Ming-He Li
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View article: Transcriptome analysis reveals the mechanisms underlying petal growth during the flower opening process in Phalaenopsis orchids
Transcriptome analysis reveals the mechanisms underlying petal growth during the flower opening process in Phalaenopsis orchids Open
Our results lay a foundation for further exploration of the molecular mechanisms regulating petal size development and are significant for molecular breeding programs aimed at generating novel Phalaenopsis with desirable traits.
View article: The complete mitochondrial genome of Castanopsis carlesii and Castanea henryi reveals the rearrangement and size differences of mitochondrial DNA molecules
The complete mitochondrial genome of Castanopsis carlesii and Castanea henryi reveals the rearrangement and size differences of mitochondrial DNA molecules Open
Background Castanopsis carlesii is a dominant tree species in subtropical evergreen broad-leaved forests and holds significant ecological value. It serves as an excellent timber tree species and raw material for cultivating edible fungi. H…
View article: Genome-Wide Identification and Expression Pattern Analysis of TIFY Family Genes Reveal Their Potential Roles in Phalaenopsis aphrodite Flower Opening
Genome-Wide Identification and Expression Pattern Analysis of TIFY Family Genes Reveal Their Potential Roles in Phalaenopsis aphrodite Flower Opening Open
The TIFY gene family (formerly known as the zinc finger proteins expressed in inflorescence meristem (ZIM) family) not only functions in plant defense responses but also are widely involved in regulating plant growth and development. Howev…
View article: The Complete Chloroplast Genomes of Bulbophyllum (Orchidaceae) Species: Insight into Genome Structure Divergence and Phylogenetic Analysis
The Complete Chloroplast Genomes of Bulbophyllum (Orchidaceae) Species: Insight into Genome Structure Divergence and Phylogenetic Analysis Open
Bulbophyllum is one of the largest genera and presents some of the most intricate taxonomic problems in the family Orchidaceae, including species of ornamental and medical importance. The lack of knowledge regarding the characterization of…
View article: Comparative Analysis of Six Complete Plastomes of Tripterospermum spp.
Comparative Analysis of Six Complete Plastomes of Tripterospermum spp. Open
The Tripterospermum, comprising 34 species, is a genus of Gentianaceae. Members of Tripterospermum are mostly perennial, entwined herbs with high medicinal value and rich in iridoids, xanthones, flavonoids, and triterpenes. However, our in…
View article: Identification and Analysis of PEPC Gene Family Reveals Functional Diversification in Orchidaceae and the Regulation of Bacterial-Type PEPC
Identification and Analysis of PEPC Gene Family Reveals Functional Diversification in Orchidaceae and the Regulation of Bacterial-Type PEPC Open
Phosphoenolpyruvate carboxylase (PEPC) gene family plays a crucial role in both plant growth and response to abiotic stress. Approximately half of the Orchidaceae species are estimated to perform CAM pathway, and the availability of sequen…
View article: An Analytical Solution for the Scattering of Sh Waves by Asymmetric Triangular Protrusions on Material Surfaces
An Analytical Solution for the Scattering of Sh Waves by Asymmetric Triangular Protrusions on Material Surfaces Open
View article: Chloroplast Genome Comparison and Evolution Analysis of Dendrobium (Orchidaceae) among Multiple Photosynthetic Pathways
Chloroplast Genome Comparison and Evolution Analysis of Dendrobium (Orchidaceae) among Multiple Photosynthetic Pathways Open
Dendrobium Sw have multiple photosynthetic pathways but due to the lack of identification, the influence of CAM pathway on the plastid genomic evolution of Dendrobium and the origin of CAM pathway are still poorly understood. In this study…
View article: The Complete Chloroplast Genomes of <em>Bulbophyllum </em>(Orchidaceae) Species: Insight into Genome Structure Divergence and Phylogenetic Analysis
The Complete Chloroplast Genomes of <em>Bulbophyllum </em>(Orchidaceae) Species: Insight into Genome Structure Divergence and Phylogenetic Analysis Open
Bulbophyllum is one of the largest genera and presents some of the most intricate taxonomic problems in the family Orchidaceae, including species of ornamental and medical importance. The lack of knowledge regarding the characterization of…
View article: Comparative Analysis of Malaxidinae (Orchidaceae) Plastome: Phylogenetic Relationship and Potential Molecular Marker
Comparative Analysis of Malaxidinae (Orchidaceae) Plastome: Phylogenetic Relationship and Potential Molecular Marker Open
Malaxidinae is one of the confusing groups with classification in Orchidaceae. Previous phylogenetic analysis reveals that the relationships among the taxa in Malaxidinae have not yet been reliably established using a few plastome regions …
View article: Characterization of Angraecum (Angraecinae, Orchidaceae) Plastomes and Utility of Sequence Variability Hotspots
Characterization of Angraecum (Angraecinae, Orchidaceae) Plastomes and Utility of Sequence Variability Hotspots Open
Angraecum, commonly known as Darwin’s orchid, is the largest genus of Angraecinae (Orchidaceae). This genus exhibits a high morphological diversity, making it as a good candidate for macroevolutionary studies. In this study, four complete …
View article: Comparative and phylogenetic analysis of Chiloschista (Orchidaceae) species and DNA barcoding investigation based on plastid genomes
Comparative and phylogenetic analysis of Chiloschista (Orchidaceae) species and DNA barcoding investigation based on plastid genomes Open
View article: Comparative Analysis of Plastomes in Elsholtzieae: Phylogenetic Relationships and Potential Molecular Markers
Comparative Analysis of Plastomes in Elsholtzieae: Phylogenetic Relationships and Potential Molecular Markers Open
The Elsholtzieae, comprising ca. 7 genera and 70 species, is a small tribe of Lamiaceae (mint family). Members of Elsholtzieae are of high medicinal, aromatic, culinary, and ornamentals value. Despite the rich diversity and value of Elshol…
View article: Characteristics and Comparative Analysis of Seven Complete Plastomes of Trichoglottis s.l. (Aeridinae, Orchidaceae)
Characteristics and Comparative Analysis of Seven Complete Plastomes of Trichoglottis s.l. (Aeridinae, Orchidaceae) Open
Trichoglottis exhibits a range of rich variations in colors and shapes of flower and is a valuable ornamental orchid genus. The genus Trichoglottis has been expanded by the inclusion of Staurochilus, but this Trichoglottis sensu lato (s.l.…
View article: Characterization and Comparative Analysis of the Complete Plastomes of Five Epidendrum (Epidendreae, Orchidaceae) Species
Characterization and Comparative Analysis of the Complete Plastomes of Five Epidendrum (Epidendreae, Orchidaceae) Species Open
Epidendrum, one of the three largest genera of Orchidaceae, exhibits significant horticultural and ornamental value and serves as an important research model in conservation, ecology, and evolutionary biology. Given the ambiguous identific…
View article: Rare Species Are Significant in Harsh Environments and Unstable Communities: Based on the Changes of Species Richness and Community Stability in Different Sub-Assemblages
Rare Species Are Significant in Harsh Environments and Unstable Communities: Based on the Changes of Species Richness and Community Stability in Different Sub-Assemblages Open
To understand the contribution of different sub-assemblages (sub-communities) in the shrub and herb layers to the distribution patterns of community species richness and the stability of the Pinus massoniana Lamb. community, this study was…
View article: Comparative Phylogenetic Analysis for Aerides (Aeridinae, Orchidaceae) Based on Six Complete Plastid Genomes
Comparative Phylogenetic Analysis for Aerides (Aeridinae, Orchidaceae) Based on Six Complete Plastid Genomes Open
Aerides Lour. (Orchidaceae, Aeridinae) is a group of epiphytic orchids with high ornamental value, mainly distributed in tropical and subtropical forests, that comprises approximately 20 species. The species are of great value in floricult…
View article: Complete Chloroplast Genomes and Comparative Analyses of Three Paraphalaenopsis (Aeridinae, Orchidaceae) Species
Complete Chloroplast Genomes and Comparative Analyses of Three Paraphalaenopsis (Aeridinae, Orchidaceae) Species Open
Paraphalaenopsis, a genus of perennial herbs from the family Orchidaceae, contains a number of ornamental species. However, there is no information on the chloroplast genomes of Paraphalaenopsis, which limits our studies of this genus. In …
View article: Genome-Wide Identification of the YABBY Gene Family in Dendrobium Orchids and Its Expression Patterns in Dendrobium chrysotoxum
Genome-Wide Identification of the YABBY Gene Family in Dendrobium Orchids and Its Expression Patterns in Dendrobium chrysotoxum Open
The small plant-specific YABBY gene family plays key roles in diverse developmental processes in plants. Dendrobium chrysotoxum, D. huoshanense, and D. nobile are perennial herbaceous plants belonging to Orchidaceae with a high ornamental …
View article: Origin and diversification of a Himalayan orchid genus Pleione
Origin and diversification of a Himalayan orchid genus Pleione Open
Pleione is an orchid endemically distributed in high mountain areas across the Hengduan Mountains (HDM), Himalayas, Southeast Asia and South of China. The unique flower shapes, rich colors and immense medicinal importance of Pleione are va…
View article: Genome-wide analysis of the TCP gene family and their expression pattern in Cymbidium goeringii
Genome-wide analysis of the TCP gene family and their expression pattern in Cymbidium goeringii Open
TCP gene family are specific transcription factors for plant, and considered to play an important role in development and growth. However, few related studies investigated the TCP gene trait and how it plays a role in growth and developmen…
View article: The complete plastome of<i>Bulbophyllum pingnanense</i>(Orchidaceae: Dendrobiinae)
The complete plastome of<i>Bulbophyllum pingnanense</i>(Orchidaceae: Dendrobiinae) Open
The complete plastid genome of Bulbophyllum pingnanense, a critically endangered species, was determined and analyzed in this study. The complete genome was 151,224 bp in length, consisting of a large single-copy region (LSC) of 86,…
View article: Phylogenetic incongruence in Cymbidium orchids
Phylogenetic incongruence in Cymbidium orchids Open
View article: The complete plastid genome of <i>Thrixspermum centipeda</i> (Orchidaceae, Aeridinae)
The complete plastid genome of <i>Thrixspermum centipeda</i> (Orchidaceae, Aeridinae) Open
The complete plastid genome of the type species of Thrixspermum, Th. centipeda, was determined and analyzed in this work. The plastome was 147,888 bp in length with 85,899 bp of the large single-copy (LSC) region, 11,055 bp o…
View article: The complete plastid genome of <i>Vanda subconcolor</i> (Orchidaceae, Aeridinae)
The complete plastid genome of <i>Vanda subconcolor</i> (Orchidaceae, Aeridinae) Open
The complete plastid genome of Vanda subconcolor was assembled and analyzed. The genome size was 149,490 bp, containing a large single-copy region (LSC) of 85,691 bp, two inverted repeat regions (IRA and IRB) of 25,912 bp, and a small sing…
View article: Liparis mai (Orchidaceae; Malaxideae), a new species from China: evidence from morphological and molecular analyses
Liparis mai (Orchidaceae; Malaxideae), a new species from China: evidence from morphological and molecular analyses Open
A new species, Liparis mai (Malaxidinae, Epidendroideae, Orchidaceae), from Guangxi, China, is illustrated and described based on morphological and molecular analyses. This new species is similar to L. nervosa but differs by the older pseu…
View article: The complete plastid genome of <i>Thrixspermum tsii</i> (Orchidaceae, Aeridinae)
The complete plastid genome of <i>Thrixspermum tsii</i> (Orchidaceae, Aeridinae) Open
The complete plastid genome of Thrixspermum tsii was determined and analyzed in this work. The plastome was 149,689 bp in length with 86,778 bp of the large single-copy (LSC) region, 12,129 bp of the small single-copy (SSC) region a…
View article: The complete plastid genome of <i>Holcoglossum singchianum</i> (Orchidaceae, Vandeae)
The complete plastid genome of <i>Holcoglossum singchianum</i> (Orchidaceae, Vandeae) Open
The complete plastid genome of Holcoglossum singchianum was determined and analyzed in this work. The plastome was 147,715 bp in length with 84,094 bp of the large single-copy (LSC) region, 12,073 bp of the small single-copy (SSC) r…
View article: Complete plastid genome of <i>Cheirostylis chinensis</i> (Orchidaceae, Goodyerinae)
Complete plastid genome of <i>Cheirostylis chinensis</i> (Orchidaceae, Goodyerinae) Open
The first complete plastid genome of Cheirostylis, Ch. chinensis, was assembled and analyzed in this study. The total genome was 147,218 bp in length, consisting of a large single-copy region (LSC) of 81,081 bp, a small singl…
View article: A perspective on crassulacean acid metabolism photosynthesis evolution of orchids on different continents: Dendrobium as a case study
A perspective on crassulacean acid metabolism photosynthesis evolution of orchids on different continents: Dendrobium as a case study Open
Members of the Orchidaceae, one of the largest families of flowering plants, evolved the crassulacean acid metabolism (CAM) photosynthesis strategy. It is thought that CAM triggers adaptive radiation into new niche spaces, yet very little …