Martin Trtílek
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View article: Computer vision‐based recognition and distinction of <i>Arabidopsis thaliana</i> ecotypes using supervised deep learning models
Computer vision‐based recognition and distinction of <i>Arabidopsis thaliana</i> ecotypes using supervised deep learning models Open
Image‐based plant phenotyping has diverse applications, ranging from providing quantitative traits for genetic breeding to enhancing management practices for indoor and outdoor production systems. Misidentification of cell lines or ecotype…
View article: Thermal study of plants in a dynamic environment using thermovision
Thermal study of plants in a dynamic environment using thermovision Open
We examined the effect of light-induced heating of leaves in wild-type (Col-0) and tmm-1 Arabidopsis plants. The results showed that the tmm-1 mutant exhibits accelerated cooling of rosettes in response to changes in light intensity, as de…
View article: Automated phenotyping of microalgae: scalable solution for high-throughput analysis
Automated phenotyping of microalgae: scalable solution for high-throughput analysis Open
Laboratory automation is transforming biotechnology, yet current microalgal phenotyping platforms lack the integration and scalability needed for comprehensive trait analysis under diverse conditions. To address this, PhenoSelect was devel…
View article: The burning glass effect of water droplets triggers a high light-induced calcium response in the chloroplast stroma
The burning glass effect of water droplets triggers a high light-induced calcium response in the chloroplast stroma Open
View article: Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses: insights from comparative analysis of <i>Brassica</i> type-A response regulators
Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses: insights from comparative analysis of <i>Brassica</i> type-A response regulators Open
Multistep phosphorelay (MSP) signaling integrates hormonal and environmental signals to control both plant development and adaptive responses. Type-A RESPONSE REGULATOR (RRA) genes, the downstream members of the MSP cascade and cytokinin p…
View article: Novel technique for the ultra-sensitive detection of hazardous contaminants using an innovative sensor integrated with a bioreactor
Novel technique for the ultra-sensitive detection of hazardous contaminants using an innovative sensor integrated with a bioreactor Open
This study introduces an evaluation methodology tailored for bioreactors, with the aim of assessing the stress experienced by algae due to harmful contaminants released from antifouling (AF) paints. We present an online monitoring system e…
View article: The interaction between titanium dioxide nanoparticles and light can have dualistic effects on the physiological responses of plants
The interaction between titanium dioxide nanoparticles and light can have dualistic effects on the physiological responses of plants Open
View article: High-Throughput Spike Detection in Greenhouse Cultivated Grain Crops with Attention Mechanisms-Based Deep Learning Models
High-Throughput Spike Detection in Greenhouse Cultivated Grain Crops with Attention Mechanisms-Based Deep Learning Models Open
View article: Benchmarking of Two Peptide Clean-Up Protocols: SP2 and Ethyl Acetate Extraction for Sodium Dodecyl Sulfate or Polyethylene Glycol Removal from Plant Samples before LC-MS/MS
Benchmarking of Two Peptide Clean-Up Protocols: SP2 and Ethyl Acetate Extraction for Sodium Dodecyl Sulfate or Polyethylene Glycol Removal from Plant Samples before LC-MS/MS Open
The success of bottom-up proteomic analysis frequently depends on the efficient removal of contaminants from protein or peptide samples before LC-MS/MS. For a peptide clean-up workflow, single-pot solid-phase-enhanced peptide sample prepar…
View article: Shoot phenotyping of cytokinin receptors mutants revealed fluorescence parameters as early markers of drought stress
Shoot phenotyping of cytokinin receptors mutants revealed fluorescence parameters as early markers of drought stress Open
Plant phenotyping represents an increasing promise in plant research by providing a complex picture of plant development and fitness. In research focused on various environmental stresses, phenotyping can uncover markers that can sensitive…
View article: Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses in Brassicaceae
Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses in Brassicaceae Open
Multistep phosphorelay (MSP) signaling integrates hormonal and environmental signals to control plant development and adaptive responses. The type-A RESPONSE REGULATORs ( RRAs ), the downstream members of the MSP cascade and cytokinin prim…
View article: A new device for online nanoscale sampling and capillary electrophoresis analysis of plant sap composition
A new device for online nanoscale sampling and capillary electrophoresis analysis of plant sap composition Open
In this work, an online sampling of plant xylem sap combined with an efficient (CE)‐based method was developed and applied to study the kinetics of changes in the sap composition and to assess plant fitness under stress conditions comprehe…
View article: iReenCAM: automated imaging system for kinetic analysis of photosynthetic pigment biosynthesis at high spatiotemporal resolution during early deetiolation
iReenCAM: automated imaging system for kinetic analysis of photosynthetic pigment biosynthesis at high spatiotemporal resolution during early deetiolation Open
Seedling de-etiolation is one of the key stages of the plant life cycle, characterized by a strong rearrangement of the plant development and metabolism. The conversion of dark accumulated protochlorophyllide to chlorophyll in etioplasts o…
View article: Fluorescence Analysis of Biocide Efficiency in Antifouling Coatings against Cyanobacteria
Fluorescence Analysis of Biocide Efficiency in Antifouling Coatings against Cyanobacteria Open
This study focused on the antifouling effect of copper oxide (Cu2O)- and zineb-based coatings against Cyanothece sp. ATCC 51142 by analysing photosynthetic activity using chlorophyll fluorescence. The photoautotrophically grown cyanobacter…
View article: Antenna Modification Leads to Enhanced Nitrogenase Activity in a High Light-Tolerant Cyanobacterium
Antenna Modification Leads to Enhanced Nitrogenase Activity in a High Light-Tolerant Cyanobacterium Open
The function of phycobilisomes, the large antenna protein complexes in heterocysts has long been debated. This study provides direct evidence of the involvement of these proteins in supporting nitrogenase activity in Anabaena 33047, a hete…
View article: Antenna modification leads to enhanced nitrogenase activity in a high light tolerant cyanobacterium
Antenna modification leads to enhanced nitrogenase activity in a high light tolerant cyanobacterium Open
Biological nitrogen fixation is an energy intensive process that contributes significantly towards supporting life on this planet. Among nitrogen-fixing organisms, cyanobacteria remain unrivaled in their ability to fuel the energetically e…
View article: Towards Automated Analysis of Grain Spikes in Greenhouse Images Using Neural Network Approaches: A Comparative Investigation of Six Methods
Towards Automated Analysis of Grain Spikes in Greenhouse Images Using Neural Network Approaches: A Comparative Investigation of Six Methods Open
Automated analysis of small and optically variable plant organs, such as grain spikes, is highly demanded in quantitative plant science and breeding. Previous works primarily focused on the detection of prominently visible spikes emerging …
View article: AHK5 mediates ETR1-initiated multistep phosphorelay in <i>Arabidopsis</i>
AHK5 mediates ETR1-initiated multistep phosphorelay in <i>Arabidopsis</i> Open
Summary Plants, like other sessile organisms, need to sense many different signals, and in response to them, modify their developmental programs to be able to survive in a highly changing environment. The multistep phosphorelay (MSP) in pl…
View article: Genetic mapping of the early responses to salt stress in <i>Arabidopsis thaliana</i>
Genetic mapping of the early responses to salt stress in <i>Arabidopsis thaliana</i> Open
Summary Salt stress decreases plant growth prior to significant ion accumulation in the shoot. However, the processes underlying this rapid reduction in growth are still unknown. To understand the changes in salt stress responses through t…
View article: Thermal Analysis of Stomatal Response under Salinity and High Light
Thermal Analysis of Stomatal Response under Salinity and High Light Open
A non-destructive thermal imaging method was used to study the stomatal response of salt-treated Arabidopsis thaliana plants to excessive light. The plants were exposed to different levels of salt concentrations (0, 75, 150, and 220 mM NaC…
View article: Thermographic Study of Plant Response to Excessive Light
Thermographic Study of Plant Response to Excessive Light Open
Thermal imaging as a highly sensitive technique was used to study a rapid response of plants to excessive light associated with stomatal movement.This response was monitored according to timedependent changes in temperature over the leaf b…
View article: Genetic mapping of the early responses to salt stress in<i>Arabidopsis thaliana</i>
Genetic mapping of the early responses to salt stress in<i>Arabidopsis thaliana</i> Open
Salt stress decreases plant growth prior to significant ion accumulation in the shoot. However, the processes underlying this rapid reduction in growth are still unknown. To understand the changes in salt stress responses through time and …
View article: Glucose uptake to guard cells via <scp>STP</scp> transporters provides carbon sources for stomatal opening and plant growth
Glucose uptake to guard cells via <span>STP</span> transporters provides carbon sources for stomatal opening and plant growth Open
View article: Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
The Arabidopsis mutant rcd1 is tolerant to methyl viologen (MV). MV enhances the Mehler reaction, i.e. electron transfer from Photosystem I (PSI) to O 2 , generating reactive oxygen species (ROS) in the chloroplast. To study the MV toleran…
View article: Supplementary Table S1. Metabolic analyses from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Supplementary Table S1. Metabolic analyses from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
Metabolic analyses
View article: Supplementary table S2. Source data and statistics from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Supplementary table S2. Source data and statistics from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
Source data and statistics
View article: Supplementary Table S1. Metabolic analyses from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Supplementary Table S1. Metabolic analyses from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
Metabolic analyses
View article: Supplementary table S3. Genes induced in rcd1, AA, hypoxia from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Supplementary table S3. Genes induced in rcd1, AA, hypoxia from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
Genes induced in rcd1 and in Col-0 by AA or hypoxia
View article: Supplementary table S2. Source data and statistics from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Supplementary table S2. Source data and statistics from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
Source data and statistics
View article: Supplementary table S3. Genes induced in rcd1, AA, hypoxia from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant
Supplementary table S3. Genes induced in rcd1, AA, hypoxia from Dissecting the interaction of photosynthetic electron transfer with mitochondrial signalling and hypoxic response in the Arabidopsis <i>rcd1</i> mutant Open
Genes induced in rcd1 and in Col-0 by AA or hypoxia