Luis R. Soenksen
YOU?
Author Swipe
View article: Deep learning-aided decision support for diagnosis of skin disease across skin tones
Deep learning-aided decision support for diagnosis of skin disease across skin tones Open
View article: BioAutoMATED: An end-to-end automated machine learning tool for explanation and design of biological sequences
BioAutoMATED: An end-to-end automated machine learning tool for explanation and design of biological sequences Open
View article: Integrated multimodal artificial intelligence framework for healthcare applications
Integrated multimodal artificial intelligence framework for healthcare applications Open
Artificial intelligence (AI) systems hold great promise to improve healthcare over the next decades. Specifically, AI systems leveraging multiple data sources and input modalities are poised to become a viable method to deliver more accura…
View article: TabText: Language-Based Representations of Tabular Health Data for Predictive Modelling
TabText: Language-Based Representations of Tabular Health Data for Predictive Modelling Open
Tabular medical records remain the most readily available data format for applying machine learning in healthcare. However, traditional data preprocessing ignores valuable contextual information in tables and requires substantial manual cl…
View article: Integrated multimodal artificial intelligence framework for healthcare applications
Integrated multimodal artificial intelligence framework for healthcare applications Open
Artificial intelligence (AI) systems hold great promise to improve healthcare over the next decades. Specifically, AI systems leveraging multiple data sources and input modalities are poised to become a viable method to deliver more accura…
View article: Minimally instrumented SHERLOCK (miSHERLOCK) for CRISPR-based point-of-care diagnosis of SARS-CoV-2 and emerging variants
Minimally instrumented SHERLOCK (miSHERLOCK) for CRISPR-based point-of-care diagnosis of SARS-CoV-2 and emerging variants Open
An integrated, low-cost, sample-to-answer, CRISPR-based diagnostic detects SARS-CoV-2 and variants from unprocessed saliva.
View article: Wearable materials with embedded synthetic biology sensors for biomolecule detection
Wearable materials with embedded synthetic biology sensors for biomolecule detection Open
Integrating synthetic biology into wearables could expand opportunities for noninvasive monitoring of physiological status, disease states and exposure to pathogens or toxins. However, the operation of synthetic circuits generally requires…
View article: Evaluating Deep Neural Networks Trained on Clinical Images in Dermatology with the Fitzpatrick 17k Dataset
Evaluating Deep Neural Networks Trained on Clinical Images in Dermatology with the Fitzpatrick 17k Dataset Open
How does the accuracy of deep neural network models trained to classify clinical images of skin conditions vary across skin color? While recent studies demonstrate computer vision models can serve as a useful decision support tool in healt…
View article: Evaluating Deep Neural Networks Trained on Clinical Images in\n Dermatology with the Fitzpatrick 17k Dataset
Evaluating Deep Neural Networks Trained on Clinical Images in\n Dermatology with the Fitzpatrick 17k Dataset Open
How does the accuracy of deep neural network models trained to classify\nclinical images of skin conditions vary across skin color? While recent studies\ndemonstrate computer vision models can serve as a useful decision support tool\nin he…
View article: A deep learning approach to programmable RNA switches
A deep learning approach to programmable RNA switches Open
View article: Computer-aided classification of suspicious pigmented lesions using wide-field images
Computer-aided classification of suspicious pigmented lesions using wide-field images Open
This work demonstrates that wide-field photography combined with computer-aided classification systems can distinguish suspicious from non-suspicious pigmented lesions, and might be effective to assess the severity of a suspicious pigmente…
View article: Deep Learning for RNA Synthetic Biology
Deep Learning for RNA Synthetic Biology Open
Engineered RNA elements are programmable tools capable of detecting small molecules, proteins, and nucleic acids. Predicting the behavior of these tools remains a challenge, a situation that could be addressed through enhanced pattern reco…
View article: Automated detection of neutropenia using noninvasive video microscopy of superficial capillaries
Automated detection of neutropenia using noninvasive video microscopy of superficial capillaries Open
The authors thank the Madrid-MIT M+Visión Consortium, the Catalystprogram, and MIT linQ for their support and guidance in developing thisproject. They thank Martha L. Gray, Benjamin J. Vakoc, TimothyP. Padera, and all other MIT linQ facult…
View article: PiFlow: A biocompatible low-cost programmable dynamic flow pumping system utilizing a Raspberry Pi Zero and commercial piezoelectric pumps
PiFlow: A biocompatible low-cost programmable dynamic flow pumping system utilizing a Raspberry Pi Zero and commercial piezoelectric pumps Open
View article: GlucoPush: A Do-It-Yourself Add-On for Online Tracking of Personal Glucometer Use
GlucoPush: A Do-It-Yourself Add-On for Online Tracking of Personal Glucometer Use Open
Current public health guidelines on diabetes management recommend frequent self-monitoring and physician tracking of blood glucose to reduce complications caused by this condition. While Internet-of-Things glucometers exist to aid in this …
View article: Interconnected Microphysiological Systems for Quantitative Biology and Pharmacology Studies
Interconnected Microphysiological Systems for Quantitative Biology and Pharmacology Studies Open
View article: Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing
Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing Open
Precise fluid height sensing in open-channel microfluidics has long been a desirable feature for a wide range of applications.
View article: Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing
Closed-loop feedback control for microfluidic systems through automated capacitive fluid height sensing Open
Precise fluid height sensing in open-channel microfluidics has long been a desirable feature for a wide range of applications. However, performing accurate measurements of the fluid level in small-scale reservoirs (<1mL) has proven to be a…
View article: A semi-automated segmentation method for detection of pulmonary embolism in True-FISP MRI sequences
A semi-automated segmentation method for detection of pulmonary embolism in True-FISP MRI sequences Open
Pulmonary embolism (PE) is a highly mortal disease, currently assessed by pulmonary CT angiography. True-FISP MRI has emerged as an innocuous alternative that does not hold many of the limitations of x-ray imaging. However, True-FISP MRI i…
View article: PiFlow: A Biocompatible Low-Cost Programmable Dynamic Flow Pumping System Utilizing a Raspberry Pi Zero and Commercial Piezoelectric Pumps
PiFlow: A Biocompatible Low-Cost Programmable Dynamic Flow Pumping System Utilizing a Raspberry Pi Zero and Commercial Piezoelectric Pumps Open
With the rise of research utilizing microphysiological systems (MPSs), the need for tools that enable the physiological mimicking of the relevant cellular environment is vital. The limited ability to reproduce crucial features of the micro…
View article: Stage-gate process for life sciences and medical innovation investment
Stage-gate process for life sciences and medical innovation investment Open
Life science innovation has led to significant improvements in clinical outcomes and has been a source of financial growth for individuals and institutions capable of performing appropriate investments in this sector. Several groups have d…
View article: Analysis of white blood cell dynamics in nailfold capillaries
Analysis of white blood cell dynamics in nailfold capillaries Open
Based on video data acquired with low-cost, portable microscopy equipment, we introduce a semi-automatic method to count visual gaps in the blood flow as a proxy for white blood cells (WBC) passing through nailfold capillaries. Following m…