Robert E. Van Sciver
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View article: ARL13B-Cerulean rescues <i>Arl13b</i>-null mouse from embryonic lethality and reveals a role for ARL13B in spermatogenesis
ARL13B-Cerulean rescues <i>Arl13b</i>-null mouse from embryonic lethality and reveals a role for ARL13B in spermatogenesis Open
ARL13B is a regulatory GTPase enriched in cilia, making it a popular marker for this organelle. Arl13b hnn/hnn mice lack ARL13B expression, die during midgestation, and exhibit defects in ciliogenesis. The R26Arl13b-Fucci2aR biosensor mous…
View article: A prioritization tool for cilia-associated genes and their <i>in vivo</i> resources unveils new avenues for ciliopathy research
A prioritization tool for cilia-associated genes and their <i>in vivo</i> resources unveils new avenues for ciliopathy research Open
Defects in ciliary signaling or mutations in proteins that localize to primary cilia lead to a class of human diseases known as ciliopathies. Approximately 10% of mammalian genes encode cilia-associated proteins, and a major gap in the cil…
View article: Ciliary ARL13B inhibits developmental kidney cystogenesis in mouse
Ciliary ARL13B inhibits developmental kidney cystogenesis in mouse Open
ARL13B is a small GTPase enriched in cilia. Deletion of Arl13b in mouse kidney results in renal cysts and an associated absence of primary cilia. Similarly, ablation of cilia leads to kidney cysts. To investigate whether ARL13B functions f…
View article: Let’s talk about race: changing the conversations around race in academia
Let’s talk about race: changing the conversations around race in academia Open
Jasmine Miller-Kleinhenz et al. highlight the risk of science and academia’s general neutrality to discussions around race and social justice. Their collectively-developed course represents a framework to begin these important discussions …
View article: Unmet Clinical Need: Developing Prognostic Biomarkers and Precision Medicine to Forecast Early Tumor Relapse, Detect Chemo-Resistance and Improve Overall Survival in High-Risk Breast Cancer
Unmet Clinical Need: Developing Prognostic Biomarkers and Precision Medicine to Forecast Early Tumor Relapse, Detect Chemo-Resistance and Improve Overall Survival in High-Risk Breast Cancer Open
Chemo-resistant breast cancer is a major barrier to curative treatment for a significant number of women with breast cancer. Neoadjuvant chemotherapy (NACT) is standard first- line treatment for most women diagnosed with high-risk TNBC, HE…
View article: The phylogenetic functional conservation of<i>Drosophila</i>Seven-In-Absentia (SINA) E3 ligase and its two human paralogs, SIAH1 and SIAH2, in<i>Drosophila</i>eye development
The phylogenetic functional conservation of<i>Drosophila</i>Seven-In-Absentia (SINA) E3 ligase and its two human paralogs, SIAH1 and SIAH2, in<i>Drosophila</i>eye development Open
Seven-IN-Absentia (SINA) is the most downstream signaling gatekeeper identified thus far in the RAS/EGFR pathway that controls photoreceptor cell fate determination in Drosophila . Underscoring the central importance of SINA is its phyloge…
View article: Abstract 83: The critical role of seven-in-absentia (SINA) family E3 ligases in normal development and oncogenic K-RAS-driven human cancer
Abstract 83: The critical role of seven-in-absentia (SINA) family E3 ligases in normal development and oncogenic K-RAS-driven human cancer Open
There will be an estimated 1.8 million new cancer diagnoses in the US this year alone, with >80% of these cases driven by oncogenic K-RAS/SIAH pathway activation, even in the absence of oncogenic RAS mutations. Over three decades of intens…
View article: A New Strategy to Control and Eradicate “Undruggable” Oncogenic K-RAS-Driven Pancreatic Cancer: Molecular Insights and Core Principles Learned from Developmental and Evolutionary Biology
A New Strategy to Control and Eradicate “Undruggable” Oncogenic K-RAS-Driven Pancreatic Cancer: Molecular Insights and Core Principles Learned from Developmental and Evolutionary Biology Open
Oncogenic K-RAS mutations are found in virtually all pancreatic cancers, making K-RAS one of the most targeted oncoproteins for drug development in cancer therapies. Despite intense research efforts over the past three decades, oncogenic K…
View article: Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Through phylogenetic analyses of metazoan SINA and SIAH E3 ligases, we identified many invariant and divergent amino acid residues, as well as the evolutionarily conserved functional motifs in this medically relevant gene family. Our phylo…
View article: Additional file 6: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 6: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Original alignment for SIAH2 subfamily. 18 vertebrate SIAH2 sequences, no trimmed positions. (FASTA 8 kb)
View article: Additional file 11: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 11: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Refined alignment for SINA subtree. 20 invertebrate SINA sequences, trimmed according to Methods. (FASTA 7 kb)
View article: Additional file 8: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 8: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Refined alignment for SIAH1 subtree. 19 vertebrate SIAH1 sequences, trimmed according to Methods. (FASTA 6 kb)
View article: Additional file 9: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 9: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Refined alignment for SIAH2 subtree. 18 vertebrate SIAH2 sequences, trimmed according to Methods. (FASTA 7 kb)
View article: Additional file 3: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 3: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Original alignment of entire SINA/SIAH database. 70 SINA/SIAH protein sequences, no trimmed positions. (FASTA 37 kb)
View article: Additional file 7: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 7: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Original alignment for SIAH3 subtree. 13 vertebrate SIAH3 sequences, no trimmed positions. (FASTA 4 kb)
View article: Additional file 1: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 1: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Original alignment for SINA subtree. 20 invertebrate SINA sequences, no trimmed positions. (FASTA 11 kb)
View article: Additional file 5: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 5: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Original alignment for SIAH1 subtree. 19 vertebrate SIAH1 sequences, no trimmed positions. (FASTA 6 kb)
View article: Additional file 4: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 4: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Refined alignment of entire SINA/SIAH database. 70 SINA/SIAH sequences, trimmed according to Methods. (FASTA 21 kb)
View article: Additional file 12: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 12: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Output from MEGA7 Model Selection to generate Fig. 1. Excel spreadsheet related to selection of phylogenetic models for Fig. 1 tree, sorted by AICc values. (XLS 525 kb)
View article: Additional file 13: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 13: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Sequence alignment of the four consensus sequences (SINA, SIAH1, SIAH2, SIAH3). Consists of 4 sequences generated from the refined subalignments (see Methods). (FASTA 1 kb)
View article: Additional file 10: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa
Additional file 10: of Phylogenetic analysis of the SINA/SIAH ubiquitin E3 ligase family in Metazoa Open
Refined alignment for SIAH3 subtree. 13 vertebrate SIAH3 sequences, trimmed according to Methods. (FASTA 4 kb)
View article: C0 and C1 N-terminal Ig domains of myosin binding protein C exert different effects on thin filament activation
C0 and C1 N-terminal Ig domains of myosin binding protein C exert different effects on thin filament activation Open
Significance Cardiac myosin binding protein C (cMyBP-C) is a regulatory protein that modulates the strength and speed of heart contractions. cMyBP-C is required for normal heart function, and mutations in the gene encoding cMyBP-C are the …