Manuel Koch
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View article: Vitamin D-inducible antimicrobial peptide LL-37 binds SARS-CoV-2 Spike and accessory proteins ORF7a and ORF8
Vitamin D-inducible antimicrobial peptide LL-37 binds SARS-CoV-2 Spike and accessory proteins ORF7a and ORF8 Open
Background The role of vitamin D in Coronavirus Disease 2019 (COVID-19) outcomes remains debated, but emerging evidence suggests it may enhance recovery by strengthening immune responses. Vitamin D upregulates LL-37, an antimicrobial pepti…
View article: SVEP1 enables efficient binding of Angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling
SVEP1 enables efficient binding of Angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling Open
The molecular mechanisms that drive (lymph-)angiogenesis are crucial to understand diseases, such as lymphedema, that are caused due to malformations of the lymphatic vasculature. Recently an interaction between the secreted protein Svep1,…
View article: SVEP1 enables efficient binding of Angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling
SVEP1 enables efficient binding of Angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling Open
The molecular mechanisms that drive (lymph-)angiogenesis are crucial to understand diseases, such as lymphedema, that are caused due to malformations of the lymphatic vasculature. Recently an interaction between the secreted protein Svep1,…
View article: Persistent epigenetic memory of SARS-CoV-2 mRNA vaccination in monocyte-derived macrophages
Persistent epigenetic memory of SARS-CoV-2 mRNA vaccination in monocyte-derived macrophages Open
View article: SVEP1 enables efficient binding of Angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling
SVEP1 enables efficient binding of Angiopoietin-2 to the TIE1 receptor, allowing receptor phosphorylation and downstream signaling Open
The molecular mechanisms that drive (lymph-)angiogenesis are crucial to understand diseases, such as lymphedema, that are caused due to malformations of the lymphatic vasculature. Recently an interaction between the secreted protein Svep1,…
View article: High rate of RNAemia and impaired immunity in patients with immunodeficiency in the vaccination era
High rate of RNAemia and impaired immunity in patients with immunodeficiency in the vaccination era Open
The study underscores the importance of humoral response in controlling SARS-CoV-2 replication. RNAemia can serve as a potential biomarker for disease severity in immunocompromised individuals. Therefore, it should be considered in clinica…
View article: Prodomain processing controls <scp>BMP</scp> ‐10 bioactivity and targeting to fibrillin‐1 in latent conformation
Prodomain processing controls <span>BMP</span> ‐10 bioactivity and targeting to fibrillin‐1 in latent conformation Open
Bone morphogenetic protein 10 (BMP‐10) is crucial for endothelial cell signaling via activin receptor‐like kinase 1 (ALK1), a pathway central to vascular homeostasis and angiogenesis. Dysregulated BMP‐10 signaling contributes to cardiovasc…
View article: Detection of Sars-Cov-2 Rnaemia in Patients with Immunodeficiency in the Post-Covid 19 Vaccination Era
Detection of Sars-Cov-2 Rnaemia in Patients with Immunodeficiency in the Post-Covid 19 Vaccination Era Open
View article: A novel homozygous nonsense variant in <i>COL12A1</i> causes myopathic Ehlers‐Danlos syndrome: A case report and literature review
A novel homozygous nonsense variant in <i>COL12A1</i> causes myopathic Ehlers‐Danlos syndrome: A case report and literature review Open
The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. The data that support the findings of this study are available on re…
View article: Spatial proteomics of skeletal muscle using thin cryosections reveals metabolic adaptation at the muscle-tendon transition zone
Spatial proteomics of skeletal muscle using thin cryosections reveals metabolic adaptation at the muscle-tendon transition zone Open
Morphological studies of skeletal muscle tissue provide insights into the architecture of muscle fibers, the surrounding cells, and the extracellular matrix (ECM). However, a spatial proteomics analysis of the skeletal muscle including the…
View article: Identifying the molecular basis of Laminin N-terminal domain Ca2+ binding using a hybrid approach
Identifying the molecular basis of Laminin N-terminal domain Ca2+ binding using a hybrid approach Open
View article: Fibre type differences in the organisation of mononuclear cells and myonuclei at the tips of human myofibres
Fibre type differences in the organisation of mononuclear cells and myonuclei at the tips of human myofibres Open
The myotendinous junction (MTJ) is a weak link in the musculoskeletal system. Here, we isolated the tips of single myofibres from healthy human hamstring muscles for confocal microscopy (n=6) and RNAscope in situ hybridization (n=6) to gai…
View article: Identification of FasL as a crucial host factor driving COVID-19 pathology and lethality
Identification of FasL as a crucial host factor driving COVID-19 pathology and lethality Open
View article: Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons
Dual topologies of myotomal collagen XV and Tenascin C act in concert to guide and shape developing motor axons Open
During development, motor axons are guided toward muscle target by various extrinsic cues including extracellular matrix (ECM) proteins whose identities and cellular source remain poorly characterized. Here, using single-cell RNAseq of sor…
View article: Implementation-Friendly Inverse Modeling of Building Thermodynamics for Predictive Demand Response
Implementation-Friendly Inverse Modeling of Building Thermodynamics for Predictive Demand Response Open
View article: Implementation-Friendly Inverse Modeling of Building Thermodynamics for Predictive Demand Response
Implementation-Friendly Inverse Modeling of Building Thermodynamics for Predictive Demand Response Open
View article: Osteoclast-specific Plastin 3 knockout in mice fail to develop osteoporosis despite dramatic increased osteoclast resorption activity
Osteoclast-specific Plastin 3 knockout in mice fail to develop osteoporosis despite dramatic increased osteoclast resorption activity Open
PLS3 loss-of-function mutations in humans and mice cause X-linked primary osteoporosis. However, it remains largely unknown how PLS3 mutations cause osteoporosis and which function PLS3 plays in bone homeostasis. A recent study showed that…
View article: Age-related structural and functional changes of the intracardiac nervous system
Age-related structural and functional changes of the intracardiac nervous system Open
Background Although aging is known to be associated with an increased incidence of both atrial and ventricular arrhythmias, there is limited knowledge about how Schwann cells (SC) and the intracardiac nervous system (iCNS) remodel with age…
View article: Discovery of highly neutralizing human antibodies targeting Pseudomonas aeruginosa
Discovery of highly neutralizing human antibodies targeting Pseudomonas aeruginosa Open
Drug-resistant Pseudomonas aeruginosa (PA) poses an emerging threat to human health with urgent need for alternative therapeutic approaches. Here, we deciphered the B cell and antibody response to the virulence-associated type III secretio…
View article: The unique ORF8 protein from SARS-CoV-2 binds to human dendritic cells and induces a hyper-inflammatory cytokine storm
The unique ORF8 protein from SARS-CoV-2 binds to human dendritic cells and induces a hyper-inflammatory cytokine storm Open
The novel coronavirus pandemic, first reported in December 2019, was caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). SARS-CoV-2 infection leads to a strong immune response and activation of antigen-presenting ce…
View article: Chemokine Binding to Tenascin-C Influences Chemokine-Induced Immune Cell Migration
Chemokine Binding to Tenascin-C Influences Chemokine-Induced Immune Cell Migration Open
Tenascin-C (TNC) is a complex glycoprotein of the extracellular matrix (ECM) involved in a plethora of (patho-)physiological processes, such as oncogenesis and inflammation. Since chemokines play an essential role in both disease processes…
View article: Fibroblast-derived matrix models desmoplastic properties and forms a prognostic signature in cancer progression
Fibroblast-derived matrix models desmoplastic properties and forms a prognostic signature in cancer progression Open
The desmoplastic reaction observed in many cancers is a hallmark of disease progression and prognosis, particularly in breast and pancreatic cancer. Stromal-derived extracellular matrix (ECM) is significantly altered in desmoplasia, and as…
View article: Ablation of collagen XII disturbs joint extracellular matrix organization and causes patellar subluxation
Ablation of collagen XII disturbs joint extracellular matrix organization and causes patellar subluxation Open
Collagen XII, belonging to the fibril-associated collagens, is a homotrimeric secreted extracellular matrix (ECM) protein encoded by the COL12A1 gene. Mutations in the human COL12A1 gene cause an Ehlers-Danlos/myopathy overla…
View article: Dual-topology of collagen XV and tenascin C acts in concert to guide and shape developing motor axons
Dual-topology of collagen XV and tenascin C acts in concert to guide and shape developing motor axons Open
During development, motor axons are guided towards their muscle target by various extrinsic cues including extracellular matrix (ECM) proteins those identities remain poorly documented. Using single-cell RNA-sequencing of differentiating s…
View article: Dissecting the impact of somatic hypermutation on SARS-CoV-2 neutralization and viral escape
Dissecting the impact of somatic hypermutation on SARS-CoV-2 neutralization and viral escape Open
SUMMARY Somatic hypermutation (SHM) drives affinity maturation and continues over months in SARS-CoV-2 neutralizing antibodies. Yet, several potent SARS-CoV-2 antibodies carry no or only few mutations, leaving the question of how ongoing S…
View article: Investigating Chemokine-Matrix Networks in Breast Cancer: Tenascin-C Sets the Tone for CCL2
Investigating Chemokine-Matrix Networks in Breast Cancer: Tenascin-C Sets the Tone for CCL2 Open
Bidirectional dialogue between cellular and non-cellular components of the tumor microenvironment (TME) drives cancer survival. In the extracellular space, combinations of matrix molecules and soluble mediators provide external cues that d…
View article: A comparison of methods to eliminate regularization weight tuning from data-enabled predictive control
A comparison of methods to eliminate regularization weight tuning from data-enabled predictive control Open
Data-enabled predictive control (DeePC) is a recently established form of Model Predictive Control (MPC), based on behavioral systems theory. While eliminating the need to explicitly identify a model, it requires an additional regularizati…
View article: Glycyrrhizic Acid Prevents Paclitaxel-Induced Neuropathy via Inhibition of OATP-Mediated Neuronal Uptake
Glycyrrhizic Acid Prevents Paclitaxel-Induced Neuropathy via Inhibition of OATP-Mediated Neuronal Uptake Open
Peripheral neuropathy is a common side effect of cancer treatment with paclitaxel. The mechanisms by which paclitaxel is transported into neurons, which are essential for preventing neuropathy, are not well understood. We studied the uptak…
View article: Svep1 is a binding ligand of Tie1 and affects specific aspects of facial lymphatic development in a Vegfc-independent manner
Svep1 is a binding ligand of Tie1 and affects specific aspects of facial lymphatic development in a Vegfc-independent manner Open
Multiple factors are required to form functional lymphatic vessels. Here, we uncover an essential role for the secreted protein Svep1 and the transmembrane receptor Tie1 during the development of subpopulations of the zebrafish facial lymp…
View article: Supplementary Data from Tenascin-C Orchestrates an Immune-Suppressive Tumor Microenvironment in Oral Squamous Cell Carcinoma
Supplementary Data from Tenascin-C Orchestrates an Immune-Suppressive Tumor Microenvironment in Oral Squamous Cell Carcinoma Open
Supplemental Figures S1 - S7 Supplemental Tables S1 - S17