Pingfeng Yu
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View article: Heterogeneity in susceptibility of viruses with different structures to various reactive oxygen species: Kinetics and biological mechanisms
Heterogeneity in susceptibility of viruses with different structures to various reactive oxygen species: Kinetics and biological mechanisms Open
Waterborne viruses have caused outbreaks of related diseases and threaten human health, and advanced oxidation processes (AOPs), as clean and efficient technologies, have received widespread attention for their excellent performance in ina…
View article: Harnessing phage consortia to mitigate the soil antibiotic resistome by targeting keystone taxa Streptomyces
Harnessing phage consortia to mitigate the soil antibiotic resistome by targeting keystone taxa Streptomyces Open
Our study demonstrates that some bacterial keystone taxa are critical for ARG maintenance and dissemination in soil microbiomes, and opens new ecological avenues for microbiome modification and resistome control. This study advances our un…
View article: Adaptive modification of antiviral defense systems in microbial community under Cr-induced stress
Adaptive modification of antiviral defense systems in microbial community under Cr-induced stress Open
View article: Unlocking the hidden power: magnetic sludge biochar as a strengthening agent for anammox nitrogen removal advancement and microbial metabolic cooperation
Unlocking the hidden power: magnetic sludge biochar as a strengthening agent for anammox nitrogen removal advancement and microbial metabolic cooperation Open
View article: Seasonal succession, host associations, and biochemical roles of aquatic viruses in a eutrophic lake plagued by cyanobacterial blooms
Seasonal succession, host associations, and biochemical roles of aquatic viruses in a eutrophic lake plagued by cyanobacterial blooms Open
Viruses are implicated to play key roles as biogeochemical mediators and ecological drivers in freshwater ecosystems. However, the dynamics of viruses and host associations throughout the seasons and during blooming periods in eutrophic fr…
View article: Symbiotic bacteriophages exhibit multiple adaptive strategies in activated sludge flocs and contribute to floc stability
Symbiotic bacteriophages exhibit multiple adaptive strategies in activated sludge flocs and contribute to floc stability Open
View article: A panoramic view of the virosphere in three wastewater treatment plants by integrating viral‐like particle‐concentrated and traditional non‐concentrated metagenomic approaches
A panoramic view of the virosphere in three wastewater treatment plants by integrating viral‐like particle‐concentrated and traditional non‐concentrated metagenomic approaches Open
Wastewater biotreatment systems harbor a rich diversity of microorganisms, and the effectiveness of biotreatment systems largely depends on the activity of these microorganisms. Specifically, viruses play a crucial role in altering microbi…
View article: Protective Effects of Antibiotic Resistant Bacteria on Susceptibles in Biofilm: Influential Factors, Mechanism, and Modeling
Protective Effects of Antibiotic Resistant Bacteria on Susceptibles in Biofilm: Influential Factors, Mechanism, and Modeling Open
View article: Seasonal Succession, Host Associations and Biochemical Roles of Aquatic Viruses in a Eutrophic Lake Plagued by Cyanobacterial Blooms
Seasonal Succession, Host Associations and Biochemical Roles of Aquatic Viruses in a Eutrophic Lake Plagued by Cyanobacterial Blooms Open
Background. Viruses are important biogeochemical mediators and ecological drivers in freshwater ecosystems. Although the environmental implications of viruses in ecosystems have been preliminarily explored, the dynamics of viruses and host…
View article: Enhancing the quality and reputation of Soil & Environmental Health journal
Enhancing the quality and reputation of Soil & Environmental Health journal Open
♦ Editorial board members include >100 established scientists from 29 countries; ♦ SEH gains an international reputation as a quality open-access journal; ♦ Various measures to improve the quality of SEH manuscripts; ♦ Various awards to re…
View article: Editorial: Bacteria-phage coevolution in antimicrobial resistance
Editorial: Bacteria-phage coevolution in antimicrobial resistance Open
EDITORIAL article Front. Microbiol., 15 June 2023Sec. Phage Biology Volume 14 - 2023 | https://doi.org/10.3389/fmicb.2023.1221867
View article: The association of prokaryotic antiviral systems and symbiotic phage communities in drinking water microbiomes
The association of prokaryotic antiviral systems and symbiotic phage communities in drinking water microbiomes Open
Prokaryotic antiviral systems are important mediators for prokaryote-phage interactions, which have significant implications for the survival of prokaryotic community. However, the prokaryotic antiviral systems under environmental stress a…
View article: Benzo[a]pyrene stress impacts adaptive strategies and ecological functions of earthworm intestinal viromes
Benzo[a]pyrene stress impacts adaptive strategies and ecological functions of earthworm intestinal viromes Open
The earthworm gut virome influences the structure and function of the gut microbiome, which in turn influences worm health and ecological functions. However, despite its ecological and soil quality implications, it remains elusive how eart…
View article: Inhibition of biofouling on reverse osmosis membrane surfaces by germicidal ultraviolet light side-emitting optical fibers
Inhibition of biofouling on reverse osmosis membrane surfaces by germicidal ultraviolet light side-emitting optical fibers Open
Biofouling of membrane surfaces poses significant operational challenges and costs for desalination and wastewater reuse applications. Ultraviolet (UV) light can control biofilms while reducing chemical usage and disinfection by-products, …
View article: Disinfectant Stress Enhances Prokaryotic Symbiosis with Lysogenic Phages and Defense Systems Against Detrimental Phage Infection
Disinfectant Stress Enhances Prokaryotic Symbiosis with Lysogenic Phages and Defense Systems Against Detrimental Phage Infection Open
Background Mutualistic symbiosis is critical for microbial adaptation to stress and microbiome functions. Recent progress in metagenomics has advanced understanding of prokaryote-phage symbiosis and the ecological and evolutionary signific…
View article: Keystone Genes from Extracellular DNA Facilitate Microbial Adaptation in Organochlorine Pesticide-Contaminated Soil
Keystone Genes from Extracellular DNA Facilitate Microbial Adaptation in Organochlorine Pesticide-Contaminated Soil Open
Background: Keystone genes exert great influence on maintaining microbiome stability and functional recovery irrespective of their environmental abundance. Elucidating the effects of environmental stresses on their variation is vital for i…
View article: Bacterial Concentrations and Water Turbulence Influence the Importance of Conjugation Versus Phage-Mediated Antibiotic Resistance Gene Transfer in Suspended Growth Systems
Bacterial Concentrations and Water Turbulence Influence the Importance of Conjugation Versus Phage-Mediated Antibiotic Resistance Gene Transfer in Suspended Growth Systems Open
Despite the abundance of phage-borne antibiotic resistance genes (ARGs) in the environment, the frequency of ARG propagation via phage-mediated transduction (relative to via conjugation) is poorly understood. We investigated the influence …
View article: Enhanced mutualistic symbiosis between soil phages and bacteria with elevated chromium-induced environmental stress
Enhanced mutualistic symbiosis between soil phages and bacteria with elevated chromium-induced environmental stress Open
View article: Aminoglycosides Antagonize Bacteriophage Proliferation, Attenuating Phage Suppression of Bacterial Growth, Biofilm Formation, and Antibiotic Resistance
Aminoglycosides Antagonize Bacteriophage Proliferation, Attenuating Phage Suppression of Bacterial Growth, Biofilm Formation, and Antibiotic Resistance Open
The coexistence of residual antibiotics and phages is common in many environments, which underscores the need to understand their interactive effects on bacteria and the implications for antibiotic resistance propagation. Here, aminoglycos…
View article: Crystalline Covalent Organic Framework Aerogels
Crystalline Covalent Organic Framework Aerogels Open
Covalent organic frameworks (COFs) are crystalline organic materials of interest for a wide range of applications due to their porosity, tunable architecture, and precise chemistry. However, COFs are typically produced in powder form and a…
View article: Crystalline Covalent Organic Framework Aerogels
Crystalline Covalent Organic Framework Aerogels Open
Covalent organic frameworks (COFs) are crystalline organic materials of interest for a wide range of applications due to their porosity, tunable architecture, and precise chemistry. However, COFs are typically produced in powder form and a…
View article: Enhanced Mutualistic Symbiosis Between Soil Phages and Bacteria With Elevated Chromium-induced Environmental Stress
Enhanced Mutualistic Symbiosis Between Soil Phages and Bacteria With Elevated Chromium-induced Environmental Stress Open
Background: Microbe-virus interactions have broad implications on the composition, function, and evolution of microbiomes. Elucidating effects of environmental stresses on these interactions is critical to identify the ecological function …
View article: Elevated levels of pathogenic indicator bacteria and antibiotic resistance genes after hurricane Harvey’s Flooding in Houston
Elevated levels of pathogenic indicator bacteria and antibiotic resistance genes after hurricane Harvey’s Flooding in Houston Open
Urban flooding can dramatically affect\nthe local microbial landscape\nand increase the risk of waterborne infection in flooded areas. Hurricane\nHarvey, the most destructive hurricane since Katrina in 2005, damaged\nmore than 100000 homes…
View article: Pilot-Scale Pyrolytic Remediation of Crude-Oil-Contaminated Soil in a Continuously-Fed Reactor: Treatment Intensity Trade-Offs
Pilot-Scale Pyrolytic Remediation of Crude-Oil-Contaminated Soil in a Continuously-Fed Reactor: Treatment Intensity Trade-Offs Open
Pyrolytic treatment offers the potential for the rapid remediation of contaminated soils. However, soil fertility restoration can be highly variable, underscoring the need to understand how treatment conditions affect soil detoxification a…
View article: Can single disease payment system based on clinical pathway reduce hospitalization costs in rural area? A case study of uterine leiomyoma in Anhui, China
Can single disease payment system based on clinical pathway reduce hospitalization costs in rural area? A case study of uterine leiomyoma in Anhui, China Open
There existed huge discrepancies in inpatient care for uterine leiomyoma patients. Implementation of CP-based SDP can help not only in controlling hospitalization costs of uterine leiomyoma in county-level hospitals but also in standardizi…
View article: Bacterial Endospores as Phage Genome Carriers and Protective Shells
Bacterial Endospores as Phage Genome Carriers and Protective Shells Open
Bacteriophages are being considered for the control of multidrug-resistant and other problematic bacteria in environmental systems. However, the efficacy of phage-based microbial control is limited by infectivity loss during phage delivery…
View article: 1,4-Dioxane Biodegradation by <i>Mycobacterium dioxanotrophicus</i> PH-06 Is Associated with a Group-6 Soluble Di-Iron Monooxygenase
1,4-Dioxane Biodegradation by <i>Mycobacterium dioxanotrophicus</i> PH-06 Is Associated with a Group-6 Soluble Di-Iron Monooxygenase Open
1,4-Dioxane (dioxane) is a groundwater contaminant of emerging concern for which bioremediation may be a promising strategy. Several bacterial strains can metabolize dioxane or degrade it cometabolically. However, the molecular basis of di…
View article: Isolation of Polyvalent Bacteriophages by Sequential Multiple-Host Approaches
Isolation of Polyvalent Bacteriophages by Sequential Multiple-Host Approaches Open
Many studies on phage biology are based on isolation methods that may inadvertently select for narrow-host-range phages. Consequently, broad-host-range phages, whose ecological significance is largely unexplored, are consistently overlooke…
View article: Dopamine D<sub>1</sub>and D<sub>5</sub>receptors differentially regulate oxidative stress through paraoxonase 2 in kidney cells
Dopamine D<sub>1</sub>and D<sub>5</sub>receptors differentially regulate oxidative stress through paraoxonase 2 in kidney cells Open
We conclude that D1-like receptors inhibit ROS production by altering PON2 distribution in membrane microdomains in the short-term, and by increasing PON2 expression in the long-term.