Mathieu Gonin
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View article: Two Lateral Organ Boundary Domain Transcription Factors HvCRL1 and HvCRL1L1 Regulate Shoot-Borne Root Formation in Barley (Hordeum vulgare L.)
Two Lateral Organ Boundary Domain Transcription Factors HvCRL1 and HvCRL1L1 Regulate Shoot-Borne Root Formation in Barley (Hordeum vulgare L.) Open
Plant-specific LOB-domain (LBD) transcription factors are crucial in post-embryonic root initiation. In cereals, the fibrous root system comprises primary and seminal roots that develop during embryogenesis and lateral- and crown roots tha…
View article: Transcriptional changes during crown-root development and emergence in barley (Hordeum vulgare L.)
Transcriptional changes during crown-root development and emergence in barley (Hordeum vulgare L.) Open
Background Roots play an important role during plant growth and development, ensuring water and nutrient uptake. Understanding the mechanisms regulating their initiation and development opens doors towards root system architecture engineer…
View article: Plant microbiota controls an alternative root branching regulatory mechanism in plants
Plant microbiota controls an alternative root branching regulatory mechanism in plants Open
The establishment of beneficial interactions with microbes has helped plants to modulate root branching plasticity in response to environmental cues. However, how the plant microbiota harmonizes with plant roots to control their branching …
View article: <scp>CROWN ROOTLESS1</scp> binds <scp>DNA</scp> with a relaxed specificity and activates <i>OsROP</i> and <i>OsbHLH044</i> genes involved in crown root formation in rice
<span>CROWN ROOTLESS1</span> binds <span>DNA</span> with a relaxed specificity and activates <i>OsROP</i> and <i>OsbHLH044</i> genes involved in crown root formation in rice Open
SUMMARY In cereals, the root system is mainly composed of post‐embryonic shoot‐borne roots, named crown roots. The CROWN ROOTLESS1 (CRL1) transcription factor, belonging to the ASYMMETRIC LEAVES2‐LIKE/LATERAL ORGAN BOUNDARIES DOMAIN (ASL/L…
View article: Sculpting the soil microbiota
Sculpting the soil microbiota Open
SUMMARY Soil is a living ecosystem, the health of which depends on fine interactions among its abiotic and biotic components. These form a delicate equilibrium maintained through a multilayer network that absorbs certain perturbations and …
View article: Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice
Transcriptome profiling of laser-captured crown root primordia reveals new pathways activated during early stages of crown root formation in rice Open
Crown roots constitute the main part of the rice root system. Several key genes involved in crown root initiation and development have been identified by functional genomics approaches. Nevertheless, these approaches are impaired by functi…
View article: Inference of the gene regulatory network acting downstream of <scp>CROWN ROOTLESS </scp>1 in rice reveals a regulatory cascade linking genes involved in auxin signaling, crown root initiation, and root meristem specification and maintenance
Inference of the gene regulatory network acting downstream of <span>CROWN ROOTLESS </span>1 in rice reveals a regulatory cascade linking genes involved in auxin signaling, crown root initiation, and root meristem specification and maintenance Open
Summary Crown roots (CRs) are essential components of the rice root system. Several genes involved in CR initiation or development have been identified but our knowledge about how they organize to form a gene regulatory network (GRN) is st…
View article: What Makes Adventitious Roots?
What Makes Adventitious Roots? Open
The spermatophyte root system is composed of a primary root that develops from an embryonically formed root meristem, and of different post-embryonic root types: lateral and adventitious roots. Adventitious roots, arising from the stem of …
View article: Genome-wide association mapping for root traits in a panel of rice accessions from Vietnam
Genome-wide association mapping for root traits in a panel of rice accessions from Vietnam Open
Some of the major quantitative trait loci we detected through this genome-wide association study contain promising candidate genes encoding regulatory elements of known key regulators of root formation and development.