Oumaima Moubset
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View article: Reconstructing the Mastrevirus communities structure on La Réunion: The tale of agricultural associated pathogens
Reconstructing the Mastrevirus communities structure on La Réunion: The tale of agricultural associated pathogens Open
The geographical distribution and diversity of viruses can differ between cultivated areas and adjacent natural environments, raising questions about the interplay between plant diversity and the species richness and prevalence of the phyt…
View article: Virome release of an invasive exotic plant species in southern France
Virome release of an invasive exotic plant species in southern France Open
The increase in human-mediated introduction of plant species to new regions has resulted in a rise of invasive exotic plant species (IEPS) that has had significant effects on biodiversity and ecosystem processes. One commonly accepted mech…
View article: Increase of niche filling with increase of host richness for plant-infecting mastreviruses
Increase of niche filling with increase of host richness for plant-infecting mastreviruses Open
Now that it has been realized that viruses are ubiquitous, questions have been raised on factors influencing their diversity and distribution. For phytoviruses, understanding the interplay between plant diversity and virus species richness…
View article: Benchmarking of virome metagenomic analysis approaches using a large, 60+ members, viral synthetic community
Benchmarking of virome metagenomic analysis approaches using a large, 60+ members, viral synthetic community Open
In contrast to microbial metagenomics, there has still been only limited efforts to benchmark performance of virome analysis approaches in terms of faithfulness to community structure and of completeness of virome description. While natura…
View article: Virion-Associated Nucleic Acid-Based Metagenomics: A Decade of Advances in Molecular Characterization of Plant Viruses
Virion-Associated Nucleic Acid-Based Metagenomics: A Decade of Advances in Molecular Characterization of Plant Viruses Open
Over the last decade, viral metagenomic studies have resulted in the discovery of thousands of previously unknown viruses. These studies are likely to play a pivotal role in obtaining an accurate and robust understanding of how viruses aff…
View article: Nanopore Sequencing Is a Credible Alternative to Recover Complete Genomes of Geminiviruses
Nanopore Sequencing Is a Credible Alternative to Recover Complete Genomes of Geminiviruses Open
Next-generation sequencing (NGS), through the implementation of metagenomic protocols, has led to the discovery of thousands of new viruses in the last decade. Nevertheless, these protocols are still laborious and costly to implement, and …
View article: Emergence of Southern Rice Black-Streaked Dwarf Virus in the Centuries-Old Chinese Yuanyang Agrosystem of Rice Landraces
Emergence of Southern Rice Black-Streaked Dwarf Virus in the Centuries-Old Chinese Yuanyang Agrosystem of Rice Landraces Open
Southern rice black-streaked dwarf virus (SRBSDV), which causes severe disease symptoms in rice (Oriza sativa L.) has been emerging in the last decade throughout northern Vietnam, southern Japan and southern, central and eastern China. Her…