC Data
Evaluation of the Zenith Tropospheric Delay (ZTD) Derived from VMF3_FC and VMF3_OP Products Based on the CMONOC Data Open
Prior tropospheric information, especially zenith tropospheric delay (ZTD), is particularly important in GNSS data processing. The two types of ZTD models, those that require and do not require meteorological parameters, are the most commo…
View article: Clinical value of KiSS-1 and MMP-2 expression levels in breast cancer tissuein evaluating prognosis of elderly breast cancer patients after modified radicalmastectomy
Clinical value of KiSS-1 and MMP-2 expression levels in breast cancer tissuein evaluating prognosis of elderly breast cancer patients after modified radicalmastectomy Open
We attempted to clarify clinical value of KiSS-1 and MMP-2 levels in breast cancer (BC) tissue in evaluating prognosis of elderly BC patients after modified radical mastectomy (MCM). The data of 192 elderly female BC patients receiving MCM…
View article: Novel stable isotope concepts to track antibiotics in wetland systems
Novel stable isotope concepts to track antibiotics in wetland systems Open
View article: Genome-centric analyses of 165 metagenomes show that mobile genetic elements are crucial for the transmission of antimicrobial resistance genes to pathogens in activated sludge and wastewater
Genome-centric analyses of 165 metagenomes show that mobile genetic elements are crucial for the transmission of antimicrobial resistance genes to pathogens in activated sludge and wastewater Open
Wastewater is considered a reservoir of antimicrobial resistance genes (ARGs), where the abundant antimicrobial-resistant bacteria and mobile genetic elements facilitate horizontal gene transfer. However, the prevalence and extent of these…
View article: Viral Communities Contribute More to the Lysis of Antibiotic-Resistant Bacteria than the Transduction of Antibiotic Resistance Genes in Anaerobic Digestion Revealed by Metagenomics
Viral Communities Contribute More to the Lysis of Antibiotic-Resistant Bacteria than the Transduction of Antibiotic Resistance Genes in Anaerobic Digestion Revealed by Metagenomics Open
Ecological role of the viral community on the fate of antibiotic resistance genes (ARGs) (reduction vs proliferation) remains unclear in anaerobic digestion (AD). Metagenomics revealed a dominance of Siphoviridae and Podoviridae among 13,8…
View article: A Temperature-Resilient Anammox Process for Efficient Treatment of Rare Earth Element Tailings Wastewater Via Synergistic Nitrite Supply of Partial Nitritation and Partial Denitrification
A Temperature-Resilient Anammox Process for Efficient Treatment of Rare Earth Element Tailings Wastewater Via Synergistic Nitrite Supply of Partial Nitritation and Partial Denitrification Open
View article: The vOTUs collected in the anaerobic digestion system
The vOTUs collected in the anaerobic digestion system Open
The contigs >5.0 kb were collected, de-replicated and then piped through VirSorter2 (based on sequence similarity and other viral-like features such as GC skew) and VirFinder (based on k-mer signatures) for the identification of viral sequ…
View article: The vOTUs collected in the anaerobic digestion system
The vOTUs collected in the anaerobic digestion system Open
The contigs >5.0 kb were collected, de-replicated and then piped through VirSorter2 (based on sequence similarity and other viral-like features such as GC skew) and VirFinder (based on k-mer signatures) for the identification of viral sequ…
View article: The vOTUs collected in the anaerobic digestion system
The vOTUs collected in the anaerobic digestion system Open
The contigs >5.0 kb were collected, de-replicated and then piped through VirSorter2 (based on sequence similarity and other viral-like features such as GC skew) and VirFinder (based on k-mer signatures) for the identification of viral sequ…
View article: Space aquatic chemistry: A roadmap for drinking water treatment in microgravity
Space aquatic chemistry: A roadmap for drinking water treatment in microgravity Open
Rapid advancement in aerospace technology has successfully enabled long-term life and economic activities in space, particularly in Low Earth Orbit (LEO), extending up to 2000 km from the mean sea level. However, the sustainance of the LEO…
View article: Study on Efficient Removal Method of Fine Particulate Dust in Green Metallurgy Process
Study on Efficient Removal Method of Fine Particulate Dust in Green Metallurgy Process Open
In order to solve the problem of the low removal efficiency of fine particles in the flue gases of the metallurgy process, a chemical agglomeration pretreatment method was studied. The coagulant solution of xanthan gum, konjac gum, and the…
View article: Water Safety Consideration of the Dual Nature of Virus in Global Urban Water Cycle: From Source to Reuse
Water Safety Consideration of the Dual Nature of Virus in Global Urban Water Cycle: From Source to Reuse Open
Rapid urbanization has placed much pressure on the development of concepts and strategies for water safety management in the urban water cycle (UWC), which is closely related to the health and well-being of more than half of the global pop…
View article: Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa
Metagenome-assembled genomes indicate that antimicrobial resistance genes are highly prevalent among urban bacteria and multidrug and glycopeptide resistances are ubiquitous in most taxa Open
Introduction Every year, millions of deaths are associated with the increased spread of antimicrobial resistance genes (ARGs) in bacteria. With the increasing urbanization of the global population, the spread of ARGs in urban bacteria has …
View article: A Single-Stage Membrane Aerated Bioreactor Achieving the Combination of Pn/A and Ebpr: Functional Microorganism Collaboration Revealed by Genome-Centered Analysis
A Single-Stage Membrane Aerated Bioreactor Achieving the Combination of Pn/A and Ebpr: Functional Microorganism Collaboration Revealed by Genome-Centered Analysis Open
View article: An Extensive Assessment of Season Variations Induced by the Rainfall on Intracellular and Extracellular Args in the Urban River Replenished by Reclaimed Water
An Extensive Assessment of Season Variations Induced by the Rainfall on Intracellular and Extracellular Args in the Urban River Replenished by Reclaimed Water Open
View article: Paternal imprinting of dosage-effect defective1 contributes to seed weight xenia in maize
Paternal imprinting of dosage-effect defective1 contributes to seed weight xenia in maize Open
Historically, xenia effects were hypothesized to be unique genetic contributions of pollen to seed phenotype, but most examples represent standard complementation of Mendelian traits. We identified the imprinted dosage-effect defective1 ( …
View article: Mosaic Evolution of Beta-Barrel-Porin-Encoding Genes in <i>Escherichia coli</i>
Mosaic Evolution of Beta-Barrel-Porin-Encoding Genes in <i>Escherichia coli</i> Open
Microevolution studies can disclose more elaborate evolutionary mechanisms of genes, appearing especially important for genes with multifaceted function such as those encoding outer membrane proteins. However, in most cases, the gene is co…
View article: T1SEstacker: A Tri-Layer Stacking Model Effectively Predicts Bacterial Type 1 Secreted Proteins Based on C-Terminal Non-repeats-in-Toxin-Motif Sequence Features
T1SEstacker: A Tri-Layer Stacking Model Effectively Predicts Bacterial Type 1 Secreted Proteins Based on C-Terminal Non-repeats-in-Toxin-Motif Sequence Features Open
Type 1 secretion systems play important roles in pathogenicity of Gram-negative bacteria. However, the substrate secretion mechanism remains largely unknown. In this research, we observed the sequence features of repeats-in-toxin (RTX) pro…
View article: Response of Prokaryotic, Eukaryotic and Algal Communities to Heavy Rainfall in a Reservoir Anchorsupplied with Reclaimed Water
Response of Prokaryotic, Eukaryotic and Algal Communities to Heavy Rainfall in a Reservoir Anchorsupplied with Reclaimed Water Open
View article: Ferric Chloride Further Simplified the Horizontal Gene Transfer Network of Antibiotic Resistance Genes in Anaerobic Digestion
Ferric Chloride Further Simplified the Horizontal Gene Transfer Network of Antibiotic Resistance Genes in Anaerobic Digestion Open
View article: Analysis of Risk Factors Associated With Preterm Delivery After Fetoscopic Laser Surgery for TTTS
Analysis of Risk Factors Associated With Preterm Delivery After Fetoscopic Laser Surgery for TTTS Open
Objective Fetoscopic laser surgery (FLS) is currently the standard treatment for twin to twin transfusion syndrome (TTTS). This study aims to improve the perinatal outcomes of TTTS patients by analyzing the risk factors associated with pre…
View article: T1SEstacker: A tri-layer stacking model effectively predicts bacterial type 1 secreted proteins based on C-terminal non-RTX-motif sequence features
T1SEstacker: A tri-layer stacking model effectively predicts bacterial type 1 secreted proteins based on C-terminal non-RTX-motif sequence features Open
The proteins secreted through type 1 secretion systems often play important roles in pathogenicity of various gram-negative bacteria. However, the type 1 secretion mechanism remains unknown. In this research, we observed the sequence featu…
View article: The SUMO ligase MMS21 profoundly influences maize development through its impact on genome activity and stability
The SUMO ligase MMS21 profoundly influences maize development through its impact on genome activity and stability Open
The post-translational addition of SUMO plays essential roles in numerous eukaryotic processes including cell division, transcription, chromatin organization, DNA repair, and stress defense through its selective conjugation to numerous tar…
View article: Insights into the ambient temperature startup of an anaerobic ceramic membrane bioreactor with thermally hydrolyzed inoculum for domestic wastewater treatment
Insights into the ambient temperature startup of an anaerobic ceramic membrane bioreactor with thermally hydrolyzed inoculum for domestic wastewater treatment Open
View article: Correlation Analysis between GDM and Gut Microbial Composition in Late Pregnancy
Correlation Analysis between GDM and Gut Microbial Composition in Late Pregnancy Open
The prevalence of GDM is very high worldwide. The specific pathogenesis of GDM is currently not very clear. Recent research suggests that changes in the intestinal flora during pregnancy play a key role in it. Therefore, this study is aime…