Robert Pergl
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View article: Machine-Actionability and Evolvability in Data Stewardship Planning: Framework, Implementation, and Case Study
Machine-Actionability and Evolvability in Data Stewardship Planning: Framework, Implementation, and Case Study Open
Ensuring the evolvability of data stewardship planning is a critical challenge, particularly in environments where requirements frequently change. Traditional data management plans (DMPs) often lack modularity, adaptability, and machine-ac…
View article: ELIXIR-CONVERGE D9.3 Best practices documents on data standards - relates to task 9.3
ELIXIR-CONVERGE D9.3 Best practices documents on data standards - relates to task 9.3 Open
This deliverable pertains to task 9.3, which is dedicated to the establishment of data standards for SARS-CoV-2 variants and lineages. It plays a crucial role in the development of a network of specialised data experts in SARS-CoV-2 genomi…
View article: Common Minimum Metadata for FAIR Semantic Artefacts
Common Minimum Metadata for FAIR Semantic Artefacts Open
International audience
View article: ELIXIR-CONVERGE D3.5 Extended toolkit
ELIXIR-CONVERGE D3.5 Extended toolkit Open
The scope of Deliverable D3.5 is two-fold: firstly, the extension of the content of the WP3 data management toolkit, known as RDMkit, based on the second wave of demonstrator use cases from WP5; and secondly, the harmonisation of the conte…
View article: ELIXIR-CONVERGE D9.2 Document where code from the various regional/national data hubs is available; training documentation on data submission by the platforms - relates to tasks 9.1-9.2
ELIXIR-CONVERGE D9.2 Document where code from the various regional/national data hubs is available; training documentation on data submission by the platforms - relates to tasks 9.1-9.2 Open
Deliverable 9.2 relates to tasks 9.1 and 9.2 on strengthening the central Covid-19 Data Portal and coordinating nascent and established data hubs in mobilising data into the central portal. To achieve this, an active network of regional an…
View article: FAIR Data Entry Tool Report
FAIR Data Entry Tool Report Open
FAIR Data Entry Tool is a complete solution for capturing bioinformatic metadata described by a given ontology. The questionnaire for collecting the data is generated based on the OWL model. Therefore, the data is collected in a machine-ac…
View article: Data Stewardship Wizard
Data Stewardship Wizard Open
Data Stewardship Wizard is a tool that facilitates the process of Data Management Planning / Data Stewardship Planning with a focus on the benefit to the research at hand.
View article: Towards a Toolbox for Automated Assessment of Machine-Actionable Data Management Plans
Towards a Toolbox for Automated Assessment of Machine-Actionable Data Management Plans Open
Most research funders require Data Management Plans (DMPs). The review process can be time consuming, since reviewers read text documents submitted by researchers and provide their feedback. Moreover, it requires specific expert knowledge …
View article: D2.8 FAIR Semantics Recommendations Third Iteration
D2.8 FAIR Semantics Recommendations Third Iteration Open
This document is the third and final iteration of recommendations for making semantic artefacts FAIR. These recommendations result from continuous discussions with semantic experts from multiple communities. Our previous work included 17 p…
View article: D2.8 FAIR Semantics Recommendations Third Iteration
D2.8 FAIR Semantics Recommendations Third Iteration Open
This document is the third and final iteration of recommendations for making semantic artefacts FAIR. These recommendations result from continuous discussions with semantic experts from multiple communities. Our previous work included 17 p…
View article: ELIXIR-CONVERGE D3.1 Assembled starter toolkit
ELIXIR-CONVERGE D3.1 Assembled starter toolkit Open
An ELIXIR Common Data Management Toolkit is intended to support researchers and data stewards to enable lifecycle management for their research data, according to international standards, and integrated in the national context. The goal is…
View article: Reusable FAIR Implementation Profiles as Accelerators of FAIR Convergence
Reusable FAIR Implementation Profiles as Accelerators of FAIR Convergence Open
Powerful incentives are driving the adoption of FAIR practices among a broad cross-section of stakeholders. This adoption process must factor in numerous considerations regarding the use of both domain-specific and infrastructural resource…
View article: FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources
FAIR Convergence Matrix: Optimizing the Reuse of Existing FAIR-Related Resources Open
The FAIR principles articulate the behaviors expected from digital artifacts that are Findable, Accessible, Interoperable and Reusable by machines and by people. Although by now widely accepted, the FAIR Principles by design do not explici…
View article: Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data
Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data Open
Thousands of community-developed (meta)data guidelines, models, ontologies, schemas and formats have been created and implemented by several thousand data repositories and knowledge-bases, across all disciplines. These resources are necess…
View article: Data Management Planning: How Requirements and Solutions are Beginning to Converge
Data Management Planning: How Requirements and Solutions are Beginning to Converge Open
Effective stewardship of data is a critical precursor to making data FAIR. The goal of this paper is to bring an overview of current state of the art of data management and data stewardship planning solutions (DMP). We begin by arguing why…
View article: FAIR Principles: Interpretations and Implementation Considerations
FAIR Principles: Interpretations and Implementation Considerations Open
The FAIR principles have been widely cited, endorsed and adopted by a broad range of stakeholders since their publication in 2016. By intention, the 15 FAIR guiding principles do not dictate specific technological implementations, but prov…
View article: Generating UML Models with Inferred Types from Pharo Code
Generating UML Models with Inferred Types from Pharo Code Open
International audience
View article: The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data
The FAIR Funder pilot programme to make it easy for funders to require and for grantees to produce FAIR Data Open
There is a growing acknowledgement in the scientific community of the importance of making experimental data machine findable, accessible, interoperable, and reusable (FAIR). Recognizing that high quality metadata are essential to make dat…