Raphaël Flores
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Report: Workshop on connecting Knowledge Graphs with BioChatter Open
The workshop on connecting Knowledge Graphs (KGs) with BioChatter convened experts from biology, computer science, and bioinformatics to tackle challenges in integrating and accessing dispersed datasets in plant sciences. The goal was to c…
View article: SyntenyViewer: a comparative genomics-driven translational research tool
SyntenyViewer: a comparative genomics-driven translational research tool Open
SyntenyViewer is a public web-based tool relying on a relational database available at https://urgi.versailles.inrae.fr/synteny delivering comparative genomics data and associated reservoir of conserved genes between angiosperm species for…
Developing infrastructures for FAIR data in plant biology Open
International audience
Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data Open
The Wheat@URGI portal ( https://wheat-urgi.versailles.inra.fr ) has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome sequence produced by the International Wh…
The IWGSC Data repository and wheat data resources hosted at URGI: Overview and perspectives Open
URGI is a genomics and bioinformatics research unit at INRA (French National institute for Agricultural Research) dedicated to plants and crop parasites. We develop and maintain a genomic and genetic Information System called GnpIS that ma…
Improving the « FAIRness » of Inra’s data for plant biology and breeding Open
INRA is involved in several projects (e.g. EU H2020 ELIXIR-Excelerate, n°676559) or global initiatives (e.g. Wheat Initiative, Research Data Alliance) contributing to the development of : (i) community recommandations for data standardisat…
Combined Genomic and Genetic Data Integration of Major Agronomical Traits in Bread Wheat (Triticum aestivum L.) Open
The high resolution integration of bread wheat genetic and genomic resources accumulated during the last decades offers the opportunity to unveil candidate genes driving major agronomical traits to an unprecedented scale. We combined 27 pu…
Findable, Accessible, Interoperable and Reusable data linked to genetic resources for plant biology and breeding at INRA Open
International audience
Reconciling the evolutionary origin of bread wheat (<i>Triticum aestivum</i>) Open
Summary The origin of bread wheat ( Triticum aestivum ; AABBDD ) has been a subject of controversy and of intense debate in the scientific community over the last few decades. In 2015, three articles published in New Phytologist discussed …